RNA–Protein interactions for RNA: ENST00000368063.5

NCSTN-202, Transcript of nicastrin, humanhuman

TSL 1 (best) BASIC

Gene NCSTN, Length 3,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-202ENST00000368063 KRTAP9-7A8MTY7 169 aa4.2□□□□□ -1.74
NCSTN-202ENST00000368063 KRTAP19-6Q3LI70 58 aa4.18□□□□□ -1.74
NCSTN-202ENST00000368063 USH2AO75445 5202 aa4.17□□□□□ -1.74
NCSTN-202ENST00000368063 MT1EP04732 61 aa4.14□□□□□ -1.75
NCSTN-202ENST00000368063 LOC100996750A0A140TA64 210 aa4.12□□□□□ -1.75
NCSTN-202ENST00000368063 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.12□□□□□ -1.75
NCSTN-202ENST00000368063 FSIP2Q5CZC0 6907 aa4.09□□□□□ -1.75
NCSTN-202ENST00000368063 SSPOA2VEC9 5147 aa4.07□□□□□ -1.76
NCSTN-202ENST00000368063 MT1GP13640 62 aa4.01□□□□□ -1.77
NCSTN-202ENST00000368063 KRTAP4-3Q9BYR4 195 aa4□□□□□ -1.77
NCSTN-202ENST00000368063 KRTAP6-3Q3LI67 103 aa3.97□□□□□ -1.77
NCSTN-202ENST00000368063 PRM1P04553 51 aa3.95□□□□□ -1.78
NCSTN-202ENST00000368063 KRTAP5-5Q701N2 237 aaPredicted RBP3.92□□□□□ -1.78
NCSTN-202ENST00000368063 KRTAP4-9Q9BYQ8 210 aa3.92□□□□□ -1.78
NCSTN-202ENST00000368063 KRTAP2-2Q9BYT5 123 aa3.92□□□□□ -1.78
NCSTN-202ENST00000368063 MT1AP04731 61 aa3.87□□□□□ -1.79
NCSTN-202ENST00000368063 LCE3BQ5TA77 95 aa3.86□□□□□ -1.79
NCSTN-202ENST00000368063 LCE1AQ5T7P2 110 aa3.84□□□□□ -1.79
NCSTN-202ENST00000368063 SYNE1Q8NF91 8797 aaKnown RBP3.84□□□□□ -1.8
NCSTN-202ENST00000368063 MT1MQ8N339 61 aa3.83□□□□□ -1.8
NCSTN-202ENST00000368063 LCE3EQ5T5B0 92 aa3.81□□□□□ -1.8
NCSTN-202ENST00000368063 KRTAP19-3Q7Z4W3 81 aa3.8□□□□□ -1.8
NCSTN-202ENST00000368063 LCE3DQ9BYE3 92 aa3.79□□□□□ -1.8
NCSTN-202ENST00000368063 FCGBPQ9Y6R7 5405 aaPredicted RBP3.76□□□□□ -1.81
NCSTN-202ENST00000368063 LCE5AQ5TCM9 118 aa3.69□□□□□ -1.82
NCSTN-202ENST00000368063 SPRR2FQ96RM1 72 aa3.69□□□□□ -1.82
NCSTN-202ENST00000368063 KRTAP20-1Q3LI63 56 aa3.67□□□□□ -1.82
NCSTN-202ENST00000368063 SYNE2Q8WXH0 6885 aaKnown RBP3.67□□□□□ -1.82
NCSTN-202ENST00000368063 MACF1Q9UPN3 7388 aaKnown RBP3.66□□□□□ -1.82
NCSTN-202ENST00000368063 MUC12Q9UKN1 5478 aa3.65□□□□□ -1.82
NCSTN-202ENST00000368063 KRTAP6-2Q3LI66 62 aa3.64□□□□□ -1.83
NCSTN-202ENST00000368063 KRTAP6-1Q3LI64 71 aa3.62□□□□□ -1.83
NCSTN-202ENST00000368063 NEBP20929 6669 aa3.62□□□□□ -1.83
NCSTN-202ENST00000368063 KRTAP5-9P26371 169 aa3.6□□□□□ -1.83
NCSTN-202ENST00000368063 DSTQ03001 7570 aaKnown RBP3.57□□□□□ -1.84
NCSTN-202ENST00000368063 LCE1EQ5T753 118 aa3.56□□□□□ -1.84
NCSTN-202ENST00000368063 SPRR2EP22531 72 aa3.44□□□□□ -1.86
NCSTN-202ENST00000368063 SPRR2BP35325 72 aa3.44□□□□□ -1.86
NCSTN-202ENST00000368063 SPRR2AP35326 72 aa3.44□□□□□ -1.86
NCSTN-202ENST00000368063 LCE1DQ5T752 114 aa3.44□□□□□ -1.86
NCSTN-202ENST00000368063 OBSCNQ5VST9 7968 aa3.43□□□□□ -1.86
NCSTN-202ENST00000368063 SPRR2DP22532 72 aa3.31□□□□□ -1.88
NCSTN-202ENST00000368063 KRTAP9-4Q9BYQ2 154 aa3.26□□□□□ -1.89
NCSTN-202ENST00000368063 GPR98Q8WXG9 6306 aa3.25□□□□□ -1.89
NCSTN-202ENST00000368063 MDN1Q9NU22 5596 aa3.25□□□□□ -1.89
NCSTN-202ENST00000368063 MT3P25713 68 aa3.1□□□□□ -1.91
NCSTN-202ENST00000368063 KRTAP5-4Q6L8H1 288 aa3.09□□□□□ -1.91
NCSTN-202ENST00000368063 LCE4AQ5TA78 99 aa2.99□□□□□ -1.93
NCSTN-202ENST00000368063 LCE1FQ5T754 118 aa2.96□□□□□ -1.94
NCSTN-202ENST00000368063 KRTAP4-11Q9BYQ6 195 aa2.93□□□□□ -1.94
NCSTN-202ENST00000368063 KRTAP5-10Q6L8G5 202 aa2.9□□□□□ -1.95
NCSTN-202ENST00000368063 KRTAP5-7Q6L8G8 165 aa2.9□□□□□ -1.95
NCSTN-202ENST00000368063 KRTAP20-2Q3LI61 65 aa2.85□□□□□ -1.95
NCSTN-202ENST00000368063 KRTAP5-2Q701N4 177 aa2.85□□□□□ -1.95
NCSTN-202ENST00000368063 HMCN1Q96RW7 5635 aa2.85□□□□□ -1.95
NCSTN-202ENST00000368063 KRTAP4-6Q9BYQ5 205 aa2.84□□□□□ -1.96
NCSTN-202ENST00000368063 AHNAK2Q8IVF2 5795 aa2.82□□□□□ -1.96
NCSTN-202ENST00000368063 MT4P47944 62 aa2.82□□□□□ -1.96
NCSTN-202ENST00000368063 MUC5ACP98088 5654 aa2.8□□□□□ -1.96
NCSTN-202ENST00000368063 KRTAP5-3Q6L8H2 238 aa2.74□□□□□ -1.97
NCSTN-202ENST00000368063 MUC19Q7Z5P9 8384 aa2.74□□□□□ -1.97
NCSTN-202ENST00000368063 KRTAP5-1Q6L8H4 278 aa2.61□□□□□ -1.99
NCSTN-202ENST00000368063 KRTAP21-1Q3LI58 79 aa2.58□□□□□ -2
NCSTN-202ENST00000368063 AHNAKQ09666 5890 aaKnown RBP2.57□□□□□ -2
NCSTN-202ENST00000368063 MUC5BQ9HC84 5762 aaPredicted RBP2.48□□□□□ -2.01
NCSTN-202ENST00000368063 LCE1CQ5T751 118 aa2.43□□□□□ -2.02
NCSTN-202ENST00000368063 LCE1BQ5T7P3 118 aa2.43□□□□□ -2.02
NCSTN-202ENST00000368063 KRTAP9-9Q9BYP9 154 aa2.42□□□□□ -2.02
NCSTN-202ENST00000368063 KRTAP4-2Q9BYR5 136 aa2.38□□□□□ -2.03
NCSTN-202ENST00000368063 KRTAP5-8O75690 187 aa2.34□□□□□ -2.03
NCSTN-202ENST00000368063 KRTAP21-2Q3LI59 83 aa2.32□□□□□ -2.04
NCSTN-202ENST00000368063 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.32□□□□□ -2.04
NCSTN-202ENST00000368063 KRTAP4-4Q9BYR3 166 aa2.13□□□□□ -2.07
NCSTN-202ENST00000368063 KRTAP5-11Q6L8G4 156 aa2.12□□□□□ -2.07
NCSTN-202ENST00000368063 KRTAP4-12Q9BQ66 201 aa2.06□□□□□ -2.08
NCSTN-202ENST00000368063 PHGR1C9JFL3 82 aa1.8□□□□□ -2.12
NCSTN-202ENST00000368063 MUC16Q8WXI7 14507 aa1.28□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 49.5 ms