RNA–Protein interactions for RNA: ENST00000358389.7

CNOT3-202, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-202ENST00000358389 SPRR2AP35326 72 aa3.78□□□□□ -1.8
CNOT3-202ENST00000358389 LCE2BO14633 110 aa3.78□□□□□ -1.8
CNOT3-202ENST00000358389 KRTAP19-7Q3SYF9 63 aa3.78□□□□□ -1.8
CNOT3-202ENST00000358389 DSTQ03001 7570 aaKnown RBP3.77□□□□□ -1.81
CNOT3-202ENST00000358389 LCE3BQ5TA77 95 aa3.76□□□□□ -1.81
CNOT3-202ENST00000358389 KRTAP19-4Q3LI73 84 aa3.76□□□□□ -1.81
CNOT3-202ENST00000358389 FCGBPQ9Y6R7 5405 aaPredicted RBP3.74□□□□□ -1.81
CNOT3-202ENST00000358389 LOC100996750A0A140TA64 210 aa3.74□□□□□ -1.81
CNOT3-202ENST00000358389 MT1LQ93083 61 aa3.74□□□□□ -1.81
CNOT3-202ENST00000358389 KRTAP4-3Q9BYR4 195 aa3.68□□□□□ -1.82
CNOT3-202ENST00000358389 MT1EP04732 61 aa3.67□□□□□ -1.82
CNOT3-202ENST00000358389 SPRR2DP22532 72 aa3.65□□□□□ -1.83
CNOT3-202ENST00000358389 KRTAP9-2Q9BYQ4 174 aa3.65□□□□□ -1.83
CNOT3-202ENST00000358389 LCE2AQ5TA79 106 aaPredicted RBP3.64□□□□□ -1.83
CNOT3-202ENST00000358389 KRTAP4-9Q9BYQ8 210 aa3.56□□□□□ -1.84
CNOT3-202ENST00000358389 KRTAP19-6Q3LI70 58 aa3.55□□□□□ -1.84
CNOT3-202ENST00000358389 SSPOA2VEC9 5147 aa3.55□□□□□ -1.84
CNOT3-202ENST00000358389 SYNE2Q8WXH0 6885 aaKnown RBP3.54□□□□□ -1.84
CNOT3-202ENST00000358389 KRTAP19-3Q7Z4W3 81 aa3.53□□□□□ -1.84
CNOT3-202ENST00000358389 MUC12Q9UKN1 5478 aa3.5□□□□□ -1.85
CNOT3-202ENST00000358389 LCE2DQ5TA82 110 aaPredicted RBP3.49□□□□□ -1.85
CNOT3-202ENST00000358389 LCE3DQ9BYE3 92 aa3.48□□□□□ -1.85
CNOT3-202ENST00000358389 PRM1P04553 51 aa3.46□□□□□ -1.86
CNOT3-202ENST00000358389 KRTAP9-6A0A140TA67 174 aa3.44□□□□□ -1.86
CNOT3-202ENST00000358389 MT1MQ8N339 61 aa3.43□□□□□ -1.86
CNOT3-202ENST00000358389 KRTAP9-7A8MTY7 169 aa3.42□□□□□ -1.86
CNOT3-202ENST00000358389 LCE3EQ5T5B0 92 aa3.4□□□□□ -1.86
CNOT3-202ENST00000358389 MACF1Q9UPN3 7388 aaKnown RBP3.33□□□□□ -1.88
CNOT3-202ENST00000358389 MT4P47944 62 aa3.27□□□□□ -1.89
CNOT3-202ENST00000358389 KRTAP6-1Q3LI64 71 aa3.23□□□□□ -1.89
CNOT3-202ENST00000358389 MT1AP04731 61 aa3.22□□□□□ -1.89
CNOT3-202ENST00000358389 KRTAP5-5Q701N2 237 aaPredicted RBP3.21□□□□□ -1.9
CNOT3-202ENST00000358389 MT3P25713 68 aa3.19□□□□□ -1.9
CNOT3-202ENST00000358389 MUC19Q7Z5P9 8384 aa3.18□□□□□ -1.9
CNOT3-202ENST00000358389 KRTAP6-2Q3LI66 62 aa3.17□□□□□ -1.9
CNOT3-202ENST00000358389 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.17□□□□□ -1.9
CNOT3-202ENST00000358389 KRTAP6-3Q3LI67 103 aa3.17□□□□□ -1.9
CNOT3-202ENST00000358389 LCE1AQ5T7P2 110 aa3.13□□□□□ -1.91
CNOT3-202ENST00000358389 LCE5AQ5TCM9 118 aa3.12□□□□□ -1.91
CNOT3-202ENST00000358389 KRTAP20-1Q3LI63 56 aa3.1□□□□□ -1.91
CNOT3-202ENST00000358389 LCE1DQ5T752 114 aa3.04□□□□□ -1.92
CNOT3-202ENST00000358389 LCE1BQ5T7P3 118 aa3.04□□□□□ -1.92
CNOT3-202ENST00000358389 KRTAP2-2Q9BYT5 123 aa3□□□□□ -1.93
CNOT3-202ENST00000358389 MDN1Q9NU22 5596 aa2.99□□□□□ -1.93
CNOT3-202ENST00000358389 LCE1EQ5T753 118 aa2.99□□□□□ -1.93
CNOT3-202ENST00000358389 LCE4AQ5TA78 99 aa2.89□□□□□ -1.95
CNOT3-202ENST00000358389 KRTAP9-4Q9BYQ2 154 aa2.88□□□□□ -1.95
CNOT3-202ENST00000358389 NEBP20929 6669 aa2.79□□□□□ -1.96
CNOT3-202ENST00000358389 KRTAP5-9P26371 169 aa2.79□□□□□ -1.96
CNOT3-202ENST00000358389 GPR98Q8WXG9 6306 aa2.75□□□□□ -1.97
CNOT3-202ENST00000358389 KRTAP4-11Q9BYQ6 195 aa2.62□□□□□ -1.99
CNOT3-202ENST00000358389 KRTAP4-6Q9BYQ5 205 aa2.6□□□□□ -1.99
CNOT3-202ENST00000358389 LCE1FQ5T754 118 aa2.52□□□□□ -2.01
CNOT3-202ENST00000358389 KRTAP20-2Q3LI61 65 aa2.51□□□□□ -2.01
CNOT3-202ENST00000358389 MUC5ACP98088 5654 aa2.5□□□□□ -2.01
CNOT3-202ENST00000358389 LCE1CQ5T751 118 aa2.5□□□□□ -2.01
CNOT3-202ENST00000358389 KRTAP9-9Q9BYP9 154 aa2.47□□□□□ -2.01
CNOT3-202ENST00000358389 KRTAP5-4Q6L8H1 288 aa2.44□□□□□ -2.02
CNOT3-202ENST00000358389 HMCN1Q96RW7 5635 aa2.42□□□□□ -2.02
CNOT3-202ENST00000358389 KRTAP5-2Q701N4 177 aa2.36□□□□□ -2.03
CNOT3-202ENST00000358389 KRTAP4-4Q9BYR3 166 aa2.31□□□□□ -2.04
CNOT3-202ENST00000358389 KRTAP5-10Q6L8G5 202 aa2.29□□□□□ -2.04
CNOT3-202ENST00000358389 KRTAP4-12Q9BQ66 201 aa2.22□□□□□ -2.05
CNOT3-202ENST00000358389 KRTAP4-2Q9BYR5 136 aa2.22□□□□□ -2.05
CNOT3-202ENST00000358389 AHNAK2Q8IVF2 5795 aa2.21□□□□□ -2.06
CNOT3-202ENST00000358389 KRTAP5-3Q6L8H2 238 aa2.18□□□□□ -2.06
CNOT3-202ENST00000358389 KRTAP5-1Q6L8H4 278 aa2.15□□□□□ -2.07
CNOT3-202ENST00000358389 KRTAP21-1Q3LI58 79 aa2.01□□□□□ -2.09
CNOT3-202ENST00000358389 KRTAP5-8O75690 187 aa1.97□□□□□ -2.09
CNOT3-202ENST00000358389 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.97□□□□□ -2.09
CNOT3-202ENST00000358389 KRTAP21-2Q3LI59 83 aa1.96□□□□□ -2.1
CNOT3-202ENST00000358389 KRTAP5-7Q6L8G8 165 aa1.96□□□□□ -2.1
CNOT3-202ENST00000358389 AHNAKQ09666 5890 aaKnown RBP1.85□□□□□ -2.11
CNOT3-202ENST00000358389 MUC5BQ9HC84 5762 aaPredicted RBP1.85□□□□□ -2.11
CNOT3-202ENST00000358389 KRTAP5-11Q6L8G4 156 aa1.66□□□□□ -2.14
CNOT3-202ENST00000358389 PHGR1C9JFL3 82 aa1.64□□□□□ -2.15
CNOT3-202ENST00000358389 MUC16Q8WXI7 14507 aa1.1□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 7.2 ms