RNA–Protein interactions for RNA: ENST00000361675.6

CALD1-201, Transcript of caldesmon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALD1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-201ENST00000361675 KRTAP4-8A0A0G2JLE6 195 aa3.14□□□□□ -1.91
CALD1-201ENST00000361675 KRTAP4-8Q9BYQ9 185 aa3.14□□□□□ -1.91
CALD1-201ENST00000361675 KRTAP6-3Q3LI67 103 aa3.14□□□□□ -1.91
CALD1-201ENST00000361675 MUC19Q7Z5P9 8384 aa3.13□□□□□ -1.91
CALD1-201ENST00000361675 KRTAP4-7Q9BYR0 210 aa3.13□□□□□ -1.91
CALD1-201ENST00000361675 KRTAP9-6A8MVA2 160 aa3.13□□□□□ -1.91
CALD1-201ENST00000361675 KRTAP9-4Q9BYQ2 154 aa3.12□□□□□ -1.91
CALD1-201ENST00000361675 KRTAP2-3P0C7H8 128 aa3.05□□□□□ -1.92
CALD1-201ENST00000361675 KRTAP2-4Q9BYR9 128 aa3.05□□□□□ -1.92
CALD1-201ENST00000361675 KRTAP2-1Q9BYU5 128 aa3.05□□□□□ -1.92
CALD1-201ENST00000361675 LCE3DQ9BYE3 92 aa3.02□□□□□ -1.93
CALD1-201ENST00000361675 KRTAP9-6A0A140TA67 174 aa3.01□□□□□ -1.93
CALD1-201ENST00000361675 FCGBPQ9Y6R7 5405 aaPredicted RBP3□□□□□ -1.93
CALD1-201ENST00000361675 KRTAP19-7Q3SYF9 63 aa2.99□□□□□ -1.93
CALD1-201ENST00000361675 MUC12Q9UKN1 5478 aa2.97□□□□□ -1.93
CALD1-201ENST00000361675 LCE4AQ5TA78 99 aa2.96□□□□□ -1.94
CALD1-201ENST00000361675 KRTAP19-4Q3LI73 84 aa2.95□□□□□ -1.94
CALD1-201ENST00000361675 DSTQ03001 7570 aaKnown RBP2.92□□□□□ -1.94
CALD1-201ENST00000361675 PRM1P04553 51 aa2.91□□□□□ -1.94
CALD1-201ENST00000361675 KRTAP19-6Q3LI70 58 aa2.91□□□□□ -1.94
CALD1-201ENST00000361675 MT3P25713 68 aa2.89□□□□□ -1.95
CALD1-201ENST00000361675 LOC100996750A0A140TA64 210 aa2.88□□□□□ -1.95
CALD1-201ENST00000361675 MT1EP04732 61 aa2.88□□□□□ -1.95
CALD1-201ENST00000361675 KRTAP4-9Q9BYQ8 210 aa2.87□□□□□ -1.95
CALD1-201ENST00000361675 LCE3BQ5TA77 95 aa2.86□□□□□ -1.95
CALD1-201ENST00000361675 MT1LQ93083 61 aa2.86□□□□□ -1.95
CALD1-201ENST00000361675 MACF1Q9UPN3 7388 aaKnown RBP2.84□□□□□ -1.95
CALD1-201ENST00000361675 KRTAP4-3Q9BYR4 195 aa2.83□□□□□ -1.96
CALD1-201ENST00000361675 MT1GP13640 62 aa2.83□□□□□ -1.96
CALD1-201ENST00000361675 KRTAP9-9Q9BYP9 154 aa2.83□□□□□ -1.96
CALD1-201ENST00000361675 KRTAP9-7A8MTY7 169 aa2.82□□□□□ -1.96
CALD1-201ENST00000361675 SYNE2Q8WXH0 6885 aaKnown RBP2.8□□□□□ -1.96
CALD1-201ENST00000361675 MDN1Q9NU22 5596 aa2.77□□□□□ -1.97
CALD1-201ENST00000361675 KRTAP9-2Q9BYQ4 174 aa2.75□□□□□ -1.97
CALD1-201ENST00000361675 MT1MQ8N339 61 aa2.69□□□□□ -1.98
CALD1-201ENST00000361675 KRTAP19-3Q7Z4W3 81 aa2.68□□□□□ -1.98
CALD1-201ENST00000361675 SPRR2FQ96RM1 72 aa2.67□□□□□ -1.98
CALD1-201ENST00000361675 KRTAP4-6Q9BYQ5 205 aa2.65□□□□□ -1.99
CALD1-201ENST00000361675 KRTAP6-2Q3LI66 62 aa2.55□□□□□ -2
CALD1-201ENST00000361675 KRTAP5-5Q701N2 237 aaPredicted RBP2.52□□□□□ -2.01
CALD1-201ENST00000361675 KRTAP5-9P26371 169 aa2.49□□□□□ -2.01
CALD1-201ENST00000361675 KRTAP6-1Q3LI64 71 aa2.47□□□□□ -2.01
CALD1-201ENST00000361675 SPRR2EP22531 72 aa2.44□□□□□ -2.02
CALD1-201ENST00000361675 SPRR2BP35325 72 aa2.44□□□□□ -2.02
CALD1-201ENST00000361675 SPRR2AP35326 72 aa2.44□□□□□ -2.02
CALD1-201ENST00000361675 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.44□□□□□ -2.02
CALD1-201ENST00000361675 MT1AP04731 61 aa2.39□□□□□ -2.03
CALD1-201ENST00000361675 SPRR2DP22532 72 aa2.33□□□□□ -2.04
CALD1-201ENST00000361675 NEBP20929 6669 aa2.25□□□□□ -2.05
CALD1-201ENST00000361675 LCE1CQ5T751 118 aa2.21□□□□□ -2.06
CALD1-201ENST00000361675 LCE1BQ5T7P3 118 aa2.21□□□□□ -2.06
CALD1-201ENST00000361675 KRTAP4-11Q9BYQ6 195 aa2.21□□□□□ -2.06
CALD1-201ENST00000361675 KRTAP5-3Q6L8H2 238 aa2.17□□□□□ -2.06
CALD1-201ENST00000361675 HMCN1Q96RW7 5635 aa2.15□□□□□ -2.07
CALD1-201ENST00000361675 KRTAP5-4Q6L8H1 288 aa2.14□□□□□ -2.07
CALD1-201ENST00000361675 MT4P47944 62 aa2.12□□□□□ -2.07
CALD1-201ENST00000361675 KRTAP20-1Q3LI63 56 aa2.1□□□□□ -2.07
CALD1-201ENST00000361675 KRTAP20-2Q3LI61 65 aa2.03□□□□□ -2.08
CALD1-201ENST00000361675 KRTAP4-12Q9BQ66 201 aa2.03□□□□□ -2.08
CALD1-201ENST00000361675 KRTAP4-2Q9BYR5 136 aa1.98□□□□□ -2.09
CALD1-201ENST00000361675 KRTAP5-2Q701N4 177 aa1.98□□□□□ -2.09
CALD1-201ENST00000361675 MUC5ACP98088 5654 aa1.9□□□□□ -2.11
CALD1-201ENST00000361675 GPR98Q8WXG9 6306 aa1.86□□□□□ -2.11
CALD1-201ENST00000361675 KRTAP5-1Q6L8H4 278 aa1.74□□□□□ -2.13
CALD1-201ENST00000361675 KRTAP5-10Q6L8G5 202 aa1.71□□□□□ -2.14
CALD1-201ENST00000361675 KRTAP4-4Q9BYR3 166 aa1.71□□□□□ -2.14
CALD1-201ENST00000361675 KRTAP5-7Q6L8G8 165 aa1.7□□□□□ -2.14
CALD1-201ENST00000361675 AHNAK2Q8IVF2 5795 aa1.69□□□□□ -2.14
CALD1-201ENST00000361675 MUC5BQ9HC84 5762 aaPredicted RBP1.68□□□□□ -2.14
CALD1-201ENST00000361675 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.67□□□□□ -2.14
CALD1-201ENST00000361675 KRTAP5-8O75690 187 aa1.65□□□□□ -2.15
CALD1-201ENST00000361675 KRTAP21-1Q3LI58 79 aa1.6□□□□□ -2.15
CALD1-201ENST00000361675 KRTAP21-2Q3LI59 83 aa1.59□□□□□ -2.15
CALD1-201ENST00000361675 AHNAKQ09666 5890 aaKnown RBP1.51□□□□□ -2.17
CALD1-201ENST00000361675 KRTAP5-11Q6L8G4 156 aa1.42□□□□□ -2.18
CALD1-201ENST00000361675 PHGR1C9JFL3 82 aa1.26□□□□□ -2.21
CALD1-201ENST00000361675 MUC16Q8WXI7 14507 aa0.9□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 10 ms