RNA–Protein interactions for RNA: ENST00000366510.3

SCCPDH-201, Transcript of saccharopine dehydrogenase (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCCPDH, Length 2,503 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCCPDH-201ENST00000366510 KRTAP19-4Q3LI73 84 aa8.48□□□□□ -1.05
SCCPDH-201ENST00000366510 MACF1Q9UPN3 7388 aaKnown RBP8.42□□□□□ -1.06
SCCPDH-201ENST00000366510 LOC100996750A0A140TA64 210 aa8.41□□□□□ -1.06
SCCPDH-201ENST00000366510 KRTAP19-3Q7Z4W3 81 aa8.38□□□□□ -1.07
SCCPDH-201ENST00000366510 MT1MQ8N339 61 aa8.35□□□□□ -1.07
SCCPDH-201ENST00000366510 SPRR2FQ96RM1 72 aa8.33□□□□□ -1.08
SCCPDH-201ENST00000366510 DSTQ03001 7570 aaKnown RBP8.33□□□□□ -1.08
SCCPDH-201ENST00000366510 MT1GP13640 62 aa8.32□□□□□ -1.08
SCCPDH-201ENST00000366510 KRTAP2-3P0C7H8 128 aa8.31□□□□□ -1.08
SCCPDH-201ENST00000366510 KRTAP2-4Q9BYR9 128 aa8.31□□□□□ -1.08
SCCPDH-201ENST00000366510 KRTAP2-1Q9BYU5 128 aa8.31□□□□□ -1.08
SCCPDH-201ENST00000366510 CRCT1Q9UGL9 99 aa8.22□□□□□ -1.09
SCCPDH-201ENST00000366510 SYNE2Q8WXH0 6885 aaKnown RBP8.2□□□□□ -1.1
SCCPDH-201ENST00000366510 KRTAP9-2Q9BYQ4 174 aa8.18□□□□□ -1.1
SCCPDH-201ENST00000366510 LCE5AQ5TCM9 118 aa8.14□□□□□ -1.11
SCCPDH-201ENST00000366510 MDN1Q9NU22 5596 aa8.08□□□□□ -1.12
SCCPDH-201ENST00000366510 LCE1AQ5T7P2 110 aa7.78□□□□□ -1.16
SCCPDH-201ENST00000366510 KRTAP5-9P26371 169 aa7.75□□□□□ -1.17
SCCPDH-201ENST00000366510 SPRR2EP22531 72 aa7.65□□□□□ -1.18
SCCPDH-201ENST00000366510 SPRR2BP35325 72 aa7.65□□□□□ -1.18
SCCPDH-201ENST00000366510 SPRR2AP35326 72 aa7.65□□□□□ -1.18
SCCPDH-201ENST00000366510 LCE3BQ5TA77 95 aa7.62□□□□□ -1.19
SCCPDH-201ENST00000366510 SYNE1Q8NF91 8797 aaKnown RBP7.58□□□□□ -1.2
SCCPDH-201ENST00000366510 KRTAP6-1Q3LI64 71 aa7.56□□□□□ -1.2
SCCPDH-201ENST00000366510 KRTAP4-9Q9BYQ8 210 aa7.46□□□□□ -1.22
SCCPDH-201ENST00000366510 MT1AP04731 61 aa7.41□□□□□ -1.22
SCCPDH-201ENST00000366510 KRTAP5-5Q701N2 237 aaPredicted RBP7.38□□□□□ -1.23
SCCPDH-201ENST00000366510 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.35□□□□□ -1.23
SCCPDH-201ENST00000366510 KRTAP12-4P60329 112 aa7.35□□□□□ -1.23
SCCPDH-201ENST00000366510 SPRR2DP22532 72 aa7.32□□□□□ -1.24
SCCPDH-201ENST00000366510 KRTAP6-3Q3LI67 103 aa7.24□□□□□ -1.25
SCCPDH-201ENST00000366510 KRTAP9-6A0A140TA67 174 aa7.14□□□□□ -1.27
SCCPDH-201ENST00000366510 KRTAP9-4Q9BYQ2 154 aa7□□□□□ -1.29
SCCPDH-201ENST00000366510 LCE3DQ9BYE3 92 aa7□□□□□ -1.29
SCCPDH-201ENST00000366510 OBSCNQ5VST9 7968 aa6.95□□□□□ -1.3
SCCPDH-201ENST00000366510 LCE3EQ5T5B0 92 aa6.85□□□□□ -1.31
SCCPDH-201ENST00000366510 KRTAP6-2Q3LI66 62 aa6.84□□□□□ -1.31
SCCPDH-201ENST00000366510 NEBP20929 6669 aa6.8□□□□□ -1.32
SCCPDH-201ENST00000366510 KRTAP9-7A8MTY7 169 aa6.69□□□□□ -1.34
SCCPDH-201ENST00000366510 MT3P25713 68 aa6.67□□□□□ -1.34
SCCPDH-201ENST00000366510 PRM1P04553 51 aa6.64□□□□□ -1.35
SCCPDH-201ENST00000366510 KRTAP2-2Q9BYT5 123 aa6.64□□□□□ -1.35
SCCPDH-201ENST00000366510 KRTAP5-4Q6L8H1 288 aa6.62□□□□□ -1.35
SCCPDH-201ENST00000366510 KRTAP4-6Q9BYQ5 205 aa6.54□□□□□ -1.36
SCCPDH-201ENST00000366510 MT4P47944 62 aa6.52□□□□□ -1.37
SCCPDH-201ENST00000366510 HMCN1Q96RW7 5635 aa6.3□□□□□ -1.4
SCCPDH-201ENST00000366510 KRTAP20-2Q3LI61 65 aa6.29□□□□□ -1.4
SCCPDH-201ENST00000366510 LCE4AQ5TA78 99 aa6.25□□□□□ -1.41
SCCPDH-201ENST00000366510 LCE1DQ5T752 114 aa6.16□□□□□ -1.42
SCCPDH-201ENST00000366510 LCE1EQ5T753 118 aa6.14□□□□□ -1.43
SCCPDH-201ENST00000366510 KRTAP5-2Q701N4 177 aa6.14□□□□□ -1.43
SCCPDH-201ENST00000366510 KRTAP5-3Q6L8H2 238 aa5.98□□□□□ -1.45
SCCPDH-201ENST00000366510 KRTAP20-1Q3LI63 56 aa5.96□□□□□ -1.45
SCCPDH-201ENST00000366510 MUC5ACP98088 5654 aa5.69□□□□□ -1.5
SCCPDH-201ENST00000366510 LCE1BQ5T7P3 118 aa5.55□□□□□ -1.52
SCCPDH-201ENST00000366510 KRTAP5-1Q6L8H4 278 aa5.3□□□□□ -1.56
SCCPDH-201ENST00000366510 KRTAP4-2Q9BYR5 136 aa5.29□□□□□ -1.56
SCCPDH-201ENST00000366510 KRTAP4-11Q9BYQ6 195 aa5.28□□□□□ -1.56
SCCPDH-201ENST00000366510 KRTAP5-10Q6L8G5 202 aa5.24□□□□□ -1.57
SCCPDH-201ENST00000366510 LCE1CQ5T751 118 aa5.19□□□□□ -1.58
SCCPDH-201ENST00000366510 LCE1FQ5T754 118 aa5.16□□□□□ -1.58
SCCPDH-201ENST00000366510 AHNAK2Q8IVF2 5795 aa5.07□□□□□ -1.6
SCCPDH-201ENST00000366510 KRTAP5-8O75690 187 aa5.05□□□□□ -1.6
SCCPDH-201ENST00000366510 KRTAP21-2Q3LI59 83 aa4.86□□□□□ -1.63
SCCPDH-201ENST00000366510 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.84□□□□□ -1.64
SCCPDH-201ENST00000366510 KRTAP5-7Q6L8G8 165 aa4.83□□□□□ -1.64
SCCPDH-201ENST00000366510 MUC5BQ9HC84 5762 aaPredicted RBP4.68□□□□□ -1.66
SCCPDH-201ENST00000366510 KRTAP4-4Q9BYR3 166 aa4.57□□□□□ -1.68
SCCPDH-201ENST00000366510 KRTAP5-11Q6L8G4 156 aa4.49□□□□□ -1.69
SCCPDH-201ENST00000366510 KRTAP4-12Q9BQ66 201 aa4.46□□□□□ -1.69
SCCPDH-201ENST00000366510 GPR98Q8WXG9 6306 aa4.44□□□□□ -1.7
SCCPDH-201ENST00000366510 MUC19Q7Z5P9 8384 aa4.41□□□□□ -1.7
SCCPDH-201ENST00000366510 KRTAP9-9Q9BYP9 154 aa4.32□□□□□ -1.72
SCCPDH-201ENST00000366510 KRTAP21-1Q3LI58 79 aa4.27□□□□□ -1.73
SCCPDH-201ENST00000366510 PHGR1C9JFL3 82 aa3.9□□□□□ -1.78
SCCPDH-201ENST00000366510 AHNAKQ09666 5890 aaKnown RBP3.6□□□□□ -1.83
SCCPDH-201ENST00000366510 MUC16Q8WXI7 14507 aa2.52□□□□□ -2.01
Retrieved 77 of 20,778 RNA–protein pairs in 64.7 ms