RNA–Protein interactions for RNA: ENST00000368262.7

CCT3-206, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 2

Gene CCT3, Length 2,048 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-206ENST00000368262 KRTAP4-7Q9BYR0 210 aa4.8□□□□□ -1.64
CCT3-206ENST00000368262 MT1LQ93083 61 aa4.78□□□□□ -1.64
CCT3-206ENST00000368262 SSPOA2VEC9 5147 aa4.76□□□□□ -1.65
CCT3-206ENST00000368262 MT1EP04732 61 aa4.73□□□□□ -1.65
CCT3-206ENST00000368262 SYNE2Q8WXH0 6885 aaKnown RBP4.72□□□□□ -1.65
CCT3-206ENST00000368262 KMT2DO14686 5537 aa4.67□□□□□ -1.66
CCT3-206ENST00000368262 FCGBPQ9Y6R7 5405 aaPredicted RBP4.64□□□□□ -1.67
CCT3-206ENST00000368262 MACF1Q9UPN3 7388 aaKnown RBP4.63□□□□□ -1.67
CCT3-206ENST00000368262 USH2AO75445 5202 aa4.62□□□□□ -1.67
CCT3-206ENST00000368262 NEBP20929 6669 aa4.6□□□□□ -1.67
CCT3-206ENST00000368262 KRTAP20-1Q3LI63 56 aa4.51□□□□□ -1.69
CCT3-206ENST00000368262 LOC100996750A0A140TA64 210 aa4.46□□□□□ -1.7
CCT3-206ENST00000368262 KRTAP6-3Q3LI67 103 aa4.45□□□□□ -1.7
CCT3-206ENST00000368262 KRTAP4-3Q9BYR4 195 aa4.42□□□□□ -1.7
CCT3-206ENST00000368262 MT1GP13640 62 aa4.41□□□□□ -1.7
CCT3-206ENST00000368262 KRTAP12-4P60329 112 aa4.41□□□□□ -1.7
CCT3-206ENST00000368262 MT1MQ8N339 61 aa4.4□□□□□ -1.7
CCT3-206ENST00000368262 KRTAP19-6Q3LI70 58 aa4.39□□□□□ -1.71
CCT3-206ENST00000368262 GPR98Q8WXG9 6306 aa4.37□□□□□ -1.71
CCT3-206ENST00000368262 KRTAP19-3Q7Z4W3 81 aa4.35□□□□□ -1.71
CCT3-206ENST00000368262 MUC12Q9UKN1 5478 aa4.32□□□□□ -1.72
CCT3-206ENST00000368262 MT1AP04731 61 aa4.21□□□□□ -1.74
CCT3-206ENST00000368262 LCE5AQ5TCM9 118 aa4.17□□□□□ -1.74
CCT3-206ENST00000368262 LCE3BQ5TA77 95 aa4.14□□□□□ -1.75
CCT3-206ENST00000368262 MDN1Q9NU22 5596 aa4.13□□□□□ -1.75
CCT3-206ENST00000368262 KRTAP4-9Q9BYQ8 210 aa4.09□□□□□ -1.76
CCT3-206ENST00000368262 KRTAP6-1Q3LI64 71 aa4.03□□□□□ -1.76
CCT3-206ENST00000368262 KRTAP5-5Q701N2 237 aaPredicted RBP4.03□□□□□ -1.76
CCT3-206ENST00000368262 LCE3DQ9BYE3 92 aa4.03□□□□□ -1.76
CCT3-206ENST00000368262 LCE3EQ5T5B0 92 aa4.02□□□□□ -1.77
CCT3-206ENST00000368262 KRTAP2-2Q9BYT5 123 aa3.99□□□□□ -1.77
CCT3-206ENST00000368262 SPRR2FQ96RM1 72 aa3.97□□□□□ -1.77
CCT3-206ENST00000368262 PRM1P04553 51 aa3.95□□□□□ -1.78
CCT3-206ENST00000368262 SYNE1Q8NF91 8797 aaKnown RBP3.92□□□□□ -1.78
CCT3-206ENST00000368262 KRTAP5-9P26371 169 aa3.89□□□□□ -1.79
CCT3-206ENST00000368262 DSTQ03001 7570 aaKnown RBP3.79□□□□□ -1.8
CCT3-206ENST00000368262 SPRR2EP22531 72 aa3.77□□□□□ -1.81
CCT3-206ENST00000368262 SPRR2BP35325 72 aa3.77□□□□□ -1.81
CCT3-206ENST00000368262 SPRR2AP35326 72 aa3.77□□□□□ -1.81
CCT3-206ENST00000368262 KRTAP6-2Q3LI66 62 aa3.77□□□□□ -1.81
CCT3-206ENST00000368262 KRTAP9-4Q9BYQ2 154 aa3.75□□□□□ -1.81
CCT3-206ENST00000368262 LCE1AQ5T7P2 110 aa3.71□□□□□ -1.81
CCT3-206ENST00000368262 AHNAK2Q8IVF2 5795 aa3.68□□□□□ -1.82
CCT3-206ENST00000368262 SPRR2DP22532 72 aa3.65□□□□□ -1.82
CCT3-206ENST00000368262 HMCN1Q96RW7 5635 aa3.61□□□□□ -1.83
CCT3-206ENST00000368262 MT3P25713 68 aa3.57□□□□□ -1.84
CCT3-206ENST00000368262 KRTAP5-10Q6L8G5 202 aa3.53□□□□□ -1.84
CCT3-206ENST00000368262 KRTAP5-7Q6L8G8 165 aa3.51□□□□□ -1.85
CCT3-206ENST00000368262 LCE4AQ5TA78 99 aa3.4□□□□□ -1.87
CCT3-206ENST00000368262 LCE1DQ5T752 114 aa3.38□□□□□ -1.87
CCT3-206ENST00000368262 AHNAKQ09666 5890 aaKnown RBP3.35□□□□□ -1.87
CCT3-206ENST00000368262 KRTAP9-9Q9BYP9 154 aa3.31□□□□□ -1.88
CCT3-206ENST00000368262 KRTAP4-6Q9BYQ5 205 aa3.31□□□□□ -1.88
CCT3-206ENST00000368262 KRTAP5-4Q6L8H1 288 aa3.28□□□□□ -1.88
CCT3-206ENST00000368262 OBSCNQ5VST9 7968 aa3.26□□□□□ -1.89
CCT3-206ENST00000368262 MT4P47944 62 aa3.26□□□□□ -1.89
CCT3-206ENST00000368262 KRTAP5-3Q6L8H2 238 aa3.26□□□□□ -1.89
CCT3-206ENST00000368262 MUC5BQ9HC84 5762 aaPredicted RBP3.2□□□□□ -1.9
CCT3-206ENST00000368262 KRTAP4-12Q9BQ66 201 aa3.16□□□□□ -1.9
CCT3-206ENST00000368262 KRTAP5-2Q701N4 177 aa3.14□□□□□ -1.91
CCT3-206ENST00000368262 MUC5ACP98088 5654 aa3.14□□□□□ -1.91
CCT3-206ENST00000368262 KRTAP20-2Q3LI61 65 aa3.03□□□□□ -1.92
CCT3-206ENST00000368262 LCE1EQ5T753 118 aa3□□□□□ -1.93
CCT3-206ENST00000368262 KRTAP4-11Q9BYQ6 195 aa2.93□□□□□ -1.94
CCT3-206ENST00000368262 KRTAP5-1Q6L8H4 278 aa2.91□□□□□ -1.94
CCT3-206ENST00000368262 KRTAP5-8O75690 187 aa2.79□□□□□ -1.96
CCT3-206ENST00000368262 LCE1BQ5T7P3 118 aa2.76□□□□□ -1.97
CCT3-206ENST00000368262 LCE1CQ5T751 118 aa2.72□□□□□ -1.97
CCT3-206ENST00000368262 KRTAP4-2Q9BYR5 136 aa2.72□□□□□ -1.97
CCT3-206ENST00000368262 LCE1FQ5T754 118 aa2.69□□□□□ -1.98
CCT3-206ENST00000368262 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.64□□□□□ -1.99
CCT3-206ENST00000368262 KRTAP21-2Q3LI59 83 aa2.62□□□□□ -1.99
CCT3-206ENST00000368262 KRTAP21-1Q3LI58 79 aa2.59□□□□□ -2
CCT3-206ENST00000368262 KRTAP5-11Q6L8G4 156 aa2.32□□□□□ -2.04
CCT3-206ENST00000368262 KRTAP4-4Q9BYR3 166 aa2.29□□□□□ -2.04
CCT3-206ENST00000368262 MUC19Q7Z5P9 8384 aa2.12□□□□□ -2.07
CCT3-206ENST00000368262 PHGR1C9JFL3 82 aa2.12□□□□□ -2.07
CCT3-206ENST00000368262 MUC16Q8WXI7 14507 aa1.37□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 216.5 ms