RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 FSIP2Q5CZC0 6907 aa3.28□□□□□ -1.88
PRDM1-201ENST00000369089 MT1GP13640 62 aa3.27□□□□□ -1.89
PRDM1-201ENST00000369089 KRTAP4-7Q9BYR0 210 aa3.25□□□□□ -1.89
PRDM1-201ENST00000369089 SPRR2EP22531 72 aa3.25□□□□□ -1.89
PRDM1-201ENST00000369089 SPRR2BP35325 72 aa3.25□□□□□ -1.89
PRDM1-201ENST00000369089 SPRR2AP35326 72 aa3.25□□□□□ -1.89
PRDM1-201ENST00000369089 MT1LQ93083 61 aa3.2□□□□□ -1.9
PRDM1-201ENST00000369089 MT1EP04732 61 aa3.19□□□□□ -1.9
PRDM1-201ENST00000369089 KRTAP19-6Q3LI70 58 aa3.19□□□□□ -1.9
PRDM1-201ENST00000369089 SYNE1Q8NF91 8797 aaKnown RBP3.19□□□□□ -1.9
PRDM1-201ENST00000369089 KRTAP19-3Q7Z4W3 81 aa3.18□□□□□ -1.9
PRDM1-201ENST00000369089 KRTAP9-6A8MVA2 160 aa3.16□□□□□ -1.9
PRDM1-201ENST00000369089 MT3P25713 68 aa3.16□□□□□ -1.9
PRDM1-201ENST00000369089 SPRR2DP22532 72 aa3.13□□□□□ -1.91
PRDM1-201ENST00000369089 KRTAP19-7Q3SYF9 63 aa3.08□□□□□ -1.92
PRDM1-201ENST00000369089 KRTAP9-2Q9BYQ4 174 aa3.07□□□□□ -1.92
PRDM1-201ENST00000369089 LCE1AQ5T7P2 110 aa3.07□□□□□ -1.92
PRDM1-201ENST00000369089 MT1MQ8N339 61 aa3.06□□□□□ -1.92
PRDM1-201ENST00000369089 KRTAP9-6A0A140TA67 174 aa3.02□□□□□ -1.93
PRDM1-201ENST00000369089 KRTAP4-3Q9BYR4 195 aa3.01□□□□□ -1.93
PRDM1-201ENST00000369089 KRTAP9-7A8MTY7 169 aa3□□□□□ -1.93
PRDM1-201ENST00000369089 KRTAP4-9Q9BYQ8 210 aa2.98□□□□□ -1.93
PRDM1-201ENST00000369089 MT1AP04731 61 aa2.98□□□□□ -1.93
PRDM1-201ENST00000369089 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.93□□□□□ -1.94
PRDM1-201ENST00000369089 KRTAP6-2Q3LI66 62 aa2.93□□□□□ -1.94
PRDM1-201ENST00000369089 KRTAP2-2Q9BYT5 123 aa2.92□□□□□ -1.94
PRDM1-201ENST00000369089 LCE1EQ5T753 118 aa2.92□□□□□ -1.94
PRDM1-201ENST00000369089 KRTAP6-3Q3LI67 103 aa2.91□□□□□ -1.94
PRDM1-201ENST00000369089 USH2AO75445 5202 aa2.89□□□□□ -1.95
PRDM1-201ENST00000369089 OBSCNQ5VST9 7968 aa2.89□□□□□ -1.95
PRDM1-201ENST00000369089 FCGBPQ9Y6R7 5405 aaPredicted RBP2.84□□□□□ -1.96
PRDM1-201ENST00000369089 DSTQ03001 7570 aaKnown RBP2.81□□□□□ -1.96
PRDM1-201ENST00000369089 LCE5AQ5TCM9 118 aa2.79□□□□□ -1.96
PRDM1-201ENST00000369089 MT4P47944 62 aa2.78□□□□□ -1.96
PRDM1-201ENST00000369089 KMT2DO14686 5537 aa2.77□□□□□ -1.97
PRDM1-201ENST00000369089 SYNE2Q8WXH0 6885 aaKnown RBP2.76□□□□□ -1.97
PRDM1-201ENST00000369089 LCE1DQ5T752 114 aa2.75□□□□□ -1.97
PRDM1-201ENST00000369089 KRTAP9-9Q9BYP9 154 aa2.72□□□□□ -1.97
PRDM1-201ENST00000369089 KRTAP9-4Q9BYQ2 154 aa2.72□□□□□ -1.97
PRDM1-201ENST00000369089 KRTAP4-12Q9BQ66 201 aa2.71□□□□□ -1.98
PRDM1-201ENST00000369089 KRTAP6-1Q3LI64 71 aa2.69□□□□□ -1.98
PRDM1-201ENST00000369089 LCE4AQ5TA78 99 aa2.68□□□□□ -1.98
PRDM1-201ENST00000369089 KRTAP4-2Q9BYR5 136 aa2.67□□□□□ -1.98
PRDM1-201ENST00000369089 SSPOA2VEC9 5147 aa2.67□□□□□ -1.98
PRDM1-201ENST00000369089 MUC12Q9UKN1 5478 aa2.64□□□□□ -1.99
PRDM1-201ENST00000369089 LCE1FQ5T754 118 aa2.6□□□□□ -1.99
PRDM1-201ENST00000369089 MACF1Q9UPN3 7388 aaKnown RBP2.6□□□□□ -1.99
PRDM1-201ENST00000369089 KRTAP5-5Q701N2 237 aaPredicted RBP2.6□□□□□ -1.99
PRDM1-201ENST00000369089 LCE1BQ5T7P3 118 aa2.58□□□□□ -2
PRDM1-201ENST00000369089 KRTAP20-1Q3LI63 56 aa2.56□□□□□ -2
PRDM1-201ENST00000369089 KRTAP5-3Q6L8H2 238 aa2.56□□□□□ -2
PRDM1-201ENST00000369089 KRTAP5-9P26371 169 aa2.52□□□□□ -2.01
PRDM1-201ENST00000369089 KRTAP4-11Q9BYQ6 195 aa2.46□□□□□ -2.02
PRDM1-201ENST00000369089 MDN1Q9NU22 5596 aa2.4□□□□□ -2.02
PRDM1-201ENST00000369089 MUC19Q7Z5P9 8384 aa2.4□□□□□ -2.03
PRDM1-201ENST00000369089 NEBP20929 6669 aa2.31□□□□□ -2.04
PRDM1-201ENST00000369089 KRTAP20-2Q3LI61 65 aa2.24□□□□□ -2.05
PRDM1-201ENST00000369089 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.21□□□□□ -2.06
PRDM1-201ENST00000369089 GPR98Q8WXG9 6306 aa2.16□□□□□ -2.06
PRDM1-201ENST00000369089 KRTAP5-4Q6L8H1 288 aa2.08□□□□□ -2.08
PRDM1-201ENST00000369089 LCE1CQ5T751 118 aa2.08□□□□□ -2.08
PRDM1-201ENST00000369089 KRTAP5-2Q701N4 177 aa1.98□□□□□ -2.09
PRDM1-201ENST00000369089 MUC5ACP98088 5654 aa1.98□□□□□ -2.09
PRDM1-201ENST00000369089 HMCN1Q96RW7 5635 aa1.9□□□□□ -2.11
PRDM1-201ENST00000369089 KRTAP4-4Q9BYR3 166 aa1.87□□□□□ -2.11
PRDM1-201ENST00000369089 KRTAP5-10Q6L8G5 202 aa1.85□□□□□ -2.11
PRDM1-201ENST00000369089 KRTAP21-1Q3LI58 79 aa1.79□□□□□ -2.12
PRDM1-201ENST00000369089 AHNAK2Q8IVF2 5795 aa1.79□□□□□ -2.12
PRDM1-201ENST00000369089 KRTAP5-11Q6L8G4 156 aa1.74□□□□□ -2.13
PRDM1-201ENST00000369089 KRTAP5-8O75690 187 aa1.71□□□□□ -2.14
PRDM1-201ENST00000369089 KRTAP5-1Q6L8H4 278 aa1.6□□□□□ -2.15
PRDM1-201ENST00000369089 MUC5BQ9HC84 5762 aaPredicted RBP1.57□□□□□ -2.16
PRDM1-201ENST00000369089 KRTAP21-2Q3LI59 83 aa1.5□□□□□ -2.17
PRDM1-201ENST00000369089 AHNAKQ09666 5890 aaKnown RBP1.49□□□□□ -2.17
PRDM1-201ENST00000369089 KRTAP5-7Q6L8G8 165 aa1.34□□□□□ -2.2
PRDM1-201ENST00000369089 PHGR1C9JFL3 82 aa1.31□□□□□ -2.2
PRDM1-201ENST00000369089 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 31.8 ms