RNA–Protein interactions for RNA: ENST00000372972.6

CSTF2-201, Transcript of cleavage stimulation factor subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF2, Length 1,958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-201ENST00000372972 MT1EP04732 61 aa4.75□□□□□ -1.65
CSTF2-201ENST00000372972 KRTAP4-12Q9BQ66 201 aa4.75□□□□□ -1.65
CSTF2-201ENST00000372972 LCE3BQ5TA77 95 aa4.74□□□□□ -1.65
CSTF2-201ENST00000372972 LCE4AQ5TA78 99 aa4.71□□□□□ -1.66
CSTF2-201ENST00000372972 MT1LQ93083 61 aa4.71□□□□□ -1.66
CSTF2-201ENST00000372972 KRTAP9-7A8MTY7 169 aa4.69□□□□□ -1.66
CSTF2-201ENST00000372972 KRTAP4-7Q9BYR0 210 aa4.64□□□□□ -1.67
CSTF2-201ENST00000372972 KRTAP9-9Q9BYP9 154 aa4.61□□□□□ -1.67
CSTF2-201ENST00000372972 KRTAP9-4Q9BYQ2 154 aa4.61□□□□□ -1.67
CSTF2-201ENST00000372972 KRTAP9-6A8MVA2 160 aa4.6□□□□□ -1.67
CSTF2-201ENST00000372972 MACF1Q9UPN3 7388 aaKnown RBP4.59□□□□□ -1.67
CSTF2-201ENST00000372972 SPRR2FQ96RM1 72 aa4.57□□□□□ -1.68
CSTF2-201ENST00000372972 KRTAP19-3Q7Z4W3 81 aa4.51□□□□□ -1.69
CSTF2-201ENST00000372972 MUC12Q9UKN1 5478 aa4.51□□□□□ -1.69
CSTF2-201ENST00000372972 MT1GP13640 62 aa4.5□□□□□ -1.69
CSTF2-201ENST00000372972 KRTAP5-9P26371 169 aa4.47□□□□□ -1.69
CSTF2-201ENST00000372972 LCE1DQ5T752 114 aa4.45□□□□□ -1.7
CSTF2-201ENST00000372972 MT1MQ8N339 61 aa4.45□□□□□ -1.7
CSTF2-201ENST00000372972 SYNE2Q8WXH0 6885 aaKnown RBP4.45□□□□□ -1.7
CSTF2-201ENST00000372972 LCE5AQ5TCM9 118 aa4.42□□□□□ -1.7
CSTF2-201ENST00000372972 KRTAP4-3Q9BYR4 195 aa4.42□□□□□ -1.7
CSTF2-201ENST00000372972 KRTAP2-3P0C7H8 128 aa4.38□□□□□ -1.71
CSTF2-201ENST00000372972 KRTAP2-4Q9BYR9 128 aa4.38□□□□□ -1.71
CSTF2-201ENST00000372972 KRTAP2-1Q9BYU5 128 aa4.38□□□□□ -1.71
CSTF2-201ENST00000372972 KRTAP4-9Q9BYQ8 210 aa4.36□□□□□ -1.71
CSTF2-201ENST00000372972 LCE1AQ5T7P2 110 aa4.36□□□□□ -1.71
CSTF2-201ENST00000372972 KRTAP6-3Q3LI67 103 aa4.35□□□□□ -1.71
CSTF2-201ENST00000372972 INE1O15225 51 aa4.34□□□□□ -1.71
CSTF2-201ENST00000372972 SPRR2EP22531 72 aa4.31□□□□□ -1.72
CSTF2-201ENST00000372972 SPRR2BP35325 72 aa4.31□□□□□ -1.72
CSTF2-201ENST00000372972 SPRR2AP35326 72 aa4.31□□□□□ -1.72
CSTF2-201ENST00000372972 KRTAP4-2Q9BYR5 136 aa4.31□□□□□ -1.72
CSTF2-201ENST00000372972 MDN1Q9NU22 5596 aa4.29□□□□□ -1.72
CSTF2-201ENST00000372972 DSTQ03001 7570 aaKnown RBP4.2□□□□□ -1.74
CSTF2-201ENST00000372972 SPRR2DP22532 72 aa4.15□□□□□ -1.74
CSTF2-201ENST00000372972 KRTAP4-11Q9BYQ6 195 aa4.13□□□□□ -1.75
CSTF2-201ENST00000372972 KRTAP5-3Q6L8H2 238 aa4.11□□□□□ -1.75
CSTF2-201ENST00000372972 NEBP20929 6669 aa4□□□□□ -1.77
CSTF2-201ENST00000372972 MT1AP04731 61 aa3.98□□□□□ -1.77
CSTF2-201ENST00000372972 KRTAP5-5Q701N2 237 aaPredicted RBP3.98□□□□□ -1.77
CSTF2-201ENST00000372972 KRTAP6-1Q3LI64 71 aa3.97□□□□□ -1.77
CSTF2-201ENST00000372972 SYNE1Q8NF91 8797 aaKnown RBP3.83□□□□□ -1.8
CSTF2-201ENST00000372972 KRTAP12-4P60329 112 aa3.8□□□□□ -1.8
CSTF2-201ENST00000372972 KRTAP5-4Q6L8H1 288 aa3.76□□□□□ -1.81
CSTF2-201ENST00000372972 KRTAP2-2Q9BYT5 123 aa3.71□□□□□ -1.82
CSTF2-201ENST00000372972 KRTAP20-1Q3LI63 56 aa3.7□□□□□ -1.82
CSTF2-201ENST00000372972 LCE3DQ9BYE3 92 aa3.69□□□□□ -1.82
CSTF2-201ENST00000372972 MT4P47944 62 aa3.62□□□□□ -1.83
CSTF2-201ENST00000372972 LCE3EQ5T5B0 92 aa3.62□□□□□ -1.83
CSTF2-201ENST00000372972 MT3P25713 68 aa3.61□□□□□ -1.83
CSTF2-201ENST00000372972 KRTAP6-2Q3LI66 62 aa3.61□□□□□ -1.83
CSTF2-201ENST00000372972 KRTAP20-2Q3LI61 65 aa3.52□□□□□ -1.85
CSTF2-201ENST00000372972 HMCN1Q96RW7 5635 aa3.45□□□□□ -1.86
CSTF2-201ENST00000372972 KRTAP5-2Q701N4 177 aa3.42□□□□□ -1.86
CSTF2-201ENST00000372972 OBSCNQ5VST9 7968 aa3.34□□□□□ -1.87
CSTF2-201ENST00000372972 PRM1P04553 51 aa3.31□□□□□ -1.88
CSTF2-201ENST00000372972 LCE1FQ5T754 118 aa3.27□□□□□ -1.89
CSTF2-201ENST00000372972 GPR98Q8WXG9 6306 aa3.24□□□□□ -1.89
CSTF2-201ENST00000372972 LCE1EQ5T753 118 aa3.05□□□□□ -1.92
CSTF2-201ENST00000372972 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.04□□□□□ -1.92
CSTF2-201ENST00000372972 AHNAK2Q8IVF2 5795 aa3.01□□□□□ -1.93
CSTF2-201ENST00000372972 KRTAP5-1Q6L8H4 278 aa2.96□□□□□ -1.94
CSTF2-201ENST00000372972 MUC5ACP98088 5654 aa2.95□□□□□ -1.94
CSTF2-201ENST00000372972 KRTAP5-8O75690 187 aa2.91□□□□□ -1.94
CSTF2-201ENST00000372972 LCE1BQ5T7P3 118 aa2.91□□□□□ -1.94
CSTF2-201ENST00000372972 KRTAP5-10Q6L8G5 202 aa2.89□□□□□ -1.95
CSTF2-201ENST00000372972 LCE1CQ5T751 118 aa2.85□□□□□ -1.95
CSTF2-201ENST00000372972 KRTAP5-7Q6L8G8 165 aa2.82□□□□□ -1.96
CSTF2-201ENST00000372972 KRTAP5-11Q6L8G4 156 aa2.75□□□□□ -1.97
CSTF2-201ENST00000372972 KRTAP21-2Q3LI59 83 aa2.6□□□□□ -1.99
CSTF2-201ENST00000372972 AHNAKQ09666 5890 aaKnown RBP2.48□□□□□ -2.01
CSTF2-201ENST00000372972 MUC5BQ9HC84 5762 aaPredicted RBP2.47□□□□□ -2.01
CSTF2-201ENST00000372972 KRTAP4-4Q9BYR3 166 aa2.47□□□□□ -2.01
CSTF2-201ENST00000372972 PHGR1C9JFL3 82 aa2.16□□□□□ -2.06
CSTF2-201ENST00000372972 KRTAP21-1Q3LI58 79 aa2.07□□□□□ -2.08
CSTF2-201ENST00000372972 MUC19Q7Z5P9 8384 aa2.02□□□□□ -2.09
CSTF2-201ENST00000372972 MUC16Q8WXI7 14507 aa1.44□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 173.7 ms