RNA–Protein interactions for RNA: ENST00000370138.1

LRRC39-203, Transcript of leucine rich repeat containing 39, humanhuman

TSL 5 BASIC

Gene LRRC39, Length 1,466 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-203ENST00000370138 CRCT1Q9UGL9 99 aa1.44□□□□□ -2.18
LRRC39-203ENST00000370138 KRTAP4-1Q9BYQ7 146 aa1.43□□□□□ -2.18
LRRC39-203ENST00000370138 RYR1P21817 5038 aa1.43□□□□□ -2.18
LRRC39-203ENST00000370138 KRTAP12-3P60328 96 aa1.42□□□□□ -2.18
LRRC39-203ENST00000370138 MYCBP2O75592 4640 aa1.4□□□□□ -2.19
LRRC39-203ENST00000370138 RYR2Q92736 4967 aa1.4□□□□□ -2.19
LRRC39-203ENST00000370138 KIAA1109Q2LD37 5005 aa1.39□□□□□ -2.19
LRRC39-203ENST00000370138 MT1HL1P0DM35 61 aa1.37□□□□□ -2.19
LRRC39-203ENST00000370138 RYR3Q15413 4870 aa1.37□□□□□ -2.19
LRRC39-203ENST00000370138 BIRC6Q9NR09 4857 aa1.36□□□□□ -2.19
LRRC39-203ENST00000370138 MUC5BQ9HC84 5762 aaPredicted RBP1.34□□□□□ -2.19
LRRC39-203ENST00000370138 M0R2T5 61 aa1.33□□□□□ -2.2
LRRC39-203ENST00000370138 HERC1Q15751 4861 aa1.32□□□□□ -2.2
LRRC39-203ENST00000370138 KMT2CQ8NEZ4 4911 aaKnown RBP1.31□□□□□ -2.2
LRRC39-203ENST00000370138 MUC2Q02817 5179 aa1.3□□□□□ -2.2
LRRC39-203ENST00000370138 KRTAP2-3P0C7H8 128 aa1.3□□□□□ -2.2
LRRC39-203ENST00000370138 KRTAP2-4Q9BYR9 128 aa1.3□□□□□ -2.2
LRRC39-203ENST00000370138 KRTAP2-1Q9BYU5 128 aa1.3□□□□□ -2.2
LRRC39-203ENST00000370138 MUC17Q685J3 4493 aa1.3□□□□□ -2.2
LRRC39-203ENST00000370138 EPPK1P58107 5090 aaKnown RBP1.29□□□□□ -2.2
LRRC39-203ENST00000370138 LRP2P98164 4655 aa1.28□□□□□ -2.2
LRRC39-203ENST00000370138 FCGBPQ9Y6R7 5405 aaPredicted RBP1.28□□□□□ -2.2
LRRC39-203ENST00000370138 FLGP20930 4061 aaPredicted RBP1.27□□□□□ -2.21
LRRC39-203ENST00000370138 LPAP08519 4548 aa1.27□□□□□ -2.21
LRRC39-203ENST00000370138 KRTAP19-2Q3LHN2 52 aa1.26□□□□□ -2.21
LRRC39-203ENST00000370138 KRTAP8-1Q8IUC2 63 aa1.24□□□□□ -2.21
LRRC39-203ENST00000370138 HERC2O95714 4834 aa1.23□□□□□ -2.21
LRRC39-203ENST00000370138 ABCA13Q86UQ4 5058 aa1.21□□□□□ -2.22
LRRC39-203ENST00000370138 GPR98Q8WXG9 6306 aa1.19□□□□□ -2.22
LRRC39-203ENST00000370138 AHNAKQ09666 5890 aaKnown RBP1.18□□□□□ -2.22
LRRC39-203ENST00000370138 SPRR2GQ9BYE4 73 aa1.18□□□□□ -2.22
LRRC39-203ENST00000370138 MT2AP02795 61 aa1.15□□□□□ -2.23
LRRC39-203ENST00000370138 MT1FP04733 61 aa1.15□□□□□ -2.23
LRRC39-203ENST00000370138 FAT4Q6V0I7 4981 aa1.14□□□□□ -2.23
LRRC39-203ENST00000370138 MT1HP80294 61 aa1.13□□□□□ -2.23
LRRC39-203ENST00000370138 KRTAP19-8Q3LI54 63 aa1.13□□□□□ -2.23
LRRC39-203ENST00000370138 HMCN2Q8NDA2 5059 aa1.12□□□□□ -2.23
LRRC39-203ENST00000370138 MT1BP07438 61 aa1.12□□□□□ -2.23
LRRC39-203ENST00000370138 MT1XP80297 61 aa1.12□□□□□ -2.23
LRRC39-203ENST00000370138 RNF213Q63HN8 5207 aa1.12□□□□□ -2.23
LRRC39-203ENST00000370138 FSIP2Q5CZC0 6907 aa1.12□□□□□ -2.23
LRRC39-203ENST00000370138 PRM1P04553 51 aa1.11□□□□□ -2.23
LRRC39-203ENST00000370138 NEBP20929 6669 aa1.08□□□□□ -2.24
LRRC39-203ENST00000370138 KRTAP19-5Q3LI72 72 aa1.08□□□□□ -2.24
LRRC39-203ENST00000370138 SSPOA2VEC9 5147 aa1.06□□□□□ -2.24
LRRC39-203ENST00000370138 KRTAP20-1Q3LI63 56 aa1.05□□□□□ -2.24
LRRC39-203ENST00000370138 SYNE2Q8WXH0 6885 aaKnown RBP1.04□□□□□ -2.24
LRRC39-203ENST00000370138 MACF1Q9UPN3 7388 aaKnown RBP1.03□□□□□ -2.25
LRRC39-203ENST00000370138 AHNAK2Q8IVF2 5795 aa1.02□□□□□ -2.25
LRRC39-203ENST00000370138 MT1AP04731 61 aa1.02□□□□□ -2.25
LRRC39-203ENST00000370138 KRTAP19-7Q3SYF9 63 aa0.99□□□□□ -2.25
LRRC39-203ENST00000370138 MT1LQ93083 61 aa0.99□□□□□ -2.25
LRRC39-203ENST00000370138 MT1EP04732 61 aa0.98□□□□□ -2.25
LRRC39-203ENST00000370138 USH2AO75445 5202 aa0.96□□□□□ -2.26
LRRC39-203ENST00000370138 SPRR2DP22532 72 aa0.94□□□□□ -2.26
LRRC39-203ENST00000370138 SPRR2BP35325 72 aa0.94□□□□□ -2.26
LRRC39-203ENST00000370138 KMT2DO14686 5537 aa0.94□□□□□ -2.26
LRRC39-203ENST00000370138 KRTAP19-3Q7Z4W3 81 aa0.93□□□□□ -2.26
LRRC39-203ENST00000370138 MT1GP13640 62 aa0.92□□□□□ -2.26
LRRC39-203ENST00000370138 SPRR2AP35326 72 aa0.92□□□□□ -2.26
LRRC39-203ENST00000370138 MT1MQ8N339 61 aa0.92□□□□□ -2.26
LRRC39-203ENST00000370138 KRTAP6-2Q3LI66 62 aa0.91□□□□□ -2.26
LRRC39-203ENST00000370138 SPRR2FQ96RM1 72 aa0.89□□□□□ -2.27
LRRC39-203ENST00000370138 KRTAP19-6Q3LI70 58 aa0.88□□□□□ -2.27
LRRC39-203ENST00000370138 SYNE1Q8NF91 8797 aaKnown RBP0.87□□□□□ -2.27
LRRC39-203ENST00000370138 MUC5ACP98088 5654 aa0.86□□□□□ -2.27
LRRC39-203ENST00000370138 SPRR2EP22531 72 aa0.85□□□□□ -2.27
LRRC39-203ENST00000370138 DSTQ03001 7570 aaKnown RBP0.85□□□□□ -2.27
LRRC39-203ENST00000370138 KRTAP6-1Q3LI64 71 aa0.84□□□□□ -2.28
LRRC39-203ENST00000370138 MDN1Q9NU22 5596 aa0.83□□□□□ -2.28
LRRC39-203ENST00000370138 KRTAP5-10Q6L8G5 202 aa0.83□□□□□ -2.28
LRRC39-203ENST00000370138 MUC12Q9UKN1 5478 aa0.83□□□□□ -2.28
LRRC39-203ENST00000370138 KRTAP21-1Q3LI58 79 aa0.82□□□□□ -2.28
LRRC39-203ENST00000370138 MUC16Q8WXI7 14507 aa0.77□□□□□ -2.29
LRRC39-203ENST00000370138 MT4P47944 62 aa0.63□□□□□ -2.31
LRRC39-203ENST00000370138 KRTAP20-2Q3LI61 65 aa0.62□□□□□ -2.31
LRRC39-203ENST00000370138 PHGR1C9JFL3 82 aa0.52□□□□□ -2.33
Retrieved 77 of 20,778 RNA–protein pairs in 48.5 ms