RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 MT1EP04732 61 aa6.64□□□□□ -1.35
TRIM58-201ENST00000366481 CRCT1Q9UGL9 99 aa6.63□□□□□ -1.35
TRIM58-201ENST00000366481 SYNE2Q8WXH0 6885 aaKnown RBP6.61□□□□□ -1.35
TRIM58-201ENST00000366481 KRTAP4-3Q9BYR4 195 aa6.61□□□□□ -1.35
TRIM58-201ENST00000366481 MACF1Q9UPN3 7388 aaKnown RBP6.6□□□□□ -1.35
TRIM58-201ENST00000366481 LOC100996750A0A140TA64 210 aa6.57□□□□□ -1.36
TRIM58-201ENST00000366481 SYNE1Q8NF91 8797 aaKnown RBP6.52□□□□□ -1.37
TRIM58-201ENST00000366481 OBSCNQ5VST9 7968 aa6.5□□□□□ -1.37
TRIM58-201ENST00000366481 KRTAP19-6Q3LI70 58 aa6.44□□□□□ -1.38
TRIM58-201ENST00000366481 MT1GP13640 62 aa6.43□□□□□ -1.38
TRIM58-201ENST00000366481 KRTAP12-4P60329 112 aa6.43□□□□□ -1.38
TRIM58-201ENST00000366481 SPRR2FQ96RM1 72 aa6.38□□□□□ -1.39
TRIM58-201ENST00000366481 LCE2DQ5TA82 110 aaPredicted RBP6.37□□□□□ -1.39
TRIM58-201ENST00000366481 MDN1Q9NU22 5596 aa6.36□□□□□ -1.39
TRIM58-201ENST00000366481 KRTAP19-4Q3LI73 84 aa6.25□□□□□ -1.41
TRIM58-201ENST00000366481 MT1MQ8N339 61 aa6.21□□□□□ -1.41
TRIM58-201ENST00000366481 KRTAP19-3Q7Z4W3 81 aa6.18□□□□□ -1.42
TRIM58-201ENST00000366481 KRTAP9-2Q9BYQ4 174 aa6.17□□□□□ -1.42
TRIM58-201ENST00000366481 LCE3BQ5TA77 95 aa6.07□□□□□ -1.44
TRIM58-201ENST00000366481 KRTAP4-9Q9BYQ8 210 aa6.03□□□□□ -1.44
TRIM58-201ENST00000366481 LCE5AQ5TCM9 118 aa5.92□□□□□ -1.46
TRIM58-201ENST00000366481 SPRR2EP22531 72 aa5.82□□□□□ -1.48
TRIM58-201ENST00000366481 SPRR2BP35325 72 aa5.82□□□□□ -1.48
TRIM58-201ENST00000366481 SPRR2AP35326 72 aa5.82□□□□□ -1.48
TRIM58-201ENST00000366481 KRTAP6-1Q3LI64 71 aa5.75□□□□□ -1.49
TRIM58-201ENST00000366481 PRM1P04553 51 aa5.75□□□□□ -1.49
TRIM58-201ENST00000366481 LCE3DQ9BYE3 92 aa5.74□□□□□ -1.49
TRIM58-201ENST00000366481 KRTAP9-7A8MTY7 169 aa5.73□□□□□ -1.49
TRIM58-201ENST00000366481 LCE3EQ5T5B0 92 aa5.68□□□□□ -1.5
TRIM58-201ENST00000366481 LCE1AQ5T7P2 110 aa5.67□□□□□ -1.5
TRIM58-201ENST00000366481 MT1AP04731 61 aa5.55□□□□□ -1.52
TRIM58-201ENST00000366481 SPRR2DP22532 72 aa5.53□□□□□ -1.52
TRIM58-201ENST00000366481 KRTAP5-5Q701N2 237 aaPredicted RBP5.49□□□□□ -1.53
TRIM58-201ENST00000366481 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.46□□□□□ -1.54
TRIM58-201ENST00000366481 KRTAP5-9P26371 169 aa5.42□□□□□ -1.54
TRIM58-201ENST00000366481 KRTAP9-6A0A140TA67 174 aa5.38□□□□□ -1.55
TRIM58-201ENST00000366481 KRTAP6-2Q3LI66 62 aa5.35□□□□□ -1.55
TRIM58-201ENST00000366481 KRTAP6-3Q3LI67 103 aa5.18□□□□□ -1.58
TRIM58-201ENST00000366481 KRTAP9-4Q9BYQ2 154 aa5.18□□□□□ -1.58
TRIM58-201ENST00000366481 MT4P47944 62 aa5.14□□□□□ -1.59
TRIM58-201ENST00000366481 NEBP20929 6669 aa5.09□□□□□ -1.59
TRIM58-201ENST00000366481 KRTAP2-2Q9BYT5 123 aa5.02□□□□□ -1.61
TRIM58-201ENST00000366481 MT3P25713 68 aa4.95□□□□□ -1.62
TRIM58-201ENST00000366481 KRTAP4-6Q9BYQ5 205 aa4.95□□□□□ -1.62
TRIM58-201ENST00000366481 HMCN1Q96RW7 5635 aa4.81□□□□□ -1.64
TRIM58-201ENST00000366481 LCE1EQ5T753 118 aa4.68□□□□□ -1.66
TRIM58-201ENST00000366481 LCE1DQ5T752 114 aa4.62□□□□□ -1.67
TRIM58-201ENST00000366481 KRTAP5-4Q6L8H1 288 aa4.59□□□□□ -1.67
TRIM58-201ENST00000366481 KRTAP20-2Q3LI61 65 aa4.56□□□□□ -1.68
TRIM58-201ENST00000366481 MUC19Q7Z5P9 8384 aa4.48□□□□□ -1.69
TRIM58-201ENST00000366481 KRTAP20-1Q3LI63 56 aa4.45□□□□□ -1.7
TRIM58-201ENST00000366481 LCE1BQ5T7P3 118 aa4.42□□□□□ -1.7
TRIM58-201ENST00000366481 LCE4AQ5TA78 99 aa4.42□□□□□ -1.7
TRIM58-201ENST00000366481 MUC5ACP98088 5654 aa4.41□□□□□ -1.7
TRIM58-201ENST00000366481 KRTAP4-11Q9BYQ6 195 aa4.35□□□□□ -1.71
TRIM58-201ENST00000366481 KRTAP5-2Q701N4 177 aa4.3□□□□□ -1.72
TRIM58-201ENST00000366481 KRTAP5-3Q6L8H2 238 aa4.17□□□□□ -1.74
TRIM58-201ENST00000366481 AHNAK2Q8IVF2 5795 aa3.98□□□□□ -1.77
TRIM58-201ENST00000366481 KRTAP5-10Q6L8G5 202 aa3.96□□□□□ -1.78
TRIM58-201ENST00000366481 MUC5BQ9HC84 5762 aaPredicted RBP3.89□□□□□ -1.79
TRIM58-201ENST00000366481 LCE1FQ5T754 118 aa3.88□□□□□ -1.79
TRIM58-201ENST00000366481 KRTAP4-2Q9BYR5 136 aa3.85□□□□□ -1.79
TRIM58-201ENST00000366481 KRTAP5-1Q6L8H4 278 aa3.76□□□□□ -1.81
TRIM58-201ENST00000366481 KRTAP4-4Q9BYR3 166 aa3.71□□□□□ -1.82
TRIM58-201ENST00000366481 LCE1CQ5T751 118 aa3.7□□□□□ -1.82
TRIM58-201ENST00000366481 GPR98Q8WXG9 6306 aa3.65□□□□□ -1.82
TRIM58-201ENST00000366481 KRTAP4-12Q9BQ66 201 aa3.63□□□□□ -1.83
TRIM58-201ENST00000366481 KRTAP5-8O75690 187 aa3.61□□□□□ -1.83
TRIM58-201ENST00000366481 KRTAP21-2Q3LI59 83 aa3.61□□□□□ -1.83
TRIM58-201ENST00000366481 KRTAP21-1Q3LI58 79 aa3.42□□□□□ -1.86
TRIM58-201ENST00000366481 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.38□□□□□ -1.87
TRIM58-201ENST00000366481 KRTAP9-9Q9BYP9 154 aa3.28□□□□□ -1.88
TRIM58-201ENST00000366481 KRTAP5-7Q6L8G8 165 aa3.2□□□□□ -1.9
TRIM58-201ENST00000366481 KRTAP5-11Q6L8G4 156 aa3.15□□□□□ -1.91
TRIM58-201ENST00000366481 AHNAKQ09666 5890 aaKnown RBP3□□□□□ -1.93
TRIM58-201ENST00000366481 PHGR1C9JFL3 82 aa2.78□□□□□ -1.96
TRIM58-201ENST00000366481 MUC16Q8WXI7 14507 aa1.89□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 11.1 ms