RNA–Protein interactions for RNA: ENST00000367404.8

NUP43-203, Transcript of nucleoporin 43, humanhuman

TSL 2 BASIC

Gene NUP43, Length 1,089 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-203ENST00000367404 CAMK2N1Q7Z7J9 78 aa3.54□□□□□ -1.84
NUP43-203ENST00000367404 PP632Q6XCG6 107 aa3.53□□□□□ -1.84
NUP43-203ENST00000367404 MT1MQ8N339 61 aa3.52□□□□□ -1.85
NUP43-203ENST00000367404 KRTAP19-5Q3LI72 72 aa3.51□□□□□ -1.85
NUP43-203ENST00000367404 KRTAP5-7Q6L8G8 165 aa3.48□□□□□ -1.85
NUP43-203ENST00000367404 A0A0D9SG42 100 aa3.47□□□□□ -1.85
NUP43-203ENST00000367404 MT1LQ93083 61 aa3.47□□□□□ -1.85
NUP43-203ENST00000367404 CHKB-CPT1BH3BT56 60 aa3.46□□□□□ -1.86
NUP43-203ENST00000367404 SCGB1A1P11684 91 aa3.44□□□□□ -1.86
NUP43-203ENST00000367404 PCP4L1A6NKN8 68 aa3.41□□□□□ -1.86
NUP43-203ENST00000367404 A8MU10 97 aa3.37□□□□□ -1.87
NUP43-203ENST00000367404 KRTAP5-2Q701N4 177 aa3.35□□□□□ -1.87
NUP43-203ENST00000367404 KRTAP20-2Q3LI61 65 aa3.34□□□□□ -1.87
NUP43-203ENST00000367404 SPANXA2-OT1Q8N9U9 137 aa3.33□□□□□ -1.88
NUP43-203ENST00000367404 KRTAP12-1P59990 96 aa3.32□□□□□ -1.88
NUP43-203ENST00000367404 SPINT4Q6UDR6 99 aa3.32□□□□□ -1.88
NUP43-203ENST00000367404 SMIM20Q8N5G0 67 aa3.32□□□□□ -1.88
NUP43-203ENST00000367404 C10orf95Q9H7T3 257 aa3.32□□□□□ -1.88
NUP43-203ENST00000367404 J3QR89 54 aa3.3□□□□□ -1.88
NUP43-203ENST00000367404 SPATA8Q6RVD6 105 aa3.3□□□□□ -1.88
NUP43-203ENST00000367404 SPRR5A0A1B0GTR4 108 aa3.29□□□□□ -1.88
NUP43-203ENST00000367404 KRTAP5-5Q701N2 237 aaPredicted RBP3.29□□□□□ -1.88
NUP43-203ENST00000367404 SNURFQ9Y675 71 aa3.29□□□□□ -1.88
NUP43-203ENST00000367404 SYNE1Q8NF91 8797 aaKnown RBP3.26□□□□□ -1.89
NUP43-203ENST00000367404 A0A1B0GU33 70 aa3.24□□□□□ -1.89
NUP43-203ENST00000367404 A0A1B0GV90 55 aa3.24□□□□□ -1.89
NUP43-203ENST00000367404 SEC61GP60059 68 aa3.24□□□□□ -1.89
NUP43-203ENST00000367404 SERP1Q9Y6X1 66 aa3.24□□□□□ -1.89
NUP43-203ENST00000367404 COA5Q86WW8 74 aa3.23□□□□□ -1.89
NUP43-203ENST00000367404 TNP1P09430 55 aa3.21□□□□□ -1.9
NUP43-203ENST00000367404 KRTAP12-4P60329 112 aa3.2□□□□□ -1.9
NUP43-203ENST00000367404 KRTAP12-3P60328 96 aa3.17□□□□□ -1.9
NUP43-203ENST00000367404 SMIM26A0A096LP01 95 aa3.15□□□□□ -1.91
NUP43-203ENST00000367404 SERP2Q8N6R1 65 aa3.12□□□□□ -1.91
NUP43-203ENST00000367404 AHNAKQ09666 5890 aaKnown RBP3.12□□□□□ -1.91
NUP43-203ENST00000367404 MUC5BQ9HC84 5762 aaPredicted RBP3.12□□□□□ -1.91
NUP43-203ENST00000367404 LCE1CQ5T751 118 aa3.1□□□□□ -1.91
NUP43-203ENST00000367404 LCE1BQ5T7P3 118 aa3.1□□□□□ -1.91
NUP43-203ENST00000367404 MUC5ACP98088 5654 aa3.08□□□□□ -1.92
NUP43-203ENST00000367404 A0A1B0GU69 56 aa3.05□□□□□ -1.92
NUP43-203ENST00000367404 K7ERU9 68 aa3.05□□□□□ -1.92
NUP43-203ENST00000367404 KRTAP5-8O75690 187 aa3.01□□□□□ -1.93
NUP43-203ENST00000367404 H7BZZ5 65 aa2.99□□□□□ -1.93
NUP43-203ENST00000367404 MT1AP04731 61 aa2.95□□□□□ -1.94
NUP43-203ENST00000367404 COX7CP15954 63 aa2.94□□□□□ -1.94
NUP43-203ENST00000367404 KRTAP6-1Q3LI64 71 aa2.94□□□□□ -1.94
NUP43-203ENST00000367404 KRTAP25-1Q3LHN0 102 aa2.92□□□□□ -1.94
NUP43-203ENST00000367404 LCE3DQ9BYE3 92 aa2.88□□□□□ -1.95
NUP43-203ENST00000367404 PRR15LQ9BU68 103 aa2.87□□□□□ -1.95
NUP43-203ENST00000367404 KRTAP6-2Q3LI66 62 aa2.85□□□□□ -1.95
NUP43-203ENST00000367404 LINC01558Q9Y6Z2 57 aa2.82□□□□□ -1.96
NUP43-203ENST00000367404 UQCR11O14957 56 aa2.78□□□□□ -1.96
NUP43-203ENST00000367404 ATP5EP56381 51 aaPredicted RBP2.71□□□□□ -1.98
NUP43-203ENST00000367404 MIR22HGQ0VDD5 57 aa2.69□□□□□ -1.98
NUP43-203ENST00000367404 K7ERS5 55 aa2.67□□□□□ -1.98
NUP43-203ENST00000367404 ANAPC13Q9BS18 74 aa2.66□□□□□ -1.98
NUP43-203ENST00000367404 CCDC179H3BU77 68 aa2.64□□□□□ -1.99
NUP43-203ENST00000367404 V9GYY9 64 aa2.63□□□□□ -1.99
NUP43-203ENST00000367404 MUC19Q7Z5P9 8384 aa2.61□□□□□ -1.99
NUP43-203ENST00000367404 RPS28P62857 69 aaKnown RBP2.54□□□□□ -2
NUP43-203ENST00000367404 TMEM258P61165 79 aa2.53□□□□□ -2
NUP43-203ENST00000367404 CDC42SE1Q9NRR8 79 aa2.51□□□□□ -2.01
NUP43-203ENST00000367404 Q1T7F1 81 aa2.5□□□□□ -2.01
NUP43-203ENST00000367404 PSPHP1O15172 72 aa2.47□□□□□ -2.01
NUP43-203ENST00000367404 ROMO1P60602 79 aa2.46□□□□□ -2.02
NUP43-203ENST00000367404 PRO0628Q9UI54 55 aa2.43□□□□□ -2.02
NUP43-203ENST00000367404 A6NED7 52 aa2.36□□□□□ -2.03
NUP43-203ENST00000367404 PMAIP1Q13794 54 aa2.33□□□□□ -2.04
NUP43-203ENST00000367404 KRTAP21-2Q3LI59 83 aa2.23□□□□□ -2.05
NUP43-203ENST00000367404 KTN1-AS1Q86SY8 53 aa2.18□□□□□ -2.06
NUP43-203ENST00000367404 BRK1Q8WUW1 75 aa2.17□□□□□ -2.06
NUP43-203ENST00000367404 LUZP6Q538Z0 58 aa2.11□□□□□ -2.07
NUP43-203ENST00000367404 PHGR1C9JFL3 82 aa2.07□□□□□ -2.08
NUP43-203ENST00000367404 KRTAP21-1Q3LI58 79 aa1.59□□□□□ -2.15
NUP43-203ENST00000367404 INE1O15225 51 aa1.57□□□□□ -2.16
NUP43-203ENST00000367404 MUC16Q8WXI7 14507 aa1.28□□□□□ -2.2
NUP43-203ENST00000367404 PRM1P04553 51 aa1.24□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 59.5 ms