RNA–Protein interactions for RNA: ENST00000359943.7

FAM3C-201, Transcript of family with sequence similarity 3 member C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3C, Length 2,508 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3C-201ENST00000359943 KRTAP9-6A0A140TA67 174 aa7.02□□□□□ -1.29
FAM3C-201ENST00000359943 DSTQ03001 7570 aaKnown RBP6.91□□□□□ -1.3
FAM3C-201ENST00000359943 KRTAP4-3Q9BYR4 195 aa6.91□□□□□ -1.3
FAM3C-201ENST00000359943 CRCT1Q9UGL9 99 aa6.89□□□□□ -1.31
FAM3C-201ENST00000359943 LOC100996750A0A140TA64 210 aa6.85□□□□□ -1.31
FAM3C-201ENST00000359943 KRTAP2-3P0C7H8 128 aa6.78□□□□□ -1.32
FAM3C-201ENST00000359943 KRTAP2-4Q9BYR9 128 aa6.78□□□□□ -1.32
FAM3C-201ENST00000359943 KRTAP2-1Q9BYU5 128 aa6.78□□□□□ -1.32
FAM3C-201ENST00000359943 MT1GP13640 62 aa6.73□□□□□ -1.33
FAM3C-201ENST00000359943 MACF1Q9UPN3 7388 aaKnown RBP6.69□□□□□ -1.34
FAM3C-201ENST00000359943 KRTAP19-4Q3LI73 84 aa6.64□□□□□ -1.35
FAM3C-201ENST00000359943 MT1MQ8N339 61 aa6.64□□□□□ -1.35
FAM3C-201ENST00000359943 KRTAP19-3Q7Z4W3 81 aa6.63□□□□□ -1.35
FAM3C-201ENST00000359943 SYNE2Q8WXH0 6885 aaKnown RBP6.58□□□□□ -1.36
FAM3C-201ENST00000359943 MDN1Q9NU22 5596 aa6.58□□□□□ -1.36
FAM3C-201ENST00000359943 SPRR2FQ96RM1 72 aa6.56□□□□□ -1.36
FAM3C-201ENST00000359943 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.42□□□□□ -1.38
FAM3C-201ENST00000359943 LCE5AQ5TCM9 118 aa6.42□□□□□ -1.38
FAM3C-201ENST00000359943 SYNE1Q8NF91 8797 aaKnown RBP6.35□□□□□ -1.39
FAM3C-201ENST00000359943 KRTAP9-7A8MTY7 169 aa6.29□□□□□ -1.4
FAM3C-201ENST00000359943 KRTAP5-9P26371 169 aa6.27□□□□□ -1.41
FAM3C-201ENST00000359943 LCE3BQ5TA77 95 aa6.21□□□□□ -1.42
FAM3C-201ENST00000359943 KRTAP6-3Q3LI67 103 aa6.19□□□□□ -1.42
FAM3C-201ENST00000359943 KRTAP4-9Q9BYQ8 210 aa6.16□□□□□ -1.42
FAM3C-201ENST00000359943 KRTAP12-4P60329 112 aa6.09□□□□□ -1.43
FAM3C-201ENST00000359943 KRTAP6-1Q3LI64 71 aa6.08□□□□□ -1.44
FAM3C-201ENST00000359943 LCE1AQ5T7P2 110 aa6.07□□□□□ -1.44
FAM3C-201ENST00000359943 OBSCNQ5VST9 7968 aa5.99□□□□□ -1.45
FAM3C-201ENST00000359943 SPRR2EP22531 72 aa5.95□□□□□ -1.46
FAM3C-201ENST00000359943 SPRR2BP35325 72 aa5.95□□□□□ -1.46
FAM3C-201ENST00000359943 SPRR2AP35326 72 aa5.95□□□□□ -1.46
FAM3C-201ENST00000359943 MT1AP04731 61 aa5.87□□□□□ -1.47
FAM3C-201ENST00000359943 KRTAP5-5Q701N2 237 aaPredicted RBP5.83□□□□□ -1.48
FAM3C-201ENST00000359943 NEBP20929 6669 aa5.73□□□□□ -1.49
FAM3C-201ENST00000359943 LCE3DQ9BYE3 92 aa5.7□□□□□ -1.5
FAM3C-201ENST00000359943 SPRR2DP22532 72 aa5.7□□□□□ -1.5
FAM3C-201ENST00000359943 KRTAP20-1Q3LI63 56 aa5.59□□□□□ -1.51
FAM3C-201ENST00000359943 LCE3EQ5T5B0 92 aa5.58□□□□□ -1.52
FAM3C-201ENST00000359943 KRTAP9-4Q9BYQ2 154 aa5.55□□□□□ -1.52
FAM3C-201ENST00000359943 KRTAP6-2Q3LI66 62 aa5.48□□□□□ -1.53
FAM3C-201ENST00000359943 PRM1P04553 51 aa5.43□□□□□ -1.54
FAM3C-201ENST00000359943 KRTAP2-2Q9BYT5 123 aa5.35□□□□□ -1.55
FAM3C-201ENST00000359943 MT3P25713 68 aa5.28□□□□□ -1.56
FAM3C-201ENST00000359943 KRTAP5-4Q6L8H1 288 aa5.24□□□□□ -1.57
FAM3C-201ENST00000359943 LCE4AQ5TA78 99 aa5.18□□□□□ -1.58
FAM3C-201ENST00000359943 KRTAP4-6Q9BYQ5 205 aa5.17□□□□□ -1.58
FAM3C-201ENST00000359943 MT4P47944 62 aa5.14□□□□□ -1.59
FAM3C-201ENST00000359943 HMCN1Q96RW7 5635 aa5.01□□□□□ -1.61
FAM3C-201ENST00000359943 KRTAP20-2Q3LI61 65 aa4.9□□□□□ -1.63
FAM3C-201ENST00000359943 LCE1DQ5T752 114 aa4.84□□□□□ -1.63
FAM3C-201ENST00000359943 KRTAP5-2Q701N4 177 aa4.77□□□□□ -1.65
FAM3C-201ENST00000359943 KRTAP5-3Q6L8H2 238 aa4.68□□□□□ -1.66
FAM3C-201ENST00000359943 MUC5ACP98088 5654 aa4.66□□□□□ -1.66
FAM3C-201ENST00000359943 GPR98Q8WXG9 6306 aa4.54□□□□□ -1.68
FAM3C-201ENST00000359943 LCE1BQ5T7P3 118 aa4.46□□□□□ -1.7
FAM3C-201ENST00000359943 AHNAK2Q8IVF2 5795 aa4.4□□□□□ -1.7
FAM3C-201ENST00000359943 KRTAP5-10Q6L8G5 202 aa4.4□□□□□ -1.71
FAM3C-201ENST00000359943 KRTAP5-7Q6L8G8 165 aa4.33□□□□□ -1.72
FAM3C-201ENST00000359943 LCE1EQ5T753 118 aa4.32□□□□□ -1.72
FAM3C-201ENST00000359943 KRTAP4-11Q9BYQ6 195 aa4.19□□□□□ -1.74
FAM3C-201ENST00000359943 KRTAP4-2Q9BYR5 136 aa4.17□□□□□ -1.74
FAM3C-201ENST00000359943 KRTAP5-1Q6L8H4 278 aa4.14□□□□□ -1.75
FAM3C-201ENST00000359943 LCE1CQ5T751 118 aa4.06□□□□□ -1.76
FAM3C-201ENST00000359943 KRTAP5-8O75690 187 aa4.05□□□□□ -1.76
FAM3C-201ENST00000359943 KRTAP21-2Q3LI59 83 aa3.88□□□□□ -1.79
FAM3C-201ENST00000359943 MUC5BQ9HC84 5762 aaPredicted RBP3.85□□□□□ -1.79
FAM3C-201ENST00000359943 AHNAKQ09666 5890 aaKnown RBP3.78□□□□□ -1.8
FAM3C-201ENST00000359943 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.76□□□□□ -1.81
FAM3C-201ENST00000359943 KRTAP4-4Q9BYR3 166 aa3.75□□□□□ -1.81
FAM3C-201ENST00000359943 MUC19Q7Z5P9 8384 aa3.73□□□□□ -1.81
FAM3C-201ENST00000359943 KRTAP9-9Q9BYP9 154 aa3.68□□□□□ -1.82
FAM3C-201ENST00000359943 KRTAP4-12Q9BQ66 201 aa3.58□□□□□ -1.84
FAM3C-201ENST00000359943 KRTAP5-11Q6L8G4 156 aa3.5□□□□□ -1.85
FAM3C-201ENST00000359943 KRTAP21-1Q3LI58 79 aa3.45□□□□□ -1.86
FAM3C-201ENST00000359943 LCE1FQ5T754 118 aa3.24□□□□□ -1.89
FAM3C-201ENST00000359943 PHGR1C9JFL3 82 aa3.05□□□□□ -1.92
FAM3C-201ENST00000359943 MUC16Q8WXI7 14507 aa2□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 73.7 ms