RNA–Protein interactions for RNA: ENST00000372595.5

SCMH1-205, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SCMH1, Length 3,231 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-205ENST00000372595 MUC12Q9UKN1 5478 aa3□□□□□ -1.93
SCMH1-205ENST00000372595 CRCT1Q9UGL9 99 aa3□□□□□ -1.93
SCMH1-205ENST00000372595 KRTAP4-3Q9BYR4 195 aa2.99□□□□□ -1.93
SCMH1-205ENST00000372595 FCGBPQ9Y6R7 5405 aaPredicted RBP2.99□□□□□ -1.93
SCMH1-205ENST00000372595 LOC100996750A0A140TA64 210 aa2.96□□□□□ -1.94
SCMH1-205ENST00000372595 KRTAP19-4Q3LI73 84 aa2.96□□□□□ -1.94
SCMH1-205ENST00000372595 MT1GP13640 62 aa2.95□□□□□ -1.94
SCMH1-205ENST00000372595 LCE5AQ5TCM9 118 aa2.93□□□□□ -1.94
SCMH1-205ENST00000372595 KRTAP19-3Q7Z4W3 81 aa2.9□□□□□ -1.94
SCMH1-205ENST00000372595 DSTQ03001 7570 aaKnown RBP2.9□□□□□ -1.95
SCMH1-205ENST00000372595 SPRR2FQ96RM1 72 aa2.9□□□□□ -1.95
SCMH1-205ENST00000372595 MT1MQ8N339 61 aa2.89□□□□□ -1.95
SCMH1-205ENST00000372595 KRTAP9-4Q9BYQ2 154 aa2.87□□□□□ -1.95
SCMH1-205ENST00000372595 KRTAP12-4P60329 112 aa2.83□□□□□ -1.96
SCMH1-205ENST00000372595 KRTAP9-2Q9BYQ4 174 aa2.83□□□□□ -1.96
SCMH1-205ENST00000372595 OBSCNQ5VST9 7968 aa2.82□□□□□ -1.96
SCMH1-205ENST00000372595 KRTAP9-6A0A140TA67 174 aa2.82□□□□□ -1.96
SCMH1-205ENST00000372595 MACF1Q9UPN3 7388 aaKnown RBP2.79□□□□□ -1.96
SCMH1-205ENST00000372595 SYNE1Q8NF91 8797 aaKnown RBP2.79□□□□□ -1.96
SCMH1-205ENST00000372595 LCE1FQ5T754 118 aa2.76□□□□□ -1.97
SCMH1-205ENST00000372595 KRTAP9-9Q9BYP9 154 aa2.76□□□□□ -1.97
SCMH1-205ENST00000372595 LCE4AQ5TA78 99 aa2.75□□□□□ -1.97
SCMH1-205ENST00000372595 SYNE2Q8WXH0 6885 aaKnown RBP2.74□□□□□ -1.97
SCMH1-205ENST00000372595 LCE3BQ5TA77 95 aa2.74□□□□□ -1.97
SCMH1-205ENST00000372595 MDN1Q9NU22 5596 aa2.71□□□□□ -1.98
SCMH1-205ENST00000372595 KRTAP2-2Q9BYT5 123 aa2.71□□□□□ -1.98
SCMH1-205ENST00000372595 KRTAP9-7A8MTY7 169 aa2.7□□□□□ -1.98
SCMH1-205ENST00000372595 KRTAP6-3Q3LI67 103 aa2.69□□□□□ -1.98
SCMH1-205ENST00000372595 KRTAP4-9Q9BYQ8 210 aa2.68□□□□□ -1.98
SCMH1-205ENST00000372595 SPRR2EP22531 72 aa2.64□□□□□ -1.99
SCMH1-205ENST00000372595 SPRR2BP35325 72 aa2.64□□□□□ -1.99
SCMH1-205ENST00000372595 SPRR2AP35326 72 aa2.64□□□□□ -1.99
SCMH1-205ENST00000372595 KRTAP6-1Q3LI64 71 aa2.63□□□□□ -1.99
SCMH1-205ENST00000372595 LCE1AQ5T7P2 110 aa2.62□□□□□ -1.99
SCMH1-205ENST00000372595 KRTAP5-9P26371 169 aa2.61□□□□□ -1.99
SCMH1-205ENST00000372595 KRTAP5-5Q701N2 237 aaPredicted RBP2.6□□□□□ -1.99
SCMH1-205ENST00000372595 PRM1P04553 51 aa2.58□□□□□ -2
SCMH1-205ENST00000372595 MT1AP04731 61 aa2.58□□□□□ -2
SCMH1-205ENST00000372595 LCE1EQ5T753 118 aa2.55□□□□□ -2
SCMH1-205ENST00000372595 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.54□□□□□ -2
SCMH1-205ENST00000372595 LCE3DQ9BYE3 92 aa2.53□□□□□ -2
SCMH1-205ENST00000372595 SPRR2DP22532 72 aa2.51□□□□□ -2.01
SCMH1-205ENST00000372595 LCE3EQ5T5B0 92 aa2.49□□□□□ -2.01
SCMH1-205ENST00000372595 LCE1DQ5T752 114 aa2.42□□□□□ -2.02
SCMH1-205ENST00000372595 KRTAP6-2Q3LI66 62 aa2.39□□□□□ -2.03
SCMH1-205ENST00000372595 MT3P25713 68 aa2.36□□□□□ -2.03
SCMH1-205ENST00000372595 GPR98Q8WXG9 6306 aa2.35□□□□□ -2.03
SCMH1-205ENST00000372595 NEBP20929 6669 aa2.33□□□□□ -2.04
SCMH1-205ENST00000372595 MT4P47944 62 aa2.27□□□□□ -2.05
SCMH1-205ENST00000372595 KRTAP4-6Q9BYQ5 205 aa2.23□□□□□ -2.05
SCMH1-205ENST00000372595 KRTAP5-4Q6L8H1 288 aa2.21□□□□□ -2.06
SCMH1-205ENST00000372595 KRTAP20-1Q3LI63 56 aa2.13□□□□□ -2.07
SCMH1-205ENST00000372595 KRTAP20-2Q3LI61 65 aa2.12□□□□□ -2.07
SCMH1-205ENST00000372595 HMCN1Q96RW7 5635 aa2.07□□□□□ -2.08
SCMH1-205ENST00000372595 KRTAP4-12Q9BQ66 201 aa2.05□□□□□ -2.08
SCMH1-205ENST00000372595 AHNAK2Q8IVF2 5795 aa2.05□□□□□ -2.08
SCMH1-205ENST00000372595 KRTAP5-2Q701N4 177 aa2.03□□□□□ -2.08
SCMH1-205ENST00000372595 LCE1BQ5T7P3 118 aa2□□□□□ -2.09
SCMH1-205ENST00000372595 MUC5ACP98088 5654 aa1.98□□□□□ -2.09
SCMH1-205ENST00000372595 KRTAP5-3Q6L8H2 238 aa1.98□□□□□ -2.09
SCMH1-205ENST00000372595 MUC19Q7Z5P9 8384 aa1.96□□□□□ -2.1
SCMH1-205ENST00000372595 KRTAP4-11Q9BYQ6 195 aa1.93□□□□□ -2.1
SCMH1-205ENST00000372595 AHNAKQ09666 5890 aaKnown RBP1.81□□□□□ -2.12
SCMH1-205ENST00000372595 KRTAP5-10Q6L8G5 202 aa1.79□□□□□ -2.12
SCMH1-205ENST00000372595 KRTAP4-2Q9BYR5 136 aa1.79□□□□□ -2.12
SCMH1-205ENST00000372595 KRTAP5-1Q6L8H4 278 aa1.76□□□□□ -2.13
SCMH1-205ENST00000372595 LCE1CQ5T751 118 aa1.75□□□□□ -2.13
SCMH1-205ENST00000372595 KRTAP21-1Q3LI58 79 aa1.7□□□□□ -2.14
SCMH1-205ENST00000372595 KRTAP5-8O75690 187 aa1.69□□□□□ -2.14
SCMH1-205ENST00000372595 KRTAP21-2Q3LI59 83 aa1.66□□□□□ -2.14
SCMH1-205ENST00000372595 KRTAP4-4Q9BYR3 166 aa1.65□□□□□ -2.15
SCMH1-205ENST00000372595 KRTAP5-7Q6L8G8 165 aa1.63□□□□□ -2.15
SCMH1-205ENST00000372595 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.6□□□□□ -2.15
SCMH1-205ENST00000372595 MUC5BQ9HC84 5762 aaPredicted RBP1.59□□□□□ -2.15
SCMH1-205ENST00000372595 KRTAP5-11Q6L8G4 156 aa1.5□□□□□ -2.17
SCMH1-205ENST00000372595 PHGR1C9JFL3 82 aa1.3□□□□□ -2.2
SCMH1-205ENST00000372595 MUC16Q8WXI7 14507 aa0.87□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 9.5 ms