RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 FSIP2Q5CZC0 6907 aa4.19□□□□□ -1.74
CTPS1-202ENST00000372621 FCGBPQ9Y6R7 5405 aaPredicted RBP4.17□□□□□ -1.74
CTPS1-202ENST00000372621 KRTAP4-3Q9BYR4 195 aa4.16□□□□□ -1.74
CTPS1-202ENST00000372621 LOC100996750A0A140TA64 210 aa4.15□□□□□ -1.75
CTPS1-202ENST00000372621 MUC12Q9UKN1 5478 aa4.12□□□□□ -1.75
CTPS1-202ENST00000372621 MT1MQ8N339 61 aa4.12□□□□□ -1.75
CTPS1-202ENST00000372621 KRTAP19-3Q7Z4W3 81 aa4.11□□□□□ -1.75
CTPS1-202ENST00000372621 MT1GP13640 62 aa4.1□□□□□ -1.75
CTPS1-202ENST00000372621 LCE5AQ5TCM9 118 aa3.99□□□□□ -1.77
CTPS1-202ENST00000372621 CRCT1Q9UGL9 99 aa3.94□□□□□ -1.78
CTPS1-202ENST00000372621 DSTQ03001 7570 aaKnown RBP3.91□□□□□ -1.78
CTPS1-202ENST00000372621 SPRR2FQ96RM1 72 aa3.9□□□□□ -1.79
CTPS1-202ENST00000372621 MACF1Q9UPN3 7388 aaKnown RBP3.88□□□□□ -1.79
CTPS1-202ENST00000372621 KRTAP12-4P60329 112 aa3.85□□□□□ -1.79
CTPS1-202ENST00000372621 LCE3BQ5TA77 95 aa3.78□□□□□ -1.8
CTPS1-202ENST00000372621 MT1AP04731 61 aa3.74□□□□□ -1.81
CTPS1-202ENST00000372621 SYNE2Q8WXH0 6885 aaKnown RBP3.74□□□□□ -1.81
CTPS1-202ENST00000372621 KRTAP6-1Q3LI64 71 aa3.74□□□□□ -1.81
CTPS1-202ENST00000372621 MDN1Q9NU22 5596 aa3.73□□□□□ -1.81
CTPS1-202ENST00000372621 KRTAP4-9Q9BYQ8 210 aa3.72□□□□□ -1.81
CTPS1-202ENST00000372621 LCE1AQ5T7P2 110 aa3.67□□□□□ -1.82
CTPS1-202ENST00000372621 KRTAP5-5Q701N2 237 aaPredicted RBP3.67□□□□□ -1.82
CTPS1-202ENST00000372621 KRTAP5-9P26371 169 aa3.67□□□□□ -1.82
CTPS1-202ENST00000372621 SYNE1Q8NF91 8797 aaKnown RBP3.63□□□□□ -1.83
CTPS1-202ENST00000372621 LCE3DQ9BYE3 92 aa3.59□□□□□ -1.83
CTPS1-202ENST00000372621 KRTAP9-2Q9BYQ4 174 aa3.59□□□□□ -1.84
CTPS1-202ENST00000372621 LCE3EQ5T5B0 92 aa3.55□□□□□ -1.84
CTPS1-202ENST00000372621 SPRR2EP22531 72 aa3.53□□□□□ -1.84
CTPS1-202ENST00000372621 SPRR2BP35325 72 aa3.53□□□□□ -1.84
CTPS1-202ENST00000372621 SPRR2AP35326 72 aa3.53□□□□□ -1.84
CTPS1-202ENST00000372621 OBSCNQ5VST9 7968 aa3.5□□□□□ -1.85
CTPS1-202ENST00000372621 KRTAP9-4Q9BYQ2 154 aa3.49□□□□□ -1.85
CTPS1-202ENST00000372621 KRTAP9-7A8MTY7 169 aa3.46□□□□□ -1.86
CTPS1-202ENST00000372621 PRM1P04553 51 aa3.41□□□□□ -1.86
CTPS1-202ENST00000372621 SPRR2DP22532 72 aa3.38□□□□□ -1.87
CTPS1-202ENST00000372621 KRTAP6-2Q3LI66 62 aa3.34□□□□□ -1.88
CTPS1-202ENST00000372621 MT3P25713 68 aa3.31□□□□□ -1.88
CTPS1-202ENST00000372621 KRTAP6-3Q3LI67 103 aa3.29□□□□□ -1.88
CTPS1-202ENST00000372621 LCE4AQ5TA78 99 aa3.25□□□□□ -1.89
CTPS1-202ENST00000372621 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.22□□□□□ -1.89
CTPS1-202ENST00000372621 KRTAP5-4Q6L8H1 288 aa3.21□□□□□ -1.9
CTPS1-202ENST00000372621 KRTAP9-6A0A140TA67 174 aa3.17□□□□□ -1.9
CTPS1-202ENST00000372621 NEBP20929 6669 aa3.11□□□□□ -1.91
CTPS1-202ENST00000372621 KRTAP9-9Q9BYP9 154 aa3.04□□□□□ -1.92
CTPS1-202ENST00000372621 KRTAP4-6Q9BYQ5 205 aa3.04□□□□□ -1.92
CTPS1-202ENST00000372621 KRTAP2-2Q9BYT5 123 aa3.02□□□□□ -1.93
CTPS1-202ENST00000372621 KRTAP5-2Q701N4 177 aa3.01□□□□□ -1.93
CTPS1-202ENST00000372621 KRTAP4-12Q9BQ66 201 aa2.99□□□□□ -1.93
CTPS1-202ENST00000372621 KRTAP20-2Q3LI61 65 aa2.98□□□□□ -1.93
CTPS1-202ENST00000372621 MT4P47944 62 aa2.97□□□□□ -1.93
CTPS1-202ENST00000372621 HMCN1Q96RW7 5635 aa2.89□□□□□ -1.95
CTPS1-202ENST00000372621 KRTAP5-3Q6L8H2 238 aa2.86□□□□□ -1.95
CTPS1-202ENST00000372621 MUC5ACP98088 5654 aa2.83□□□□□ -1.96
CTPS1-202ENST00000372621 LCE1DQ5T752 114 aa2.81□□□□□ -1.96
CTPS1-202ENST00000372621 KRTAP20-1Q3LI63 56 aa2.8□□□□□ -1.96
CTPS1-202ENST00000372621 LCE1EQ5T753 118 aa2.73□□□□□ -1.97
CTPS1-202ENST00000372621 KRTAP5-10Q6L8G5 202 aa2.66□□□□□ -1.98
CTPS1-202ENST00000372621 KRTAP5-1Q6L8H4 278 aa2.65□□□□□ -1.99
CTPS1-202ENST00000372621 LCE1BQ5T7P3 118 aa2.63□□□□□ -1.99
CTPS1-202ENST00000372621 KRTAP4-2Q9BYR5 136 aa2.59□□□□□ -2
CTPS1-202ENST00000372621 LCE1CQ5T751 118 aa2.58□□□□□ -2
CTPS1-202ENST00000372621 KRTAP4-11Q9BYQ6 195 aa2.56□□□□□ -2
CTPS1-202ENST00000372621 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.46□□□□□ -2.02
CTPS1-202ENST00000372621 MUC19Q7Z5P9 8384 aa2.45□□□□□ -2.02
CTPS1-202ENST00000372621 KRTAP21-2Q3LI59 83 aa2.44□□□□□ -2.02
CTPS1-202ENST00000372621 LCE1FQ5T754 118 aa2.41□□□□□ -2.02
CTPS1-202ENST00000372621 KRTAP5-7Q6L8G8 165 aa2.36□□□□□ -2.03
CTPS1-202ENST00000372621 KRTAP5-8O75690 187 aa2.35□□□□□ -2.03
CTPS1-202ENST00000372621 GPR98Q8WXG9 6306 aa2.33□□□□□ -2.04
CTPS1-202ENST00000372621 AHNAK2Q8IVF2 5795 aa2.25□□□□□ -2.05
CTPS1-202ENST00000372621 KRTAP5-11Q6L8G4 156 aa2.21□□□□□ -2.06
CTPS1-202ENST00000372621 KRTAP21-1Q3LI58 79 aa2.19□□□□□ -2.06
CTPS1-202ENST00000372621 KRTAP4-4Q9BYR3 166 aa2.17□□□□□ -2.06
CTPS1-202ENST00000372621 MUC5BQ9HC84 5762 aaPredicted RBP2.1□□□□□ -2.07
CTPS1-202ENST00000372621 PHGR1C9JFL3 82 aa1.91□□□□□ -2.1
CTPS1-202ENST00000372621 AHNAKQ09666 5890 aaKnown RBP1.76□□□□□ -2.13
CTPS1-202ENST00000372621 MUC16Q8WXI7 14507 aa1.3□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 95.5 ms