RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 MT1EP04732 61 aa4.04□□□□□ -1.76
SMARCAL1-201ENST00000357276 KRTAP9-2Q9BYQ4 174 aa4.03□□□□□ -1.76
SMARCAL1-201ENST00000357276 CRCT1Q9UGL9 99 aa3.91□□□□□ -1.78
SMARCAL1-201ENST00000357276 FCGBPQ9Y6R7 5405 aaPredicted RBP3.91□□□□□ -1.78
SMARCAL1-201ENST00000357276 LOC100996750A0A140TA64 210 aa3.86□□□□□ -1.79
SMARCAL1-201ENST00000357276 KRTAP12-4P60329 112 aa3.83□□□□□ -1.8
SMARCAL1-201ENST00000357276 KRTAP4-3Q9BYR4 195 aa3.8□□□□□ -1.8
SMARCAL1-201ENST00000357276 MT1GP13640 62 aa3.79□□□□□ -1.8
SMARCAL1-201ENST00000357276 MT1MQ8N339 61 aa3.75□□□□□ -1.81
SMARCAL1-201ENST00000357276 KRTAP5-9P26371 169 aa3.73□□□□□ -1.81
SMARCAL1-201ENST00000357276 KRTAP9-6A0A140TA67 174 aa3.7□□□□□ -1.82
SMARCAL1-201ENST00000357276 KRTAP19-3Q7Z4W3 81 aa3.7□□□□□ -1.82
SMARCAL1-201ENST00000357276 SPRR2FQ96RM1 72 aa3.67□□□□□ -1.82
SMARCAL1-201ENST00000357276 MACF1Q9UPN3 7388 aaKnown RBP3.66□□□□□ -1.82
SMARCAL1-201ENST00000357276 LCE5AQ5TCM9 118 aa3.64□□□□□ -1.83
SMARCAL1-201ENST00000357276 KRTAP6-3Q3LI67 103 aa3.63□□□□□ -1.83
SMARCAL1-201ENST00000357276 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.62□□□□□ -1.83
SMARCAL1-201ENST00000357276 MT1AP04731 61 aa3.62□□□□□ -1.83
SMARCAL1-201ENST00000357276 MUC12Q9UKN1 5478 aa3.56□□□□□ -1.84
SMARCAL1-201ENST00000357276 LCE1AQ5T7P2 110 aa3.56□□□□□ -1.84
SMARCAL1-201ENST00000357276 LCE3BQ5TA77 95 aa3.55□□□□□ -1.84
SMARCAL1-201ENST00000357276 KRTAP4-9Q9BYQ8 210 aa3.55□□□□□ -1.84
SMARCAL1-201ENST00000357276 SYNE2Q8WXH0 6885 aaKnown RBP3.52□□□□□ -1.85
SMARCAL1-201ENST00000357276 KRTAP5-5Q701N2 237 aaPredicted RBP3.51□□□□□ -1.85
SMARCAL1-201ENST00000357276 SPRR2EP22531 72 aa3.48□□□□□ -1.85
SMARCAL1-201ENST00000357276 SPRR2BP35325 72 aa3.48□□□□□ -1.85
SMARCAL1-201ENST00000357276 SPRR2AP35326 72 aa3.48□□□□□ -1.85
SMARCAL1-201ENST00000357276 LCE3DQ9BYE3 92 aa3.46□□□□□ -1.85
SMARCAL1-201ENST00000357276 KRTAP6-1Q3LI64 71 aa3.46□□□□□ -1.86
SMARCAL1-201ENST00000357276 LCE3EQ5T5B0 92 aa3.45□□□□□ -1.86
SMARCAL1-201ENST00000357276 KRTAP9-7A8MTY7 169 aa3.45□□□□□ -1.86
SMARCAL1-201ENST00000357276 PRM1P04553 51 aa3.43□□□□□ -1.86
SMARCAL1-201ENST00000357276 OBSCNQ5VST9 7968 aa3.41□□□□□ -1.86
SMARCAL1-201ENST00000357276 SYNE1Q8NF91 8797 aaKnown RBP3.38□□□□□ -1.87
SMARCAL1-201ENST00000357276 DSTQ03001 7570 aaKnown RBP3.37□□□□□ -1.87
SMARCAL1-201ENST00000357276 SPRR2DP22532 72 aa3.37□□□□□ -1.87
SMARCAL1-201ENST00000357276 MDN1Q9NU22 5596 aa3.36□□□□□ -1.87
SMARCAL1-201ENST00000357276 NEBP20929 6669 aa3.33□□□□□ -1.88
SMARCAL1-201ENST00000357276 KRTAP6-2Q3LI66 62 aa3.26□□□□□ -1.89
SMARCAL1-201ENST00000357276 KRTAP9-4Q9BYQ2 154 aa3.2□□□□□ -1.9
SMARCAL1-201ENST00000357276 KRTAP5-4Q6L8H1 288 aa3.15□□□□□ -1.91
SMARCAL1-201ENST00000357276 KRTAP2-2Q9BYT5 123 aa3.1□□□□□ -1.91
SMARCAL1-201ENST00000357276 LCE4AQ5TA78 99 aa3.08□□□□□ -1.92
SMARCAL1-201ENST00000357276 KRTAP20-1Q3LI63 56 aa3.03□□□□□ -1.92
SMARCAL1-201ENST00000357276 MT3P25713 68 aa3.02□□□□□ -1.93
SMARCAL1-201ENST00000357276 KRTAP20-2Q3LI61 65 aa2.89□□□□□ -1.95
SMARCAL1-201ENST00000357276 KRTAP5-2Q701N4 177 aa2.88□□□□□ -1.95
SMARCAL1-201ENST00000357276 KRTAP4-6Q9BYQ5 205 aa2.88□□□□□ -1.95
SMARCAL1-201ENST00000357276 MT4P47944 62 aa2.86□□□□□ -1.95
SMARCAL1-201ENST00000357276 LCE1DQ5T752 114 aa2.85□□□□□ -1.95
SMARCAL1-201ENST00000357276 KRTAP5-3Q6L8H2 238 aa2.81□□□□□ -1.96
SMARCAL1-201ENST00000357276 MUC19Q7Z5P9 8384 aa2.8□□□□□ -1.96
SMARCAL1-201ENST00000357276 HMCN1Q96RW7 5635 aa2.76□□□□□ -1.97
SMARCAL1-201ENST00000357276 LCE1EQ5T753 118 aa2.7□□□□□ -1.98
SMARCAL1-201ENST00000357276 LCE1FQ5T754 118 aa2.62□□□□□ -1.99
SMARCAL1-201ENST00000357276 MUC5ACP98088 5654 aa2.61□□□□□ -1.99
SMARCAL1-201ENST00000357276 KRTAP5-10Q6L8G5 202 aa2.56□□□□□ -2
SMARCAL1-201ENST00000357276 KRTAP4-11Q9BYQ6 195 aa2.54□□□□□ -2
SMARCAL1-201ENST00000357276 KRTAP5-1Q6L8H4 278 aa2.51□□□□□ -2.01
SMARCAL1-201ENST00000357276 KRTAP9-9Q9BYP9 154 aa2.5□□□□□ -2.01
SMARCAL1-201ENST00000357276 AHNAK2Q8IVF2 5795 aa2.49□□□□□ -2.01
SMARCAL1-201ENST00000357276 KRTAP5-7Q6L8G8 165 aa2.42□□□□□ -2.02
SMARCAL1-201ENST00000357276 KRTAP5-8O75690 187 aa2.41□□□□□ -2.02
SMARCAL1-201ENST00000357276 GPR98Q8WXG9 6306 aa2.4□□□□□ -2.02
SMARCAL1-201ENST00000357276 LCE1CQ5T751 118 aa2.39□□□□□ -2.03
SMARCAL1-201ENST00000357276 LCE1BQ5T7P3 118 aa2.39□□□□□ -2.03
SMARCAL1-201ENST00000357276 KRTAP4-2Q9BYR5 136 aa2.36□□□□□ -2.03
SMARCAL1-201ENST00000357276 KRTAP4-12Q9BQ66 201 aa2.34□□□□□ -2.03
SMARCAL1-201ENST00000357276 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.29□□□□□ -2.04
SMARCAL1-201ENST00000357276 KRTAP21-2Q3LI59 83 aa2.26□□□□□ -2.05
SMARCAL1-201ENST00000357276 KRTAP21-1Q3LI58 79 aa2.26□□□□□ -2.05
SMARCAL1-201ENST00000357276 MUC5BQ9HC84 5762 aaPredicted RBP2.13□□□□□ -2.07
SMARCAL1-201ENST00000357276 KRTAP5-11Q6L8G4 156 aa2.11□□□□□ -2.07
SMARCAL1-201ENST00000357276 AHNAKQ09666 5890 aaKnown RBP1.99□□□□□ -2.09
SMARCAL1-201ENST00000357276 KRTAP4-4Q9BYR3 166 aa1.97□□□□□ -2.09
SMARCAL1-201ENST00000357276 PHGR1C9JFL3 82 aa1.8□□□□□ -2.12
SMARCAL1-201ENST00000357276 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 90.3 ms