RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 MT1GP13640 62 aa3.24□□□□□ -1.89
SMARCA1-202ENST00000371122 LCE3BQ5TA77 95 aa3.19□□□□□ -1.9
SMARCA1-202ENST00000371122 KRTAP9-6A0A140TA67 174 aa3.17□□□□□ -1.9
SMARCA1-202ENST00000371122 SYNE2Q8WXH0 6885 aaKnown RBP3.17□□□□□ -1.9
SMARCA1-202ENST00000371122 KRTAP4-3Q9BYR4 195 aa3.1□□□□□ -1.91
SMARCA1-202ENST00000371122 LOC100996750A0A140TA64 210 aa3.07□□□□□ -1.92
SMARCA1-202ENST00000371122 KRTAP12-4P60329 112 aa3.07□□□□□ -1.92
SMARCA1-202ENST00000371122 SPRR2EP22531 72 aa3.07□□□□□ -1.92
SMARCA1-202ENST00000371122 SPRR2BP35325 72 aa3.07□□□□□ -1.92
SMARCA1-202ENST00000371122 SPRR2AP35326 72 aa3.07□□□□□ -1.92
SMARCA1-202ENST00000371122 KRTAP9-6A8MVA2 160 aa3.05□□□□□ -1.92
SMARCA1-202ENST00000371122 MACF1Q9UPN3 7388 aaKnown RBP3.02□□□□□ -1.93
SMARCA1-202ENST00000371122 MT1LQ93083 61 aa3.01□□□□□ -1.93
SMARCA1-202ENST00000371122 KRTAP9-1A8MXZ3 250 aaPredicted RBP3□□□□□ -1.93
SMARCA1-202ENST00000371122 MT1EP04732 61 aa2.98□□□□□ -1.93
SMARCA1-202ENST00000371122 MUC12Q9UKN1 5478 aa2.94□□□□□ -1.94
SMARCA1-202ENST00000371122 KRTAP5-9P26371 169 aa2.94□□□□□ -1.94
SMARCA1-202ENST00000371122 KRTAP19-3Q7Z4W3 81 aa2.94□□□□□ -1.94
SMARCA1-202ENST00000371122 SPRR2DP22532 72 aa2.92□□□□□ -1.94
SMARCA1-202ENST00000371122 KRTAP6-3Q3LI67 103 aa2.92□□□□□ -1.94
SMARCA1-202ENST00000371122 KRTAP19-7Q3SYF9 63 aa2.92□□□□□ -1.94
SMARCA1-202ENST00000371122 KRTAP4-9Q9BYQ8 210 aa2.9□□□□□ -1.95
SMARCA1-202ENST00000371122 MT1MQ8N339 61 aa2.87□□□□□ -1.95
SMARCA1-202ENST00000371122 LCE3DQ9BYE3 92 aa2.87□□□□□ -1.95
SMARCA1-202ENST00000371122 KRTAP9-7A8MTY7 169 aa2.85□□□□□ -1.95
SMARCA1-202ENST00000371122 LCE3EQ5T5B0 92 aa2.79□□□□□ -1.96
SMARCA1-202ENST00000371122 KRTAP19-4Q3LI73 84 aa2.78□□□□□ -1.96
SMARCA1-202ENST00000371122 MT4P47944 62 aa2.78□□□□□ -1.96
SMARCA1-202ENST00000371122 KRTAP2-3P0C7H8 128 aa2.77□□□□□ -1.97
SMARCA1-202ENST00000371122 KRTAP2-4Q9BYR9 128 aa2.77□□□□□ -1.97
SMARCA1-202ENST00000371122 KRTAP2-1Q9BYU5 128 aa2.77□□□□□ -1.97
SMARCA1-202ENST00000371122 NEBP20929 6669 aa2.76□□□□□ -1.97
SMARCA1-202ENST00000371122 MUC19Q7Z5P9 8384 aa2.74□□□□□ -1.97
SMARCA1-202ENST00000371122 LCE1AQ5T7P2 110 aa2.72□□□□□ -1.97
SMARCA1-202ENST00000371122 PRM1P04553 51 aa2.69□□□□□ -1.98
SMARCA1-202ENST00000371122 LCE5AQ5TCM9 118 aa2.67□□□□□ -1.98
SMARCA1-202ENST00000371122 MDN1Q9NU22 5596 aa2.67□□□□□ -1.98
SMARCA1-202ENST00000371122 KRTAP6-1Q3LI64 71 aa2.62□□□□□ -1.99
SMARCA1-202ENST00000371122 LCE1BQ5T7P3 118 aa2.62□□□□□ -1.99
SMARCA1-202ENST00000371122 LCE1DQ5T752 114 aa2.61□□□□□ -1.99
SMARCA1-202ENST00000371122 MT3P25713 68 aa2.59□□□□□ -1.99
SMARCA1-202ENST00000371122 MT1AP04731 61 aa2.55□□□□□ -2
SMARCA1-202ENST00000371122 KRTAP6-2Q3LI66 62 aa2.52□□□□□ -2.01
SMARCA1-202ENST00000371122 KRTAP20-1Q3LI63 56 aa2.51□□□□□ -2.01
SMARCA1-202ENST00000371122 KRTAP2-2Q9BYT5 123 aa2.47□□□□□ -2.01
SMARCA1-202ENST00000371122 KRTAP5-5Q701N2 237 aaPredicted RBP2.46□□□□□ -2.02
SMARCA1-202ENST00000371122 KRTAP5-4Q6L8H1 288 aa2.45□□□□□ -2.02
SMARCA1-202ENST00000371122 KRTAP9-4Q9BYQ2 154 aa2.37□□□□□ -2.03
SMARCA1-202ENST00000371122 LCE4AQ5TA78 99 aa2.35□□□□□ -2.03
SMARCA1-202ENST00000371122 KRTAP4-6Q9BYQ5 205 aa2.35□□□□□ -2.03
SMARCA1-202ENST00000371122 KRTAP9-9Q9BYP9 154 aa2.32□□□□□ -2.04
SMARCA1-202ENST00000371122 HMCN1Q96RW7 5635 aa2.22□□□□□ -2.05
SMARCA1-202ENST00000371122 LCE1EQ5T753 118 aa2.22□□□□□ -2.05
SMARCA1-202ENST00000371122 KRTAP5-3Q6L8H2 238 aa2.21□□□□□ -2.06
SMARCA1-202ENST00000371122 KRTAP5-2Q701N4 177 aa2.2□□□□□ -2.06
SMARCA1-202ENST00000371122 MUC5ACP98088 5654 aa2.2□□□□□ -2.06
SMARCA1-202ENST00000371122 KRTAP20-2Q3LI61 65 aa2.19□□□□□ -2.06
SMARCA1-202ENST00000371122 GPR98Q8WXG9 6306 aa2.16□□□□□ -2.06
SMARCA1-202ENST00000371122 KRTAP4-11Q9BYQ6 195 aa2.1□□□□□ -2.07
SMARCA1-202ENST00000371122 AHNAK2Q8IVF2 5795 aa2.09□□□□□ -2.07
SMARCA1-202ENST00000371122 LCE1CQ5T751 118 aa2.08□□□□□ -2.08
SMARCA1-202ENST00000371122 LCE1FQ5T754 118 aa2.08□□□□□ -2.08
SMARCA1-202ENST00000371122 KRTAP5-10Q6L8G5 202 aa2.08□□□□□ -2.08
SMARCA1-202ENST00000371122 KRTAP4-12Q9BQ66 201 aa2.05□□□□□ -2.08
SMARCA1-202ENST00000371122 KRTAP4-4Q9BYR3 166 aa2.04□□□□□ -2.08
SMARCA1-202ENST00000371122 KRTAP5-7Q6L8G8 165 aa1.99□□□□□ -2.09
SMARCA1-202ENST00000371122 KRTAP4-2Q9BYR5 136 aa1.98□□□□□ -2.09
SMARCA1-202ENST00000371122 KRTAP5-8O75690 187 aa1.92□□□□□ -2.1
SMARCA1-202ENST00000371122 KRTAP5-1Q6L8H4 278 aa1.89□□□□□ -2.11
SMARCA1-202ENST00000371122 MUC5BQ9HC84 5762 aaPredicted RBP1.71□□□□□ -2.14
SMARCA1-202ENST00000371122 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.7□□□□□ -2.14
SMARCA1-202ENST00000371122 AHNAKQ09666 5890 aaKnown RBP1.67□□□□□ -2.14
SMARCA1-202ENST00000371122 KRTAP5-11Q6L8G4 156 aa1.57□□□□□ -2.16
SMARCA1-202ENST00000371122 KRTAP21-2Q3LI59 83 aa1.51□□□□□ -2.17
SMARCA1-202ENST00000371122 KRTAP21-1Q3LI58 79 aa1.47□□□□□ -2.17
SMARCA1-202ENST00000371122 PHGR1C9JFL3 82 aa1.35□□□□□ -2.19
SMARCA1-202ENST00000371122 MUC16Q8WXI7 14507 aa0.9□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 133.4 ms