RNA–Protein interactions for RNA: ENST00000369622.7

SYNCRIP-202, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYNCRIP, Length 3,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-202ENST00000369622 CRCT1Q9UGL9 99 aa5.29□□□□□ -1.56
SYNCRIP-202ENST00000369622 KRTAP4-3Q9BYR4 195 aa5.28□□□□□ -1.56
SYNCRIP-202ENST00000369622 LOC100996750A0A140TA64 210 aa5.28□□□□□ -1.56
SYNCRIP-202ENST00000369622 MUC12Q9UKN1 5478 aa5.27□□□□□ -1.57
SYNCRIP-202ENST00000369622 DSTQ03001 7570 aaKnown RBP5.26□□□□□ -1.57
SYNCRIP-202ENST00000369622 FCGBPQ9Y6R7 5405 aaPredicted RBP5.24□□□□□ -1.57
SYNCRIP-202ENST00000369622 MT1GP13640 62 aa5.21□□□□□ -1.58
SYNCRIP-202ENST00000369622 OBSCNQ5VST9 7968 aa5.18□□□□□ -1.58
SYNCRIP-202ENST00000369622 KRTAP19-4Q3LI73 84 aa5.15□□□□□ -1.58
SYNCRIP-202ENST00000369622 KRTAP19-6Q3LI70 58 aa5.13□□□□□ -1.59
SYNCRIP-202ENST00000369622 SYNE1Q8NF91 8797 aaKnown RBP5.08□□□□□ -1.6
SYNCRIP-202ENST00000369622 MT1MQ8N339 61 aa5.04□□□□□ -1.6
SYNCRIP-202ENST00000369622 KRTAP19-3Q7Z4W3 81 aa5.02□□□□□ -1.61
SYNCRIP-202ENST00000369622 KRTAP4-9Q9BYQ8 210 aa4.99□□□□□ -1.61
SYNCRIP-202ENST00000369622 SPRR2FQ96RM1 72 aa4.95□□□□□ -1.62
SYNCRIP-202ENST00000369622 LCE3BQ5TA77 95 aa4.88□□□□□ -1.63
SYNCRIP-202ENST00000369622 KRTAP9-7A8MTY7 169 aa4.86□□□□□ -1.63
SYNCRIP-202ENST00000369622 MACF1Q9UPN3 7388 aaKnown RBP4.84□□□□□ -1.63
SYNCRIP-202ENST00000369622 PRM1P04553 51 aa4.83□□□□□ -1.64
SYNCRIP-202ENST00000369622 KRTAP9-2Q9BYQ4 174 aa4.8□□□□□ -1.64
SYNCRIP-202ENST00000369622 SYNE2Q8WXH0 6885 aaKnown RBP4.8□□□□□ -1.64
SYNCRIP-202ENST00000369622 LCE5AQ5TCM9 118 aa4.8□□□□□ -1.64
SYNCRIP-202ENST00000369622 MDN1Q9NU22 5596 aa4.71□□□□□ -1.66
SYNCRIP-202ENST00000369622 KRTAP6-3Q3LI67 103 aa4.69□□□□□ -1.66
SYNCRIP-202ENST00000369622 LCE1AQ5T7P2 110 aa4.68□□□□□ -1.66
SYNCRIP-202ENST00000369622 KRTAP6-1Q3LI64 71 aa4.65□□□□□ -1.67
SYNCRIP-202ENST00000369622 KRTAP9-6A0A140TA67 174 aa4.62□□□□□ -1.67
SYNCRIP-202ENST00000369622 KRTAP5-5Q701N2 237 aaPredicted RBP4.6□□□□□ -1.67
SYNCRIP-202ENST00000369622 LCE3DQ9BYE3 92 aa4.56□□□□□ -1.68
SYNCRIP-202ENST00000369622 LCE3EQ5T5B0 92 aa4.53□□□□□ -1.68
SYNCRIP-202ENST00000369622 KRTAP2-2Q9BYT5 123 aa4.49□□□□□ -1.69
SYNCRIP-202ENST00000369622 MT1AP04731 61 aa4.49□□□□□ -1.69
SYNCRIP-202ENST00000369622 LCE1EQ5T753 118 aa4.48□□□□□ -1.69
SYNCRIP-202ENST00000369622 SPRR2EP22531 72 aa4.43□□□□□ -1.7
SYNCRIP-202ENST00000369622 SPRR2BP35325 72 aa4.43□□□□□ -1.7
SYNCRIP-202ENST00000369622 SPRR2AP35326 72 aa4.43□□□□□ -1.7
SYNCRIP-202ENST00000369622 KRTAP6-2Q3LI66 62 aa4.4□□□□□ -1.71
SYNCRIP-202ENST00000369622 KRTAP4-6Q9BYQ5 205 aa4.35□□□□□ -1.71
SYNCRIP-202ENST00000369622 KRTAP5-9P26371 169 aa4.28□□□□□ -1.72
SYNCRIP-202ENST00000369622 LCE1DQ5T752 114 aa4.25□□□□□ -1.73
SYNCRIP-202ENST00000369622 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.24□□□□□ -1.73
SYNCRIP-202ENST00000369622 KRTAP9-4Q9BYQ2 154 aa4.23□□□□□ -1.73
SYNCRIP-202ENST00000369622 SPRR2DP22532 72 aa4.22□□□□□ -1.73
SYNCRIP-202ENST00000369622 MT3P25713 68 aa4.08□□□□□ -1.76
SYNCRIP-202ENST00000369622 MUC19Q7Z5P9 8384 aa3.87□□□□□ -1.79
SYNCRIP-202ENST00000369622 MT4P47944 62 aa3.85□□□□□ -1.79
SYNCRIP-202ENST00000369622 NEBP20929 6669 aa3.84□□□□□ -1.79
SYNCRIP-202ENST00000369622 KRTAP5-4Q6L8H1 288 aa3.7□□□□□ -1.82
SYNCRIP-202ENST00000369622 KRTAP4-11Q9BYQ6 195 aa3.68□□□□□ -1.82
SYNCRIP-202ENST00000369622 LCE1FQ5T754 118 aa3.67□□□□□ -1.82
SYNCRIP-202ENST00000369622 KRTAP20-2Q3LI61 65 aa3.6□□□□□ -1.83
SYNCRIP-202ENST00000369622 KRTAP20-1Q3LI63 56 aa3.58□□□□□ -1.84
SYNCRIP-202ENST00000369622 LCE4AQ5TA78 99 aa3.56□□□□□ -1.84
SYNCRIP-202ENST00000369622 HMCN1Q96RW7 5635 aa3.55□□□□□ -1.84
SYNCRIP-202ENST00000369622 KRTAP9-9Q9BYP9 154 aa3.5□□□□□ -1.85
SYNCRIP-202ENST00000369622 MUC5ACP98088 5654 aa3.49□□□□□ -1.85
SYNCRIP-202ENST00000369622 LCE1BQ5T7P3 118 aa3.48□□□□□ -1.85
SYNCRIP-202ENST00000369622 KRTAP5-2Q701N4 177 aa3.47□□□□□ -1.85
SYNCRIP-202ENST00000369622 KRTAP4-12Q9BQ66 201 aa3.43□□□□□ -1.86
SYNCRIP-202ENST00000369622 KRTAP5-3Q6L8H2 238 aa3.38□□□□□ -1.87
SYNCRIP-202ENST00000369622 KRTAP4-2Q9BYR5 136 aa3.31□□□□□ -1.88
SYNCRIP-202ENST00000369622 KRTAP5-10Q6L8G5 202 aa3.22□□□□□ -1.89
SYNCRIP-202ENST00000369622 KRTAP5-1Q6L8H4 278 aa3.08□□□□□ -1.92
SYNCRIP-202ENST00000369622 LCE1CQ5T751 118 aa3.03□□□□□ -1.92
SYNCRIP-202ENST00000369622 AHNAK2Q8IVF2 5795 aa2.92□□□□□ -1.94
SYNCRIP-202ENST00000369622 KRTAP21-2Q3LI59 83 aa2.92□□□□□ -1.94
SYNCRIP-202ENST00000369622 GPR98Q8WXG9 6306 aa2.92□□□□□ -1.94
SYNCRIP-202ENST00000369622 KRTAP4-4Q9BYR3 166 aa2.92□□□□□ -1.94
SYNCRIP-202ENST00000369622 KRTAP21-1Q3LI58 79 aa2.89□□□□□ -1.95
SYNCRIP-202ENST00000369622 KRTAP5-8O75690 187 aa2.78□□□□□ -1.96
SYNCRIP-202ENST00000369622 MUC5BQ9HC84 5762 aaPredicted RBP2.78□□□□□ -1.96
SYNCRIP-202ENST00000369622 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.78□□□□□ -1.96
SYNCRIP-202ENST00000369622 KRTAP5-7Q6L8G8 165 aa2.6□□□□□ -1.99
SYNCRIP-202ENST00000369622 KRTAP5-11Q6L8G4 156 aa2.57□□□□□ -2
SYNCRIP-202ENST00000369622 PHGR1C9JFL3 82 aa2.25□□□□□ -2.05
SYNCRIP-202ENST00000369622 AHNAKQ09666 5890 aaKnown RBP2.24□□□□□ -2.05
SYNCRIP-202ENST00000369622 MUC16Q8WXI7 14507 aa1.53□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 5.3 ms