RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 LOC100996750A0A140TA64 210 aa6.89□□□□□ -1.31
COL13A1-202ENST00000357811 KRTAP2-3P0C7H8 128 aa6.85□□□□□ -1.31
COL13A1-202ENST00000357811 KRTAP2-4Q9BYR9 128 aa6.85□□□□□ -1.31
COL13A1-202ENST00000357811 KRTAP2-1Q9BYU5 128 aa6.85□□□□□ -1.31
COL13A1-202ENST00000357811 CRCT1Q9UGL9 99 aa6.82□□□□□ -1.32
COL13A1-202ENST00000357811 KRTAP19-6Q3LI70 58 aa6.81□□□□□ -1.32
COL13A1-202ENST00000357811 MT1GP13640 62 aa6.76□□□□□ -1.33
COL13A1-202ENST00000357811 MT1MQ8N339 61 aa6.59□□□□□ -1.35
COL13A1-202ENST00000357811 KRTAP19-4Q3LI73 84 aa6.59□□□□□ -1.35
COL13A1-202ENST00000357811 KRTAP19-3Q7Z4W3 81 aa6.57□□□□□ -1.36
COL13A1-202ENST00000357811 MACF1Q9UPN3 7388 aaKnown RBP6.56□□□□□ -1.36
COL13A1-202ENST00000357811 SYNE1Q8NF91 8797 aaKnown RBP6.5□□□□□ -1.37
COL13A1-202ENST00000357811 SPRR2FQ96RM1 72 aa6.5□□□□□ -1.37
COL13A1-202ENST00000357811 SYNE2Q8WXH0 6885 aaKnown RBP6.46□□□□□ -1.37
COL13A1-202ENST00000357811 MDN1Q9NU22 5596 aa6.36□□□□□ -1.39
COL13A1-202ENST00000357811 LCE5AQ5TCM9 118 aa6.31□□□□□ -1.4
COL13A1-202ENST00000357811 LCE3BQ5TA77 95 aa6.3□□□□□ -1.4
COL13A1-202ENST00000357811 KRTAP12-4P60329 112 aa6.29□□□□□ -1.4
COL13A1-202ENST00000357811 KRTAP4-9Q9BYQ8 210 aa6.25□□□□□ -1.41
COL13A1-202ENST00000357811 OBSCNQ5VST9 7968 aa6.2□□□□□ -1.42
COL13A1-202ENST00000357811 KRTAP6-1Q3LI64 71 aa6.07□□□□□ -1.44
COL13A1-202ENST00000357811 LCE1AQ5T7P2 110 aa5.92□□□□□ -1.46
COL13A1-202ENST00000357811 KRTAP9-2Q9BYQ4 174 aa5.89□□□□□ -1.47
COL13A1-202ENST00000357811 SPRR2EP22531 72 aa5.85□□□□□ -1.47
COL13A1-202ENST00000357811 SPRR2BP35325 72 aa5.85□□□□□ -1.47
COL13A1-202ENST00000357811 SPRR2AP35326 72 aa5.85□□□□□ -1.47
COL13A1-202ENST00000357811 MT1AP04731 61 aa5.84□□□□□ -1.47
COL13A1-202ENST00000357811 LCE3DQ9BYE3 92 aa5.79□□□□□ -1.48
COL13A1-202ENST00000357811 KRTAP5-9P26371 169 aa5.73□□□□□ -1.49
COL13A1-202ENST00000357811 KRTAP5-5Q701N2 237 aaPredicted RBP5.71□□□□□ -1.5
COL13A1-202ENST00000357811 KRTAP9-7A8MTY7 169 aa5.69□□□□□ -1.5
COL13A1-202ENST00000357811 LCE3EQ5T5B0 92 aa5.68□□□□□ -1.5
COL13A1-202ENST00000357811 PRM1P04553 51 aa5.64□□□□□ -1.51
COL13A1-202ENST00000357811 SPRR2DP22532 72 aa5.56□□□□□ -1.52
COL13A1-202ENST00000357811 KRTAP9-4Q9BYQ2 154 aa5.52□□□□□ -1.53
COL13A1-202ENST00000357811 KRTAP6-2Q3LI66 62 aa5.46□□□□□ -1.53
COL13A1-202ENST00000357811 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.29□□□□□ -1.56
COL13A1-202ENST00000357811 MT3P25713 68 aa5.27□□□□□ -1.57
COL13A1-202ENST00000357811 KRTAP9-6A0A140TA67 174 aa5.24□□□□□ -1.57
COL13A1-202ENST00000357811 KRTAP6-3Q3LI67 103 aa5.24□□□□□ -1.57
COL13A1-202ENST00000357811 MT4P47944 62 aa5.08□□□□□ -1.6
COL13A1-202ENST00000357811 LCE1EQ5T753 118 aa5.07□□□□□ -1.6
COL13A1-202ENST00000357811 KRTAP4-6Q9BYQ5 205 aa5.07□□□□□ -1.6
COL13A1-202ENST00000357811 KRTAP2-2Q9BYT5 123 aa5.04□□□□□ -1.6
COL13A1-202ENST00000357811 NEBP20929 6669 aa5.01□□□□□ -1.61
COL13A1-202ENST00000357811 KRTAP5-4Q6L8H1 288 aa4.95□□□□□ -1.62
COL13A1-202ENST00000357811 HMCN1Q96RW7 5635 aa4.83□□□□□ -1.64
COL13A1-202ENST00000357811 LCE1DQ5T752 114 aa4.8□□□□□ -1.64
COL13A1-202ENST00000357811 LCE1FQ5T754 118 aa4.78□□□□□ -1.64
COL13A1-202ENST00000357811 KRTAP20-2Q3LI61 65 aa4.78□□□□□ -1.64
COL13A1-202ENST00000357811 LCE4AQ5TA78 99 aa4.71□□□□□ -1.66
COL13A1-202ENST00000357811 KRTAP9-9Q9BYP9 154 aa4.65□□□□□ -1.67
COL13A1-202ENST00000357811 KRTAP5-2Q701N4 177 aa4.62□□□□□ -1.67
COL13A1-202ENST00000357811 MUC5ACP98088 5654 aa4.62□□□□□ -1.67
COL13A1-202ENST00000357811 LCE1BQ5T7P3 118 aa4.5□□□□□ -1.69
COL13A1-202ENST00000357811 KRTAP5-3Q6L8H2 238 aa4.47□□□□□ -1.69
COL13A1-202ENST00000357811 MUC19Q7Z5P9 8384 aa4.4□□□□□ -1.7
COL13A1-202ENST00000357811 KRTAP20-1Q3LI63 56 aa4.38□□□□□ -1.71
COL13A1-202ENST00000357811 KRTAP4-11Q9BYQ6 195 aa4.27□□□□□ -1.73
COL13A1-202ENST00000357811 KRTAP5-10Q6L8G5 202 aa4.18□□□□□ -1.74
COL13A1-202ENST00000357811 KRTAP4-2Q9BYR5 136 aa4.09□□□□□ -1.75
COL13A1-202ENST00000357811 KRTAP5-1Q6L8H4 278 aa4.03□□□□□ -1.76
COL13A1-202ENST00000357811 LCE1CQ5T751 118 aa3.98□□□□□ -1.77
COL13A1-202ENST00000357811 KRTAP21-2Q3LI59 83 aa3.84□□□□□ -1.79
COL13A1-202ENST00000357811 KRTAP4-4Q9BYR3 166 aa3.8□□□□□ -1.8
COL13A1-202ENST00000357811 AHNAK2Q8IVF2 5795 aa3.8□□□□□ -1.8
COL13A1-202ENST00000357811 KRTAP5-8O75690 187 aa3.75□□□□□ -1.81
COL13A1-202ENST00000357811 MUC5BQ9HC84 5762 aaPredicted RBP3.73□□□□□ -1.81
COL13A1-202ENST00000357811 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.66□□□□□ -1.82
COL13A1-202ENST00000357811 KRTAP4-12Q9BQ66 201 aa3.57□□□□□ -1.84
COL13A1-202ENST00000357811 KRTAP5-7Q6L8G8 165 aa3.49□□□□□ -1.85
COL13A1-202ENST00000357811 KRTAP21-1Q3LI58 79 aa3.45□□□□□ -1.86
COL13A1-202ENST00000357811 KRTAP5-11Q6L8G4 156 aa3.39□□□□□ -1.87
COL13A1-202ENST00000357811 GPR98Q8WXG9 6306 aa3.24□□□□□ -1.89
COL13A1-202ENST00000357811 PHGR1C9JFL3 82 aa2.98□□□□□ -1.93
COL13A1-202ENST00000357811 AHNAKQ09666 5890 aaKnown RBP2.75□□□□□ -1.97
COL13A1-202ENST00000357811 MUC16Q8WXI7 14507 aa2□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 6.1 ms