RNA–Protein interactions for RNA: ENST00000361724.3

PCDH11X-203, Transcript of protocadherin 11 X-linked, humanhuman

TSL 1 (best)

Gene PCDH11X, Length 4,603 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-203ENST00000361724 PKD1L1Q8TDX9 2849 aa1.34□□□□□ -2.19
PCDH11X-203ENST00000361724 VWFP04275 2813 aa1.34□□□□□ -2.19
PCDH11X-203ENST00000361724 MT2AP02795 61 aa1.34□□□□□ -2.19
PCDH11X-203ENST00000361724 STARD9Q9P2P6 4700 aa1.33□□□□□ -2.2
PCDH11X-203ENST00000361724 KRTAP10-5P60370 271 aa1.33□□□□□ -2.2
PCDH11X-203ENST00000361724 TGP01266 2768 aa1.33□□□□□ -2.2
PCDH11X-203ENST00000361724 MT1FP04733 61 aa1.32□□□□□ -2.2
PCDH11X-203ENST00000361724 KRTAP10-12P60413 245 aa1.32□□□□□ -2.2
PCDH11X-203ENST00000361724 COL7A1Q02388 2944 aa1.31□□□□□ -2.2
PCDH11X-203ENST00000361724 APOBP04114 4563 aaKnown RBP1.31□□□□□ -2.2
PCDH11X-203ENST00000361724 MUC5BQ9HC84 5762 aaPredicted RBP1.31□□□□□ -2.2
PCDH11X-203ENST00000361724 FAT1Q14517 4588 aa1.29□□□□□ -2.2
PCDH11X-203ENST00000361724 SRRM2Q9UQ35 2752 aaKnown RBP1.29□□□□□ -2.2
PCDH11X-203ENST00000361724 KRTAP5-1Q6L8H4 278 aa1.28□□□□□ -2.2
PCDH11X-203ENST00000361724 FAT4Q6V0I7 4981 aa1.28□□□□□ -2.2
PCDH11X-203ENST00000361724 EPPK1P58107 5090 aaKnown RBP1.27□□□□□ -2.21
PCDH11X-203ENST00000361724 ABCA13Q86UQ4 5058 aa1.27□□□□□ -2.21
PCDH11X-203ENST00000361724 MT1GP13640 62 aa1.26□□□□□ -2.21
PCDH11X-203ENST00000361724 AHNAKQ09666 5890 aaKnown RBP1.26□□□□□ -2.21
PCDH11X-203ENST00000361724 HYDINQ4G0P3 5121 aa1.25□□□□□ -2.21
PCDH11X-203ENST00000361724 MT4P47944 62 aa1.24□□□□□ -2.21
PCDH11X-203ENST00000361724 SYNE1Q8NF91 8797 aaKnown RBP1.23□□□□□ -2.21
PCDH11X-203ENST00000361724 SPRR2GQ9BYE4 73 aa1.22□□□□□ -2.21
PCDH11X-203ENST00000361724 MEGF8Q7Z7M0 2845 aa1.22□□□□□ -2.21
PCDH11X-203ENST00000361724 DYNC1H1Q14204 4646 aaKnown RBP1.22□□□□□ -2.21
PCDH11X-203ENST00000361724 MUC19Q7Z5P9 8384 aa1.22□□□□□ -2.21
PCDH11X-203ENST00000361724 KRTAP19-8Q3LI54 63 aa1.22□□□□□ -2.21
PCDH11X-203ENST00000361724 AHNAK2Q8IVF2 5795 aa1.21□□□□□ -2.22
PCDH11X-203ENST00000361724 KRTAP12-3P60328 96 aa1.2□□□□□ -2.22
PCDH11X-203ENST00000361724 FLGP20930 4061 aaPredicted RBP1.19□□□□□ -2.22
PCDH11X-203ENST00000361724 KRTAP5-5Q701N2 237 aaPredicted RBP1.19□□□□□ -2.22
PCDH11X-203ENST00000361724 LCE3AQ5TA76 89 aa1.18□□□□□ -2.22
PCDH11X-203ENST00000361724 MT1BP07438 61 aa1.16□□□□□ -2.22
PCDH11X-203ENST00000361724 MUC17Q685J3 4493 aa1.16□□□□□ -2.22
PCDH11X-203ENST00000361724 KRTAP19-3Q7Z4W3 81 aa1.16□□□□□ -2.22
PCDH11X-203ENST00000361724 HMCN2Q8NDA2 5059 aa1.15□□□□□ -2.22
PCDH11X-203ENST00000361724 FSIP2Q5CZC0 6907 aa1.15□□□□□ -2.23
PCDH11X-203ENST00000361724 LCE1EQ5T753 118 aa1.15□□□□□ -2.23
PCDH11X-203ENST00000361724 DSTQ03001 7570 aaKnown RBP1.13□□□□□ -2.23
PCDH11X-203ENST00000361724 LCE3EQ5T5B0 92 aa1.13□□□□□ -2.23
PCDH11X-203ENST00000361724 SSPOA2VEC9 5147 aa1.12□□□□□ -2.23
PCDH11X-203ENST00000361724 LCE3CQ5T5A8 94 aa1.12□□□□□ -2.23
PCDH11X-203ENST00000361724 KRTAP4-1Q9BYQ7 146 aa1.12□□□□□ -2.23
PCDH11X-203ENST00000361724 KRTAP5-7Q6L8G8 165 aa1.11□□□□□ -2.23
PCDH11X-203ENST00000361724 MACF1Q9UPN3 7388 aaKnown RBP1.1□□□□□ -2.23
PCDH11X-203ENST00000361724 LPAP08519 4548 aa1.09□□□□□ -2.23
PCDH11X-203ENST00000361724 KRTAP19-2Q3LHN2 52 aa1.09□□□□□ -2.24
PCDH11X-203ENST00000361724 FCGBPQ9Y6R7 5405 aaPredicted RBP1.08□□□□□ -2.24
PCDH11X-203ENST00000361724 MDN1Q9NU22 5596 aa1.06□□□□□ -2.24
PCDH11X-203ENST00000361724 UBR4Q5T4S7 5183 aa1.06□□□□□ -2.24
PCDH11X-203ENST00000361724 MT1MQ8N339 61 aa1.06□□□□□ -2.24
PCDH11X-203ENST00000361724 LCE3DQ9BYE3 92 aa1.05□□□□□ -2.24
PCDH11X-203ENST00000361724 KRTAP9-6A8MVA2 160 aa1.04□□□□□ -2.24
PCDH11X-203ENST00000361724 LCE1CQ5T751 118 aa1.03□□□□□ -2.24
PCDH11X-203ENST00000361724 LCE1FQ5T754 118 aa1.03□□□□□ -2.24
PCDH11X-203ENST00000361724 KMT2DO14686 5537 aa1.03□□□□□ -2.24
PCDH11X-203ENST00000361724 RNF213Q63HN8 5207 aa1.02□□□□□ -2.25
PCDH11X-203ENST00000361724 USH2AO75445 5202 aa1.01□□□□□ -2.25
PCDH11X-203ENST00000361724 KRTAP19-5Q3LI72 72 aa0.98□□□□□ -2.25
PCDH11X-203ENST00000361724 LCE1BQ5T7P3 118 aa0.98□□□□□ -2.25
PCDH11X-203ENST00000361724 MT1LQ93083 61 aa0.98□□□□□ -2.25
PCDH11X-203ENST00000361724 MT1AP04731 61 aa0.96□□□□□ -2.26
PCDH11X-203ENST00000361724 KRTAP4-3Q9BYR4 195 aa0.96□□□□□ -2.26
PCDH11X-203ENST00000361724 PRM1P04553 51 aa0.96□□□□□ -2.26
PCDH11X-203ENST00000361724 MT1EP04732 61 aa0.96□□□□□ -2.26
PCDH11X-203ENST00000361724 MUC5ACP98088 5654 aa0.94□□□□□ -2.26
PCDH11X-203ENST00000361724 KRTAP20-2Q3LI61 65 aa0.94□□□□□ -2.26
PCDH11X-203ENST00000361724 MT1XP80297 61 aa0.93□□□□□ -2.26
PCDH11X-203ENST00000361724 KRTAP5-10Q6L8G5 202 aa0.93□□□□□ -2.26
PCDH11X-203ENST00000361724 PHGR1C9JFL3 82 aa0.9□□□□□ -2.26
PCDH11X-203ENST00000361724 MUC2Q02817 5179 aa0.86□□□□□ -2.27
PCDH11X-203ENST00000361724 KRTAP21-1Q3LI58 79 aa0.85□□□□□ -2.27
PCDH11X-203ENST00000361724 MUC12Q9UKN1 5478 aa0.82□□□□□ -2.28
PCDH11X-203ENST00000361724 KRTAP6-2Q3LI66 62 aa0.8□□□□□ -2.28
PCDH11X-203ENST00000361724 KRTAP19-7Q3SYF9 63 aa0.78□□□□□ -2.28
PCDH11X-203ENST00000361724 KRTAP21-2Q3LI59 83 aa0.72□□□□□ -2.29
PCDH11X-203ENST00000361724 KRTAP6-1Q3LI64 71 aa0.68□□□□□ -2.3
PCDH11X-203ENST00000361724 MUC16Q8WXI7 14507 aa0.51□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 91.4 ms