RNA–Protein interactions for RNA: ENST00000372547.5

SNX21-205, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best)

Gene SNX21, Length 2,794 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-205ENST00000372547 KRTAP9-4Q9BYQ2 154 aa4.02□□□□□ -1.77
SNX21-205ENST00000372547 KRTAP19-4Q3LI73 84 aa3.99□□□□□ -1.77
SNX21-205ENST00000372547 LOC100996750A0A140TA64 210 aa3.99□□□□□ -1.77
SNX21-205ENST00000372547 MT1EP04732 61 aa3.98□□□□□ -1.77
SNX21-205ENST00000372547 CRCT1Q9UGL9 99 aa3.98□□□□□ -1.77
SNX21-205ENST00000372547 KRTAP9-6A0A140TA67 174 aa3.97□□□□□ -1.77
SNX21-205ENST00000372547 KRTAP9-7A8MTY7 169 aa3.97□□□□□ -1.77
SNX21-205ENST00000372547 KRTAP9-9Q9BYP9 154 aa3.95□□□□□ -1.78
SNX21-205ENST00000372547 KRTAP4-3Q9BYR4 195 aa3.95□□□□□ -1.78
SNX21-205ENST00000372547 LCE5AQ5TCM9 118 aa3.94□□□□□ -1.78
SNX21-205ENST00000372547 MT1GP13640 62 aa3.91□□□□□ -1.78
SNX21-205ENST00000372547 FCGBPQ9Y6R7 5405 aaPredicted RBP3.89□□□□□ -1.79
SNX21-205ENST00000372547 MUC12Q9UKN1 5478 aa3.89□□□□□ -1.79
SNX21-205ENST00000372547 DSTQ03001 7570 aaKnown RBP3.88□□□□□ -1.79
SNX21-205ENST00000372547 KRTAP12-4P60329 112 aa3.87□□□□□ -1.79
SNX21-205ENST00000372547 KRTAP19-6Q3LI70 58 aa3.82□□□□□ -1.8
SNX21-205ENST00000372547 MACF1Q9UPN3 7388 aaKnown RBP3.74□□□□□ -1.81
SNX21-205ENST00000372547 MT1MQ8N339 61 aa3.72□□□□□ -1.81
SNX21-205ENST00000372547 SYNE1Q8NF91 8797 aaKnown RBP3.72□□□□□ -1.81
SNX21-205ENST00000372547 LCE3BQ5TA77 95 aa3.71□□□□□ -1.82
SNX21-205ENST00000372547 KRTAP4-9Q9BYQ8 210 aa3.7□□□□□ -1.82
SNX21-205ENST00000372547 SYNE2Q8WXH0 6885 aaKnown RBP3.68□□□□□ -1.82
SNX21-205ENST00000372547 KRTAP19-3Q7Z4W3 81 aa3.67□□□□□ -1.82
SNX21-205ENST00000372547 SPRR2FQ96RM1 72 aa3.63□□□□□ -1.83
SNX21-205ENST00000372547 MDN1Q9NU22 5596 aa3.56□□□□□ -1.84
SNX21-205ENST00000372547 OBSCNQ5VST9 7968 aa3.54□□□□□ -1.84
SNX21-205ENST00000372547 LCE1FQ5T754 118 aa3.53□□□□□ -1.84
SNX21-205ENST00000372547 KRTAP9-2Q9BYQ4 174 aa3.51□□□□□ -1.85
SNX21-205ENST00000372547 LCE3DQ9BYE3 92 aa3.48□□□□□ -1.85
SNX21-205ENST00000372547 KRTAP6-1Q3LI64 71 aa3.47□□□□□ -1.85
SNX21-205ENST00000372547 PRM1P04553 51 aa3.46□□□□□ -1.85
SNX21-205ENST00000372547 LCE1AQ5T7P2 110 aa3.44□□□□□ -1.86
SNX21-205ENST00000372547 LCE3EQ5T5B0 92 aa3.43□□□□□ -1.86
SNX21-205ENST00000372547 KRTAP4-12Q9BQ66 201 aa3.42□□□□□ -1.86
SNX21-205ENST00000372547 MT1AP04731 61 aa3.41□□□□□ -1.86
SNX21-205ENST00000372547 KRTAP5-5Q701N2 237 aaPredicted RBP3.39□□□□□ -1.87
SNX21-205ENST00000372547 KRTAP2-2Q9BYT5 123 aa3.33□□□□□ -1.88
SNX21-205ENST00000372547 SPRR2EP22531 72 aa3.3□□□□□ -1.88
SNX21-205ENST00000372547 SPRR2BP35325 72 aa3.3□□□□□ -1.88
SNX21-205ENST00000372547 SPRR2AP35326 72 aa3.3□□□□□ -1.88
SNX21-205ENST00000372547 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.29□□□□□ -1.88
SNX21-205ENST00000372547 KRTAP6-3Q3LI67 103 aa3.27□□□□□ -1.89
SNX21-205ENST00000372547 KRTAP6-2Q3LI66 62 aa3.26□□□□□ -1.89
SNX21-205ENST00000372547 KRTAP5-9P26371 169 aa3.24□□□□□ -1.89
SNX21-205ENST00000372547 KRTAP4-6Q9BYQ5 205 aa3.17□□□□□ -1.9
SNX21-205ENST00000372547 SPRR2DP22532 72 aa3.15□□□□□ -1.91
SNX21-205ENST00000372547 MT3P25713 68 aa3.14□□□□□ -1.91
SNX21-205ENST00000372547 LCE1EQ5T753 118 aa3.12□□□□□ -1.91
SNX21-205ENST00000372547 LCE1DQ5T752 114 aa2.98□□□□□ -1.93
SNX21-205ENST00000372547 NEBP20929 6669 aa2.89□□□□□ -1.95
SNX21-205ENST00000372547 MT4P47944 62 aa2.87□□□□□ -1.95
SNX21-205ENST00000372547 KRTAP4-11Q9BYQ6 195 aa2.8□□□□□ -1.96
SNX21-205ENST00000372547 KRTAP5-4Q6L8H1 288 aa2.77□□□□□ -1.97
SNX21-205ENST00000372547 HMCN1Q96RW7 5635 aa2.72□□□□□ -1.97
SNX21-205ENST00000372547 KRTAP20-2Q3LI61 65 aa2.68□□□□□ -1.98
SNX21-205ENST00000372547 MUC5ACP98088 5654 aa2.65□□□□□ -1.99
SNX21-205ENST00000372547 KRTAP4-2Q9BYR5 136 aa2.59□□□□□ -1.99
SNX21-205ENST00000372547 GPR98Q8WXG9 6306 aa2.59□□□□□ -1.99
SNX21-205ENST00000372547 KRTAP5-2Q701N4 177 aa2.57□□□□□ -2
SNX21-205ENST00000372547 KRTAP20-1Q3LI63 56 aa2.56□□□□□ -2
SNX21-205ENST00000372547 LCE1BQ5T7P3 118 aa2.56□□□□□ -2
SNX21-205ENST00000372547 KRTAP5-3Q6L8H2 238 aa2.52□□□□□ -2.01
SNX21-205ENST00000372547 KRTAP5-10Q6L8G5 202 aa2.46□□□□□ -2.02
SNX21-205ENST00000372547 MUC19Q7Z5P9 8384 aa2.35□□□□□ -2.03
SNX21-205ENST00000372547 KRTAP5-1Q6L8H4 278 aa2.32□□□□□ -2.04
SNX21-205ENST00000372547 LCE1CQ5T751 118 aa2.19□□□□□ -2.06
SNX21-205ENST00000372547 KRTAP4-4Q9BYR3 166 aa2.19□□□□□ -2.06
SNX21-205ENST00000372547 KRTAP21-2Q3LI59 83 aa2.17□□□□□ -2.06
SNX21-205ENST00000372547 AHNAK2Q8IVF2 5795 aa2.17□□□□□ -2.06
SNX21-205ENST00000372547 KRTAP5-8O75690 187 aa2.14□□□□□ -2.07
SNX21-205ENST00000372547 MUC5BQ9HC84 5762 aaPredicted RBP2.1□□□□□ -2.07
SNX21-205ENST00000372547 KRTAP21-1Q3LI58 79 aa2.09□□□□□ -2.08
SNX21-205ENST00000372547 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.02□□□□□ -2.09
SNX21-205ENST00000372547 KRTAP5-11Q6L8G4 156 aa1.99□□□□□ -2.09
SNX21-205ENST00000372547 AHNAKQ09666 5890 aaKnown RBP1.98□□□□□ -2.09
SNX21-205ENST00000372547 KRTAP5-7Q6L8G8 165 aa1.97□□□□□ -2.09
SNX21-205ENST00000372547 PHGR1C9JFL3 82 aa1.65□□□□□ -2.14
SNX21-205ENST00000372547 MUC16Q8WXI7 14507 aa1.15□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 60.4 ms