RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 KRTAP4-3Q9BYR4 195 aa4.09□□□□□ -1.76
PDE6C-201ENST00000371447 KRTAP19-6Q3LI70 58 aa4.08□□□□□ -1.76
PDE6C-201ENST00000371447 MT1LQ93083 61 aa4.08□□□□□ -1.76
PDE6C-201ENST00000371447 SYNE2Q8WXH0 6885 aaKnown RBP4.07□□□□□ -1.76
PDE6C-201ENST00000371447 LOC100996750A0A140TA64 210 aa4.02□□□□□ -1.77
PDE6C-201ENST00000371447 SPRR2FQ96RM1 72 aa3.98□□□□□ -1.77
PDE6C-201ENST00000371447 KRTAP4-6Q9BYQ5 205 aa3.98□□□□□ -1.77
PDE6C-201ENST00000371447 MT1GP13640 62 aa3.97□□□□□ -1.77
PDE6C-201ENST00000371447 SYNE1Q8NF91 8797 aaKnown RBP3.96□□□□□ -1.77
PDE6C-201ENST00000371447 MDN1Q9NU22 5596 aa3.93□□□□□ -1.78
PDE6C-201ENST00000371447 OBSCNQ5VST9 7968 aa3.9□□□□□ -1.78
PDE6C-201ENST00000371447 KRTAP9-2Q9BYQ4 174 aa3.9□□□□□ -1.79
PDE6C-201ENST00000371447 KRTAP19-3Q7Z4W3 81 aa3.86□□□□□ -1.79
PDE6C-201ENST00000371447 MT1MQ8N339 61 aa3.85□□□□□ -1.79
PDE6C-201ENST00000371447 KRTAP2-3P0C7H8 128 aa3.75□□□□□ -1.81
PDE6C-201ENST00000371447 KRTAP2-4Q9BYR9 128 aa3.75□□□□□ -1.81
PDE6C-201ENST00000371447 KRTAP2-1Q9BYU5 128 aa3.75□□□□□ -1.81
PDE6C-201ENST00000371447 LCE5AQ5TCM9 118 aa3.7□□□□□ -1.82
PDE6C-201ENST00000371447 LCE3BQ5TA77 95 aa3.68□□□□□ -1.82
PDE6C-201ENST00000371447 KRTAP19-4Q3LI73 84 aa3.67□□□□□ -1.82
PDE6C-201ENST00000371447 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.63□□□□□ -1.83
PDE6C-201ENST00000371447 SPRR2EP22531 72 aa3.62□□□□□ -1.83
PDE6C-201ENST00000371447 SPRR2BP35325 72 aa3.62□□□□□ -1.83
PDE6C-201ENST00000371447 SPRR2AP35326 72 aa3.62□□□□□ -1.83
PDE6C-201ENST00000371447 KRTAP4-9Q9BYQ8 210 aa3.62□□□□□ -1.83
PDE6C-201ENST00000371447 KRTAP9-6A0A140TA67 174 aa3.61□□□□□ -1.83
PDE6C-201ENST00000371447 LCE1AQ5T7P2 110 aa3.58□□□□□ -1.84
PDE6C-201ENST00000371447 KRTAP4-12Q9BQ66 201 aa3.54□□□□□ -1.84
PDE6C-201ENST00000371447 KRTAP6-1Q3LI64 71 aa3.53□□□□□ -1.84
PDE6C-201ENST00000371447 KRTAP12-4P60329 112 aa3.51□□□□□ -1.85
PDE6C-201ENST00000371447 SPRR2DP22532 72 aa3.45□□□□□ -1.86
PDE6C-201ENST00000371447 KRTAP9-9Q9BYP9 154 aa3.45□□□□□ -1.86
PDE6C-201ENST00000371447 KRTAP9-4Q9BYQ2 154 aa3.45□□□□□ -1.86
PDE6C-201ENST00000371447 KRTAP5-9P26371 169 aa3.44□□□□□ -1.86
PDE6C-201ENST00000371447 LCE1EQ5T753 118 aa3.4□□□□□ -1.86
PDE6C-201ENST00000371447 MT1AP04731 61 aa3.37□□□□□ -1.87
PDE6C-201ENST00000371447 KRTAP2-2Q9BYT5 123 aa3.35□□□□□ -1.87
PDE6C-201ENST00000371447 KRTAP6-3Q3LI67 103 aa3.31□□□□□ -1.88
PDE6C-201ENST00000371447 LCE3DQ9BYE3 92 aa3.3□□□□□ -1.88
PDE6C-201ENST00000371447 KRTAP5-5Q701N2 237 aaPredicted RBP3.28□□□□□ -1.88
PDE6C-201ENST00000371447 LCE1DQ5T752 114 aa3.27□□□□□ -1.89
PDE6C-201ENST00000371447 LCE4AQ5TA78 99 aa3.26□□□□□ -1.89
PDE6C-201ENST00000371447 KRTAP9-7A8MTY7 169 aa3.23□□□□□ -1.89
PDE6C-201ENST00000371447 KRTAP6-2Q3LI66 62 aa3.22□□□□□ -1.89
PDE6C-201ENST00000371447 LCE3EQ5T5B0 92 aa3.21□□□□□ -1.9
PDE6C-201ENST00000371447 PRM1P04553 51 aa3.19□□□□□ -1.9
PDE6C-201ENST00000371447 MT4P47944 62 aa3.18□□□□□ -1.9
PDE6C-201ENST00000371447 NEBP20929 6669 aa3.17□□□□□ -1.9
PDE6C-201ENST00000371447 KRTAP4-2Q9BYR5 136 aa3.11□□□□□ -1.91
PDE6C-201ENST00000371447 MUC19Q7Z5P9 8384 aa3.1□□□□□ -1.91
PDE6C-201ENST00000371447 MT3P25713 68 aa3.08□□□□□ -1.92
PDE6C-201ENST00000371447 LCE1FQ5T754 118 aa3.08□□□□□ -1.92
PDE6C-201ENST00000371447 KRTAP4-11Q9BYQ6 195 aa3.07□□□□□ -1.92
PDE6C-201ENST00000371447 HMCN1Q96RW7 5635 aa2.99□□□□□ -1.93
PDE6C-201ENST00000371447 KRTAP5-4Q6L8H1 288 aa2.91□□□□□ -1.94
PDE6C-201ENST00000371447 KRTAP20-2Q3LI61 65 aa2.88□□□□□ -1.95
PDE6C-201ENST00000371447 KRTAP20-1Q3LI63 56 aa2.83□□□□□ -1.96
PDE6C-201ENST00000371447 LCE1BQ5T7P3 118 aa2.75□□□□□ -1.97
PDE6C-201ENST00000371447 KRTAP5-3Q6L8H2 238 aa2.73□□□□□ -1.97
PDE6C-201ENST00000371447 KRTAP5-2Q701N4 177 aa2.68□□□□□ -1.98
PDE6C-201ENST00000371447 MUC5ACP98088 5654 aa2.68□□□□□ -1.98
PDE6C-201ENST00000371447 AHNAK2Q8IVF2 5795 aa2.44□□□□□ -2.02
PDE6C-201ENST00000371447 MUC5BQ9HC84 5762 aaPredicted RBP2.39□□□□□ -2.03
PDE6C-201ENST00000371447 KRTAP5-1Q6L8H4 278 aa2.39□□□□□ -2.03
PDE6C-201ENST00000371447 KRTAP5-10Q6L8G5 202 aa2.34□□□□□ -2.03
PDE6C-201ENST00000371447 LCE1CQ5T751 118 aa2.3□□□□□ -2.04
PDE6C-201ENST00000371447 KRTAP4-4Q9BYR3 166 aa2.3□□□□□ -2.04
PDE6C-201ENST00000371447 GPR98Q8WXG9 6306 aa2.29□□□□□ -2.04
PDE6C-201ENST00000371447 KRTAP5-8O75690 187 aa2.28□□□□□ -2.04
PDE6C-201ENST00000371447 KRTAP21-2Q3LI59 83 aa2.2□□□□□ -2.06
PDE6C-201ENST00000371447 KRTAP5-11Q6L8G4 156 aa2.09□□□□□ -2.08
PDE6C-201ENST00000371447 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.06□□□□□ -2.08
PDE6C-201ENST00000371447 KRTAP5-7Q6L8G8 165 aa2.03□□□□□ -2.08
PDE6C-201ENST00000371447 AHNAKQ09666 5890 aaKnown RBP1.89□□□□□ -2.11
PDE6C-201ENST00000371447 KRTAP21-1Q3LI58 79 aa1.84□□□□□ -2.12
PDE6C-201ENST00000371447 PHGR1C9JFL3 82 aa1.74□□□□□ -2.13
PDE6C-201ENST00000371447 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 42.8 ms