RNA–Protein interactions for RNA: ENST00000369598.5

PHTF1-202, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 5 BASIC

Gene PHTF1, Length 3,000 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-202ENST00000369598 MT1EP04732 61 aa5.25□□□□□ -1.57
PHTF1-202ENST00000369598 SYNE1Q8NF91 8797 aaKnown RBP5.21□□□□□ -1.58
PHTF1-202ENST00000369598 MT1LQ93083 61 aa5.18□□□□□ -1.58
PHTF1-202ENST00000369598 KRTAP2-3P0C7H8 128 aa5.15□□□□□ -1.58
PHTF1-202ENST00000369598 KRTAP2-4Q9BYR9 128 aa5.15□□□□□ -1.58
PHTF1-202ENST00000369598 KRTAP2-1Q9BYU5 128 aa5.15□□□□□ -1.58
PHTF1-202ENST00000369598 KRTAP19-4Q3LI73 84 aa5.14□□□□□ -1.59
PHTF1-202ENST00000369598 MUC12Q9UKN1 5478 aa5.12□□□□□ -1.59
PHTF1-202ENST00000369598 LOC100996750A0A140TA64 210 aa5.1□□□□□ -1.59
PHTF1-202ENST00000369598 MACF1Q9UPN3 7388 aaKnown RBP5.09□□□□□ -1.59
PHTF1-202ENST00000369598 SPRR2FQ96RM1 72 aa5.09□□□□□ -1.59
PHTF1-202ENST00000369598 KRTAP19-3Q7Z4W3 81 aa5.03□□□□□ -1.6
PHTF1-202ENST00000369598 SYNE2Q8WXH0 6885 aaKnown RBP5.03□□□□□ -1.6
PHTF1-202ENST00000369598 KRTAP4-3Q9BYR4 195 aa5.02□□□□□ -1.61
PHTF1-202ENST00000369598 KRTAP12-4P60329 112 aa5.02□□□□□ -1.61
PHTF1-202ENST00000369598 MT1GP13640 62 aa5□□□□□ -1.61
PHTF1-202ENST00000369598 MT1MQ8N339 61 aa4.94□□□□□ -1.62
PHTF1-202ENST00000369598 LCE5AQ5TCM9 118 aa4.91□□□□□ -1.62
PHTF1-202ENST00000369598 KRTAP9-6A0A140TA67 174 aa4.91□□□□□ -1.62
PHTF1-202ENST00000369598 KRTAP5-9P26371 169 aa4.91□□□□□ -1.62
PHTF1-202ENST00000369598 KRTAP4-9Q9BYQ8 210 aa4.85□□□□□ -1.63
PHTF1-202ENST00000369598 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.83□□□□□ -1.64
PHTF1-202ENST00000369598 LCE1AQ5T7P2 110 aa4.81□□□□□ -1.64
PHTF1-202ENST00000369598 MDN1Q9NU22 5596 aa4.79□□□□□ -1.64
PHTF1-202ENST00000369598 SPRR2EP22531 72 aa4.78□□□□□ -1.64
PHTF1-202ENST00000369598 SPRR2BP35325 72 aa4.78□□□□□ -1.64
PHTF1-202ENST00000369598 SPRR2AP35326 72 aa4.78□□□□□ -1.64
PHTF1-202ENST00000369598 KRTAP6-3Q3LI67 103 aa4.76□□□□□ -1.65
PHTF1-202ENST00000369598 LCE3BQ5TA77 95 aa4.74□□□□□ -1.65
PHTF1-202ENST00000369598 KRTAP9-7A8MTY7 169 aa4.59□□□□□ -1.67
PHTF1-202ENST00000369598 SPRR2DP22532 72 aa4.59□□□□□ -1.67
PHTF1-202ENST00000369598 PRM1P04553 51 aa4.52□□□□□ -1.69
PHTF1-202ENST00000369598 KRTAP5-5Q701N2 237 aaPredicted RBP4.4□□□□□ -1.7
PHTF1-202ENST00000369598 MT1AP04731 61 aa4.38□□□□□ -1.71
PHTF1-202ENST00000369598 KRTAP6-1Q3LI64 71 aa4.38□□□□□ -1.71
PHTF1-202ENST00000369598 LCE3DQ9BYE3 92 aa4.38□□□□□ -1.71
PHTF1-202ENST00000369598 NEBP20929 6669 aa4.34□□□□□ -1.72
PHTF1-202ENST00000369598 LCE3EQ5T5B0 92 aa4.31□□□□□ -1.72
PHTF1-202ENST00000369598 KRTAP9-4Q9BYQ2 154 aa4.17□□□□□ -1.74
PHTF1-202ENST00000369598 KRTAP6-2Q3LI66 62 aa4.16□□□□□ -1.74
PHTF1-202ENST00000369598 KRTAP5-4Q6L8H1 288 aa4.13□□□□□ -1.75
PHTF1-202ENST00000369598 KRTAP2-2Q9BYT5 123 aa4.08□□□□□ -1.76
PHTF1-202ENST00000369598 LCE4AQ5TA78 99 aa4.03□□□□□ -1.76
PHTF1-202ENST00000369598 KRTAP20-1Q3LI63 56 aa4.03□□□□□ -1.77
PHTF1-202ENST00000369598 MT4P47944 62 aa4.02□□□□□ -1.77
PHTF1-202ENST00000369598 MT3P25713 68 aa3.99□□□□□ -1.77
PHTF1-202ENST00000369598 LCE1EQ5T753 118 aa3.99□□□□□ -1.77
PHTF1-202ENST00000369598 KRTAP4-6Q9BYQ5 205 aa3.99□□□□□ -1.77
PHTF1-202ENST00000369598 KRTAP20-2Q3LI61 65 aa3.89□□□□□ -1.79
PHTF1-202ENST00000369598 LCE1DQ5T752 114 aa3.88□□□□□ -1.79
PHTF1-202ENST00000369598 HMCN1Q96RW7 5635 aa3.82□□□□□ -1.8
PHTF1-202ENST00000369598 KRTAP5-2Q701N4 177 aa3.76□□□□□ -1.81
PHTF1-202ENST00000369598 MUC19Q7Z5P9 8384 aa3.74□□□□□ -1.81
PHTF1-202ENST00000369598 KRTAP5-3Q6L8H2 238 aa3.71□□□□□ -1.81
PHTF1-202ENST00000369598 KRTAP4-11Q9BYQ6 195 aa3.49□□□□□ -1.85
PHTF1-202ENST00000369598 MUC5ACP98088 5654 aa3.36□□□□□ -1.87
PHTF1-202ENST00000369598 LCE1BQ5T7P3 118 aa3.27□□□□□ -1.89
PHTF1-202ENST00000369598 KRTAP5-1Q6L8H4 278 aa3.25□□□□□ -1.89
PHTF1-202ENST00000369598 AHNAK2Q8IVF2 5795 aa3.25□□□□□ -1.89
PHTF1-202ENST00000369598 KRTAP5-8O75690 187 aa3.19□□□□□ -1.9
PHTF1-202ENST00000369598 KRTAP5-10Q6L8G5 202 aa3.18□□□□□ -1.9
PHTF1-202ENST00000369598 LCE1CQ5T751 118 aa3.17□□□□□ -1.9
PHTF1-202ENST00000369598 KRTAP4-2Q9BYR5 136 aa3.16□□□□□ -1.9
PHTF1-202ENST00000369598 KRTAP4-12Q9BQ66 201 aa3.16□□□□□ -1.9
PHTF1-202ENST00000369598 LCE1FQ5T754 118 aa3.11□□□□□ -1.91
PHTF1-202ENST00000369598 KRTAP5-7Q6L8G8 165 aa3.08□□□□□ -1.92
PHTF1-202ENST00000369598 KRTAP9-9Q9BYP9 154 aa3.03□□□□□ -1.92
PHTF1-202ENST00000369598 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.95□□□□□ -1.94
PHTF1-202ENST00000369598 MUC5BQ9HC84 5762 aaPredicted RBP2.92□□□□□ -1.94
PHTF1-202ENST00000369598 KRTAP4-4Q9BYR3 166 aa2.9□□□□□ -1.94
PHTF1-202ENST00000369598 KRTAP21-2Q3LI59 83 aa2.85□□□□□ -1.95
PHTF1-202ENST00000369598 GPR98Q8WXG9 6306 aa2.82□□□□□ -1.96
PHTF1-202ENST00000369598 KRTAP5-11Q6L8G4 156 aa2.76□□□□□ -1.97
PHTF1-202ENST00000369598 KRTAP21-1Q3LI58 79 aa2.61□□□□□ -1.99
PHTF1-202ENST00000369598 PHGR1C9JFL3 82 aa2.39□□□□□ -2.03
PHTF1-202ENST00000369598 AHNAKQ09666 5890 aaKnown RBP2.36□□□□□ -2.03
PHTF1-202ENST00000369598 MUC16Q8WXI7 14507 aa1.52□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 90.3 ms