RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 MT1EP04732 61 aa5.97□□□□□ -1.45
TRAF3IP1-201ENST00000373327 LOC100996750A0A140TA64 210 aa5.97□□□□□ -1.45
TRAF3IP1-201ENST00000373327 MUC12Q9UKN1 5478 aa5.96□□□□□ -1.46
TRAF3IP1-201ENST00000373327 KRTAP9-6A8MVA2 160 aa5.91□□□□□ -1.46
TRAF3IP1-201ENST00000373327 SYNE2Q8WXH0 6885 aaKnown RBP5.89□□□□□ -1.47
TRAF3IP1-201ENST00000373327 SSPOA2VEC9 5147 aa5.88□□□□□ -1.47
TRAF3IP1-201ENST00000373327 LCE3BQ5TA77 95 aa5.85□□□□□ -1.47
TRAF3IP1-201ENST00000373327 KRTAP19-6Q3LI70 58 aa5.74□□□□□ -1.49
TRAF3IP1-201ENST00000373327 KRTAP19-3Q7Z4W3 81 aa5.74□□□□□ -1.49
TRAF3IP1-201ENST00000373327 MT1MQ8N339 61 aa5.68□□□□□ -1.5
TRAF3IP1-201ENST00000373327 KRTAP12-4P60329 112 aa5.67□□□□□ -1.5
TRAF3IP1-201ENST00000373327 SPRR2EP22531 72 aa5.61□□□□□ -1.51
TRAF3IP1-201ENST00000373327 SPRR2BP35325 72 aa5.61□□□□□ -1.51
TRAF3IP1-201ENST00000373327 SPRR2AP35326 72 aa5.61□□□□□ -1.51
TRAF3IP1-201ENST00000373327 MACF1Q9UPN3 7388 aaKnown RBP5.6□□□□□ -1.51
TRAF3IP1-201ENST00000373327 KRTAP19-4Q3LI73 84 aa5.58□□□□□ -1.52
TRAF3IP1-201ENST00000373327 LCE2DQ5TA82 110 aaPredicted RBP5.51□□□□□ -1.53
TRAF3IP1-201ENST00000373327 KRTAP4-9Q9BYQ8 210 aa5.51□□□□□ -1.53
TRAF3IP1-201ENST00000373327 KRTAP2-3P0C7H8 128 aa5.47□□□□□ -1.53
TRAF3IP1-201ENST00000373327 KRTAP2-4Q9BYR9 128 aa5.47□□□□□ -1.53
TRAF3IP1-201ENST00000373327 KRTAP2-1Q9BYU5 128 aa5.47□□□□□ -1.53
TRAF3IP1-201ENST00000373327 KRTAP9-2Q9BYQ4 174 aa5.43□□□□□ -1.54
TRAF3IP1-201ENST00000373327 SPRR2DP22532 72 aa5.35□□□□□ -1.55
TRAF3IP1-201ENST00000373327 LCE3DQ9BYE3 92 aa5.3□□□□□ -1.56
TRAF3IP1-201ENST00000373327 MDN1Q9NU22 5596 aa5.24□□□□□ -1.57
TRAF3IP1-201ENST00000373327 LCE5AQ5TCM9 118 aa5.23□□□□□ -1.57
TRAF3IP1-201ENST00000373327 KRTAP6-1Q3LI64 71 aa5.19□□□□□ -1.58
TRAF3IP1-201ENST00000373327 LCE3EQ5T5B0 92 aa5.17□□□□□ -1.58
TRAF3IP1-201ENST00000373327 LCE1AQ5T7P2 110 aa5.08□□□□□ -1.6
TRAF3IP1-201ENST00000373327 MT1AP04731 61 aa5.04□□□□□ -1.6
TRAF3IP1-201ENST00000373327 PRM1P04553 51 aa4.99□□□□□ -1.61
TRAF3IP1-201ENST00000373327 MT4P47944 62 aa4.98□□□□□ -1.61
TRAF3IP1-201ENST00000373327 KRTAP9-7A8MTY7 169 aa4.87□□□□□ -1.63
TRAF3IP1-201ENST00000373327 KRTAP6-2Q3LI66 62 aa4.85□□□□□ -1.63
TRAF3IP1-201ENST00000373327 MT3P25713 68 aa4.84□□□□□ -1.63
TRAF3IP1-201ENST00000373327 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.77□□□□□ -1.65
TRAF3IP1-201ENST00000373327 MUC19Q7Z5P9 8384 aa4.75□□□□□ -1.65
TRAF3IP1-201ENST00000373327 KRTAP9-6A0A140TA67 174 aa4.75□□□□□ -1.65
TRAF3IP1-201ENST00000373327 KRTAP9-4Q9BYQ2 154 aa4.7□□□□□ -1.66
TRAF3IP1-201ENST00000373327 KRTAP5-9P26371 169 aa4.63□□□□□ -1.67
TRAF3IP1-201ENST00000373327 KRTAP6-3Q3LI67 103 aa4.62□□□□□ -1.67
TRAF3IP1-201ENST00000373327 LCE1DQ5T752 114 aa4.6□□□□□ -1.67
TRAF3IP1-201ENST00000373327 LCE1BQ5T7P3 118 aa4.55□□□□□ -1.68
TRAF3IP1-201ENST00000373327 KRTAP4-6Q9BYQ5 205 aa4.44□□□□□ -1.7
TRAF3IP1-201ENST00000373327 NEBP20929 6669 aa4.37□□□□□ -1.71
TRAF3IP1-201ENST00000373327 KRTAP5-5Q701N2 237 aaPredicted RBP4.35□□□□□ -1.71
TRAF3IP1-201ENST00000373327 KRTAP20-1Q3LI63 56 aa4.13□□□□□ -1.75
TRAF3IP1-201ENST00000373327 LCE4AQ5TA78 99 aa4.13□□□□□ -1.75
TRAF3IP1-201ENST00000373327 KRTAP2-2Q9BYT5 123 aa4.13□□□□□ -1.75
TRAF3IP1-201ENST00000373327 KRTAP20-2Q3LI61 65 aa4.11□□□□□ -1.75
TRAF3IP1-201ENST00000373327 MUC5ACP98088 5654 aa4.05□□□□□ -1.76
TRAF3IP1-201ENST00000373327 HMCN1Q96RW7 5635 aa4□□□□□ -1.77
TRAF3IP1-201ENST00000373327 KRTAP4-11Q9BYQ6 195 aa3.87□□□□□ -1.79
TRAF3IP1-201ENST00000373327 KRTAP5-4Q6L8H1 288 aa3.83□□□□□ -1.8
TRAF3IP1-201ENST00000373327 KRTAP4-4Q9BYR3 166 aa3.65□□□□□ -1.83
TRAF3IP1-201ENST00000373327 LCE1CQ5T751 118 aa3.56□□□□□ -1.84
TRAF3IP1-201ENST00000373327 LCE1EQ5T753 118 aa3.56□□□□□ -1.84
TRAF3IP1-201ENST00000373327 LCE1FQ5T754 118 aa3.56□□□□□ -1.84
TRAF3IP1-201ENST00000373327 KRTAP4-12Q9BQ66 201 aa3.52□□□□□ -1.85
TRAF3IP1-201ENST00000373327 KRTAP4-2Q9BYR5 136 aa3.52□□□□□ -1.85
TRAF3IP1-201ENST00000373327 GPR98Q8WXG9 6306 aa3.51□□□□□ -1.85
TRAF3IP1-201ENST00000373327 KRTAP5-2Q701N4 177 aa3.5□□□□□ -1.85
TRAF3IP1-201ENST00000373327 KRTAP5-3Q6L8H2 238 aa3.49□□□□□ -1.85
TRAF3IP1-201ENST00000373327 AHNAK2Q8IVF2 5795 aa3.42□□□□□ -1.86
TRAF3IP1-201ENST00000373327 KRTAP5-10Q6L8G5 202 aa3.33□□□□□ -1.88
TRAF3IP1-201ENST00000373327 MUC5BQ9HC84 5762 aaPredicted RBP3.3□□□□□ -1.88
TRAF3IP1-201ENST00000373327 KRTAP9-9Q9BYP9 154 aa3.24□□□□□ -1.89
TRAF3IP1-201ENST00000373327 KRTAP5-8O75690 187 aa3.16□□□□□ -1.9
TRAF3IP1-201ENST00000373327 KRTAP5-1Q6L8H4 278 aa3.15□□□□□ -1.91
TRAF3IP1-201ENST00000373327 KRTAP21-2Q3LI59 83 aa3.01□□□□□ -1.93
TRAF3IP1-201ENST00000373327 AHNAKQ09666 5890 aaKnown RBP2.8□□□□□ -1.96
TRAF3IP1-201ENST00000373327 KRTAP5-11Q6L8G4 156 aa2.73□□□□□ -1.97
TRAF3IP1-201ENST00000373327 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.68□□□□□ -1.98
TRAF3IP1-201ENST00000373327 KRTAP21-1Q3LI58 79 aa2.49□□□□□ -2.01
TRAF3IP1-201ENST00000373327 KRTAP5-7Q6L8G8 165 aa2.48□□□□□ -2.01
TRAF3IP1-201ENST00000373327 PHGR1C9JFL3 82 aa2.39□□□□□ -2.03
TRAF3IP1-201ENST00000373327 MUC16Q8WXI7 14507 aa1.56□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 77.6 ms