RNA–Protein interactions for RNA: ENST00000361339.9

IFT140-201, Transcript of intraflagellar transport 140, humanhuman

TSL 1 (best) BASIC

Gene IFT140, Length 2,987 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-201ENST00000361339 KRTAP2-1Q9BYU5 128 aa5.5□□□□□ -1.53
IFT140-201ENST00000361339 KRTAP4-3Q9BYR4 195 aa5.49□□□□□ -1.53
IFT140-201ENST00000361339 DSTQ03001 7570 aaKnown RBP5.45□□□□□ -1.54
IFT140-201ENST00000361339 LOC100996750A0A140TA64 210 aa5.43□□□□□ -1.54
IFT140-201ENST00000361339 LCE2DQ5TA82 110 aaPredicted RBP5.43□□□□□ -1.54
IFT140-201ENST00000361339 CRCT1Q9UGL9 99 aa5.34□□□□□ -1.55
IFT140-201ENST00000361339 MACF1Q9UPN3 7388 aaKnown RBP5.34□□□□□ -1.55
IFT140-201ENST00000361339 MT1GP13640 62 aa5.31□□□□□ -1.56
IFT140-201ENST00000361339 SYNE2Q8WXH0 6885 aaKnown RBP5.25□□□□□ -1.57
IFT140-201ENST00000361339 MT1MQ8N339 61 aa5.24□□□□□ -1.57
IFT140-201ENST00000361339 KRTAP12-4P60329 112 aa5.23□□□□□ -1.57
IFT140-201ENST00000361339 KRTAP19-3Q7Z4W3 81 aa5.22□□□□□ -1.57
IFT140-201ENST00000361339 SPRR2FQ96RM1 72 aa5.18□□□□□ -1.58
IFT140-201ENST00000361339 MDN1Q9NU22 5596 aa5.18□□□□□ -1.58
IFT140-201ENST00000361339 KRTAP19-4Q3LI73 84 aa5.14□□□□□ -1.59
IFT140-201ENST00000361339 SYNE1Q8NF91 8797 aaKnown RBP5.12□□□□□ -1.59
IFT140-201ENST00000361339 LCE5AQ5TCM9 118 aa5.06□□□□□ -1.6
IFT140-201ENST00000361339 KRTAP4-9Q9BYQ8 210 aa5.01□□□□□ -1.61
IFT140-201ENST00000361339 OBSCNQ5VST9 7968 aa4.97□□□□□ -1.61
IFT140-201ENST00000361339 LCE3BQ5TA77 95 aa4.95□□□□□ -1.62
IFT140-201ENST00000361339 KRTAP9-2Q9BYQ4 174 aa4.92□□□□□ -1.62
IFT140-201ENST00000361339 LCE1AQ5T7P2 110 aa4.81□□□□□ -1.64
IFT140-201ENST00000361339 KRTAP6-1Q3LI64 71 aa4.8□□□□□ -1.64
IFT140-201ENST00000361339 KRTAP9-7A8MTY7 169 aa4.76□□□□□ -1.65
IFT140-201ENST00000361339 SPRR2EP22531 72 aa4.71□□□□□ -1.66
IFT140-201ENST00000361339 KRTAP5-9P26371 169 aa4.71□□□□□ -1.66
IFT140-201ENST00000361339 SPRR2BP35325 72 aa4.71□□□□□ -1.66
IFT140-201ENST00000361339 SPRR2AP35326 72 aa4.71□□□□□ -1.66
IFT140-201ENST00000361339 PRM1P04553 51 aa4.7□□□□□ -1.66
IFT140-201ENST00000361339 MT1AP04731 61 aa4.62□□□□□ -1.67
IFT140-201ENST00000361339 LCE3DQ9BYE3 92 aa4.62□□□□□ -1.67
IFT140-201ENST00000361339 KRTAP5-5Q701N2 237 aaPredicted RBP4.61□□□□□ -1.67
IFT140-201ENST00000361339 LCE3EQ5T5B0 92 aa4.57□□□□□ -1.68
IFT140-201ENST00000361339 KRTAP9-6A0A140TA67 174 aa4.55□□□□□ -1.68
IFT140-201ENST00000361339 SPRR2DP22532 72 aa4.48□□□□□ -1.69
IFT140-201ENST00000361339 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.42□□□□□ -1.7
IFT140-201ENST00000361339 KRTAP6-2Q3LI66 62 aa4.38□□□□□ -1.71
IFT140-201ENST00000361339 KRTAP9-4Q9BYQ2 154 aa4.37□□□□□ -1.71
IFT140-201ENST00000361339 KRTAP6-3Q3LI67 103 aa4.32□□□□□ -1.72
IFT140-201ENST00000361339 NEBP20929 6669 aa4.22□□□□□ -1.73
IFT140-201ENST00000361339 MT3P25713 68 aa4.14□□□□□ -1.75
IFT140-201ENST00000361339 KRTAP4-6Q9BYQ5 205 aa4.1□□□□□ -1.75
IFT140-201ENST00000361339 KRTAP2-2Q9BYT5 123 aa4.08□□□□□ -1.76
IFT140-201ENST00000361339 MT4P47944 62 aa4.07□□□□□ -1.76
IFT140-201ENST00000361339 KRTAP5-4Q6L8H1 288 aa4.05□□□□□ -1.76
IFT140-201ENST00000361339 HMCN1Q96RW7 5635 aa3.96□□□□□ -1.78
IFT140-201ENST00000361339 LCE1EQ5T753 118 aa3.93□□□□□ -1.78
IFT140-201ENST00000361339 KRTAP20-2Q3LI61 65 aa3.88□□□□□ -1.79
IFT140-201ENST00000361339 LCE1DQ5T752 114 aa3.79□□□□□ -1.8
IFT140-201ENST00000361339 KRTAP5-2Q701N4 177 aa3.77□□□□□ -1.81
IFT140-201ENST00000361339 LCE4AQ5TA78 99 aa3.75□□□□□ -1.81
IFT140-201ENST00000361339 MUC5ACP98088 5654 aa3.68□□□□□ -1.82
IFT140-201ENST00000361339 KRTAP5-3Q6L8H2 238 aa3.68□□□□□ -1.82
IFT140-201ENST00000361339 KRTAP20-1Q3LI63 56 aa3.66□□□□□ -1.82
IFT140-201ENST00000361339 KRTAP4-11Q9BYQ6 195 aa3.6□□□□□ -1.83
IFT140-201ENST00000361339 LCE1BQ5T7P3 118 aa3.52□□□□□ -1.85
IFT140-201ENST00000361339 MUC19Q7Z5P9 8384 aa3.41□□□□□ -1.86
IFT140-201ENST00000361339 KRTAP4-2Q9BYR5 136 aa3.31□□□□□ -1.88
IFT140-201ENST00000361339 KRTAP5-10Q6L8G5 202 aa3.29□□□□□ -1.88
IFT140-201ENST00000361339 KRTAP5-1Q6L8H4 278 aa3.28□□□□□ -1.88
IFT140-201ENST00000361339 LCE1CQ5T751 118 aa3.18□□□□□ -1.9
IFT140-201ENST00000361339 AHNAK2Q8IVF2 5795 aa3.15□□□□□ -1.91
IFT140-201ENST00000361339 KRTAP5-8O75690 187 aa3.09□□□□□ -1.91
IFT140-201ENST00000361339 KRTAP21-2Q3LI59 83 aa3.07□□□□□ -1.92
IFT140-201ENST00000361339 MUC5BQ9HC84 5762 aaPredicted RBP3.03□□□□□ -1.92
IFT140-201ENST00000361339 KRTAP4-4Q9BYR3 166 aa2.98□□□□□ -1.93
IFT140-201ENST00000361339 LCE1FQ5T754 118 aa2.97□□□□□ -1.93
IFT140-201ENST00000361339 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.96□□□□□ -1.94
IFT140-201ENST00000361339 KRTAP5-7Q6L8G8 165 aa2.9□□□□□ -1.94
IFT140-201ENST00000361339 KRTAP4-12Q9BQ66 201 aa2.85□□□□□ -1.95
IFT140-201ENST00000361339 GPR98Q8WXG9 6306 aa2.83□□□□□ -1.96
IFT140-201ENST00000361339 KRTAP21-1Q3LI58 79 aa2.79□□□□□ -1.96
IFT140-201ENST00000361339 KRTAP5-11Q6L8G4 156 aa2.74□□□□□ -1.97
IFT140-201ENST00000361339 KRTAP9-9Q9BYP9 154 aa2.62□□□□□ -1.99
IFT140-201ENST00000361339 PHGR1C9JFL3 82 aa2.4□□□□□ -2.02
IFT140-201ENST00000361339 AHNAKQ09666 5890 aaKnown RBP2.3□□□□□ -2.04
IFT140-201ENST00000361339 MUC16Q8WXI7 14507 aa1.6□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 5.7 ms