RNA–Protein interactions for RNA: ENST00000361320.4

LRRTM3-201, Transcript of leucine rich repeat transmembrane neuronal 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRTM3, Length 4,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM3-201ENST00000361320 SPRR2AP35326 72 aa2.69□□□□□ -1.98
LRRTM3-201ENST00000361320 KRTAP5-3Q6L8H2 238 aa2.64□□□□□ -1.99
LRRTM3-201ENST00000361320 KRTAP4-9Q9BYQ8 210 aa2.62□□□□□ -1.99
LRRTM3-201ENST00000361320 LCE1DQ5T752 114 aa2.61□□□□□ -1.99
LRRTM3-201ENST00000361320 SPRR2DP22532 72 aa2.59□□□□□ -1.99
LRRTM3-201ENST00000361320 KRTAP19-6Q3LI70 58 aa2.59□□□□□ -1.99
LRRTM3-201ENST00000361320 SYNE1Q8NF91 8797 aaKnown RBP2.55□□□□□ -2
LRRTM3-201ENST00000361320 LCE3CQ5T5A8 94 aa2.52□□□□□ -2.01
LRRTM3-201ENST00000361320 MT1GP13640 62 aa2.5□□□□□ -2.01
LRRTM3-201ENST00000361320 KRTAP9-7A8MTY7 169 aa2.49□□□□□ -2.01
LRRTM3-201ENST00000361320 SYNE2Q8WXH0 6885 aaKnown RBP2.47□□□□□ -2.01
LRRTM3-201ENST00000361320 KRTAP4-11Q9BYQ6 195 aa2.47□□□□□ -2.01
LRRTM3-201ENST00000361320 KRTAP19-3Q7Z4W3 81 aa2.45□□□□□ -2.02
LRRTM3-201ENST00000361320 KRTAP19-4Q3LI73 84 aa2.45□□□□□ -2.02
LRRTM3-201ENST00000361320 USH2AO75445 5202 aa2.43□□□□□ -2.02
LRRTM3-201ENST00000361320 MT1EP04732 61 aa2.42□□□□□ -2.02
LRRTM3-201ENST00000361320 KRTAP12-4P60329 112 aa2.4□□□□□ -2.03
LRRTM3-201ENST00000361320 MT1LQ93083 61 aa2.4□□□□□ -2.03
LRRTM3-201ENST00000361320 OBSCNQ5VST9 7968 aa2.37□□□□□ -2.03
LRRTM3-201ENST00000361320 KRTAP6-3Q3LI67 103 aa2.36□□□□□ -2.03
LRRTM3-201ENST00000361320 KMT2DO14686 5537 aa2.36□□□□□ -2.03
LRRTM3-201ENST00000361320 MT1MQ8N339 61 aa2.34□□□□□ -2.03
LRRTM3-201ENST00000361320 MT4P47944 62 aa2.33□□□□□ -2.04
LRRTM3-201ENST00000361320 DSTQ03001 7570 aaKnown RBP2.32□□□□□ -2.04
LRRTM3-201ENST00000361320 KRTAP20-1Q3LI63 56 aa2.32□□□□□ -2.04
LRRTM3-201ENST00000361320 KRTAP19-7Q3SYF9 63 aa2.32□□□□□ -2.04
LRRTM3-201ENST00000361320 MACF1Q9UPN3 7388 aaKnown RBP2.32□□□□□ -2.04
LRRTM3-201ENST00000361320 KRTAP4-3Q9BYR4 195 aa2.32□□□□□ -2.04
LRRTM3-201ENST00000361320 FCGBPQ9Y6R7 5405 aaPredicted RBP2.31□□□□□ -2.04
LRRTM3-201ENST00000361320 SSPOA2VEC9 5147 aa2.28□□□□□ -2.04
LRRTM3-201ENST00000361320 INE1O15225 51 aa2.28□□□□□ -2.05
LRRTM3-201ENST00000361320 LCE1AQ5T7P2 110 aa2.25□□□□□ -2.05
LRRTM3-201ENST00000361320 KRTAP2-3P0C7H8 128 aa2.24□□□□□ -2.05
LRRTM3-201ENST00000361320 KRTAP2-4Q9BYR9 128 aa2.24□□□□□ -2.05
LRRTM3-201ENST00000361320 LCE4AQ5TA78 99 aa2.24□□□□□ -2.05
LRRTM3-201ENST00000361320 MUC12Q9UKN1 5478 aa2.19□□□□□ -2.06
LRRTM3-201ENST00000361320 KRTAP2-2Q9BYT5 123 aa2.19□□□□□ -2.06
LRRTM3-201ENST00000361320 KRTAP2-1Q9BYU5 128 aa2.19□□□□□ -2.06
LRRTM3-201ENST00000361320 LCE5AQ5TCM9 118 aa2.17□□□□□ -2.06
LRRTM3-201ENST00000361320 MDN1Q9NU22 5596 aa2.14□□□□□ -2.07
LRRTM3-201ENST00000361320 MT3P25713 68 aa2.13□□□□□ -2.07
LRRTM3-201ENST00000361320 SPRR5A0A1B0GTR4 108 aa2.13□□□□□ -2.07
LRRTM3-201ENST00000361320 NEBP20929 6669 aa2.12□□□□□ -2.07
LRRTM3-201ENST00000361320 LCE3DQ9BYE3 92 aa2.12□□□□□ -2.07
LRRTM3-201ENST00000361320 KRTAP5-9P26371 169 aa2.1□□□□□ -2.07
LRRTM3-201ENST00000361320 MT1AP04731 61 aa2.1□□□□□ -2.07
LRRTM3-201ENST00000361320 LCE3EQ5T5B0 92 aa2.06□□□□□ -2.08
LRRTM3-201ENST00000361320 LCE1BQ5T7P3 118 aa2.03□□□□□ -2.08
LRRTM3-201ENST00000361320 KRTAP6-1Q3LI64 71 aa2.03□□□□□ -2.08
LRRTM3-201ENST00000361320 KRTAP9-6A8MVA2 160 aa2.02□□□□□ -2.09
LRRTM3-201ENST00000361320 KRTAP6-2Q3LI66 62 aa1.99□□□□□ -2.09
LRRTM3-201ENST00000361320 GPR98Q8WXG9 6306 aa1.99□□□□□ -2.09
LRRTM3-201ENST00000361320 MUC19Q7Z5P9 8384 aa1.94□□□□□ -2.1
LRRTM3-201ENST00000361320 LCE1FQ5T754 118 aa1.92□□□□□ -2.1
LRRTM3-201ENST00000361320 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.92□□□□□ -2.1
LRRTM3-201ENST00000361320 LCE1EQ5T753 118 aa1.87□□□□□ -2.11
LRRTM3-201ENST00000361320 KRTAP20-2Q3LI61 65 aa1.83□□□□□ -2.12
LRRTM3-201ENST00000361320 PRM1P04553 51 aa1.8□□□□□ -2.12
LRRTM3-201ENST00000361320 KRTAP5-11Q6L8G4 156 aa1.71□□□□□ -2.14
LRRTM3-201ENST00000361320 KRTAP5-4Q6L8H1 288 aa1.71□□□□□ -2.14
LRRTM3-201ENST00000361320 LCE1CQ5T751 118 aa1.69□□□□□ -2.14
LRRTM3-201ENST00000361320 KRTAP5-5Q701N2 237 aaPredicted RBP1.66□□□□□ -2.14
LRRTM3-201ENST00000361320 MUC5ACP98088 5654 aa1.65□□□□□ -2.14
LRRTM3-201ENST00000361320 HMCN1Q96RW7 5635 aa1.63□□□□□ -2.15
LRRTM3-201ENST00000361320 KRTAP5-1Q6L8H4 278 aa1.62□□□□□ -2.15
LRRTM3-201ENST00000361320 KRTAP4-4Q9BYR3 166 aa1.61□□□□□ -2.15
LRRTM3-201ENST00000361320 AHNAK2Q8IVF2 5795 aa1.57□□□□□ -2.16
LRRTM3-201ENST00000361320 KRTAP5-8O75690 187 aa1.49□□□□□ -2.17
LRRTM3-201ENST00000361320 KRTAP5-2Q701N4 177 aa1.49□□□□□ -2.17
LRRTM3-201ENST00000361320 MUC5BQ9HC84 5762 aaPredicted RBP1.45□□□□□ -2.18
LRRTM3-201ENST00000361320 AHNAKQ09666 5890 aaKnown RBP1.34□□□□□ -2.19
LRRTM3-201ENST00000361320 KRTAP5-10Q6L8G5 202 aa1.34□□□□□ -2.19
LRRTM3-201ENST00000361320 KRTAP5-7Q6L8G8 165 aa1.26□□□□□ -2.21
LRRTM3-201ENST00000361320 PHGR1C9JFL3 82 aa1.2□□□□□ -2.22
LRRTM3-201ENST00000361320 KRTAP21-2Q3LI59 83 aa1.12□□□□□ -2.23
LRRTM3-201ENST00000361320 KRTAP21-1Q3LI58 79 aa0.82□□□□□ -2.28
LRRTM3-201ENST00000361320 MUC16Q8WXI7 14507 aa0.74□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 71.8 ms