RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 LOC100996750A0A140TA64 210 aa4.12□□□□□ -1.75
PTPN7-202ENST00000367279 MUC12Q9UKN1 5478 aa4.09□□□□□ -1.75
PTPN7-202ENST00000367279 FCGBPQ9Y6R7 5405 aaPredicted RBP4.09□□□□□ -1.76
PTPN7-202ENST00000367279 MT1GP13640 62 aa4.08□□□□□ -1.76
PTPN7-202ENST00000367279 KRTAP19-6Q3LI70 58 aa4.06□□□□□ -1.76
PTPN7-202ENST00000367279 KRTAP19-4Q3LI73 84 aa4.04□□□□□ -1.76
PTPN7-202ENST00000367279 DSTQ03001 7570 aaKnown RBP4.03□□□□□ -1.76
PTPN7-202ENST00000367279 LCE2DQ5TA82 110 aaPredicted RBP4□□□□□ -1.77
PTPN7-202ENST00000367279 MT1MQ8N339 61 aa3.96□□□□□ -1.77
PTPN7-202ENST00000367279 KRTAP19-3Q7Z4W3 81 aa3.96□□□□□ -1.78
PTPN7-202ENST00000367279 SPRR2FQ96RM1 72 aa3.92□□□□□ -1.78
PTPN7-202ENST00000367279 KRTAP12-4P60329 112 aa3.82□□□□□ -1.8
PTPN7-202ENST00000367279 LCE3BQ5TA77 95 aa3.82□□□□□ -1.8
PTPN7-202ENST00000367279 SYNE1Q8NF91 8797 aaKnown RBP3.81□□□□□ -1.8
PTPN7-202ENST00000367279 MACF1Q9UPN3 7388 aaKnown RBP3.8□□□□□ -1.8
PTPN7-202ENST00000367279 LCE5AQ5TCM9 118 aa3.76□□□□□ -1.81
PTPN7-202ENST00000367279 KRTAP4-9Q9BYQ8 210 aa3.74□□□□□ -1.81
PTPN7-202ENST00000367279 SYNE2Q8WXH0 6885 aaKnown RBP3.72□□□□□ -1.81
PTPN7-202ENST00000367279 MDN1Q9NU22 5596 aa3.66□□□□□ -1.82
PTPN7-202ENST00000367279 KRTAP6-1Q3LI64 71 aa3.64□□□□□ -1.83
PTPN7-202ENST00000367279 OBSCNQ5VST9 7968 aa3.57□□□□□ -1.84
PTPN7-202ENST00000367279 MT1AP04731 61 aa3.53□□□□□ -1.84
PTPN7-202ENST00000367279 SPRR2EP22531 72 aa3.53□□□□□ -1.84
PTPN7-202ENST00000367279 SPRR2BP35325 72 aa3.53□□□□□ -1.84
PTPN7-202ENST00000367279 SPRR2AP35326 72 aa3.53□□□□□ -1.84
PTPN7-202ENST00000367279 LCE3DQ9BYE3 92 aa3.53□□□□□ -1.84
PTPN7-202ENST00000367279 LCE1AQ5T7P2 110 aa3.52□□□□□ -1.85
PTPN7-202ENST00000367279 KRTAP9-2Q9BYQ4 174 aa3.48□□□□□ -1.85
PTPN7-202ENST00000367279 LCE3EQ5T5B0 92 aa3.47□□□□□ -1.85
PTPN7-202ENST00000367279 KRTAP9-7A8MTY7 169 aa3.43□□□□□ -1.86
PTPN7-202ENST00000367279 KRTAP5-9P26371 169 aa3.39□□□□□ -1.87
PTPN7-202ENST00000367279 PRM1P04553 51 aa3.39□□□□□ -1.87
PTPN7-202ENST00000367279 KRTAP5-5Q701N2 237 aaPredicted RBP3.39□□□□□ -1.87
PTPN7-202ENST00000367279 SPRR2DP22532 72 aa3.37□□□□□ -1.87
PTPN7-202ENST00000367279 KRTAP9-4Q9BYQ2 154 aa3.32□□□□□ -1.88
PTPN7-202ENST00000367279 KRTAP6-2Q3LI66 62 aa3.28□□□□□ -1.88
PTPN7-202ENST00000367279 MT3P25713 68 aa3.21□□□□□ -1.9
PTPN7-202ENST00000367279 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.13□□□□□ -1.91
PTPN7-202ENST00000367279 KRTAP6-3Q3LI67 103 aa3.11□□□□□ -1.91
PTPN7-202ENST00000367279 MT4P47944 62 aa3.05□□□□□ -1.92
PTPN7-202ENST00000367279 KRTAP4-6Q9BYQ5 205 aa3□□□□□ -1.93
PTPN7-202ENST00000367279 LCE1EQ5T753 118 aa2.95□□□□□ -1.94
PTPN7-202ENST00000367279 KRTAP9-6A0A140TA67 174 aa2.94□□□□□ -1.94
PTPN7-202ENST00000367279 KRTAP5-4Q6L8H1 288 aa2.93□□□□□ -1.94
PTPN7-202ENST00000367279 NEBP20929 6669 aa2.92□□□□□ -1.94
PTPN7-202ENST00000367279 KRTAP2-2Q9BYT5 123 aa2.91□□□□□ -1.94
PTPN7-202ENST00000367279 KRTAP20-2Q3LI61 65 aa2.85□□□□□ -1.95
PTPN7-202ENST00000367279 LCE1DQ5T752 114 aa2.82□□□□□ -1.96
PTPN7-202ENST00000367279 HMCN1Q96RW7 5635 aa2.8□□□□□ -1.96
PTPN7-202ENST00000367279 LCE4AQ5TA78 99 aa2.78□□□□□ -1.96
PTPN7-202ENST00000367279 LCE1BQ5T7P3 118 aa2.74□□□□□ -1.97
PTPN7-202ENST00000367279 KRTAP5-2Q701N4 177 aa2.74□□□□□ -1.97
PTPN7-202ENST00000367279 MUC5ACP98088 5654 aa2.73□□□□□ -1.97
PTPN7-202ENST00000367279 MUC19Q7Z5P9 8384 aa2.69□□□□□ -1.98
PTPN7-202ENST00000367279 KRTAP5-3Q6L8H2 238 aa2.64□□□□□ -1.99
PTPN7-202ENST00000367279 KRTAP20-1Q3LI63 56 aa2.63□□□□□ -1.99
PTPN7-202ENST00000367279 KRTAP4-11Q9BYQ6 195 aa2.59□□□□□ -1.99
PTPN7-202ENST00000367279 KRTAP5-10Q6L8G5 202 aa2.5□□□□□ -2.01
PTPN7-202ENST00000367279 LCE1FQ5T754 118 aa2.49□□□□□ -2.01
PTPN7-202ENST00000367279 KRTAP4-2Q9BYR5 136 aa2.43□□□□□ -2.02
PTPN7-202ENST00000367279 KRTAP5-1Q6L8H4 278 aa2.4□□□□□ -2.03
PTPN7-202ENST00000367279 LCE1CQ5T751 118 aa2.38□□□□□ -2.03
PTPN7-202ENST00000367279 KRTAP21-2Q3LI59 83 aa2.28□□□□□ -2.04
PTPN7-202ENST00000367279 KRTAP4-4Q9BYR3 166 aa2.28□□□□□ -2.04
PTPN7-202ENST00000367279 KRTAP5-8O75690 187 aa2.21□□□□□ -2.06
PTPN7-202ENST00000367279 AHNAK2Q8IVF2 5795 aa2.2□□□□□ -2.06
PTPN7-202ENST00000367279 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.18□□□□□ -2.06
PTPN7-202ENST00000367279 KRTAP4-12Q9BQ66 201 aa2.14□□□□□ -2.07
PTPN7-202ENST00000367279 MUC5BQ9HC84 5762 aaPredicted RBP2.13□□□□□ -2.07
PTPN7-202ENST00000367279 KRTAP5-7Q6L8G8 165 aa2.06□□□□□ -2.08
PTPN7-202ENST00000367279 KRTAP5-11Q6L8G4 156 aa2.03□□□□□ -2.08
PTPN7-202ENST00000367279 KRTAP21-1Q3LI58 79 aa2.01□□□□□ -2.09
PTPN7-202ENST00000367279 KRTAP9-9Q9BYP9 154 aa1.93□□□□□ -2.1
PTPN7-202ENST00000367279 GPR98Q8WXG9 6306 aa1.88□□□□□ -2.11
PTPN7-202ENST00000367279 PHGR1C9JFL3 82 aa1.78□□□□□ -2.13
PTPN7-202ENST00000367279 AHNAKQ09666 5890 aaKnown RBP1.62□□□□□ -2.15
PTPN7-202ENST00000367279 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 60.3 ms