RNA–Protein interactions for RNA: ENST00000357214.5

SFPQ-201, Transcript of splicing factor proline and glutamine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFPQ, Length 3,747 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-201ENST00000357214 SYNE2Q8WXH0 6885 aaKnown RBP4.3□□□□□ -1.72
SFPQ-201ENST00000357214 KRTAP9-6A8MVA2 160 aa4.27□□□□□ -1.73
SFPQ-201ENST00000357214 KRTAP19-7Q3SYF9 63 aa4.25□□□□□ -1.73
SFPQ-201ENST00000357214 KRTAP2-3P0C7H8 128 aa4.23□□□□□ -1.73
SFPQ-201ENST00000357214 KRTAP2-4Q9BYR9 128 aa4.23□□□□□ -1.73
SFPQ-201ENST00000357214 KRTAP2-1Q9BYU5 128 aa4.23□□□□□ -1.73
SFPQ-201ENST00000357214 MACF1Q9UPN3 7388 aaKnown RBP4.22□□□□□ -1.73
SFPQ-201ENST00000357214 MT1LQ93083 61 aa4.21□□□□□ -1.74
SFPQ-201ENST00000357214 MT1EP04732 61 aa4.2□□□□□ -1.74
SFPQ-201ENST00000357214 KRTAP4-3Q9BYR4 195 aa4.19□□□□□ -1.74
SFPQ-201ENST00000357214 KRTAP19-6Q3LI70 58 aa4.18□□□□□ -1.74
SFPQ-201ENST00000357214 KRTAP12-4P60329 112 aa4.18□□□□□ -1.74
SFPQ-201ENST00000357214 KRTAP19-4Q3LI73 84 aa4.15□□□□□ -1.75
SFPQ-201ENST00000357214 MT1GP13640 62 aa4.14□□□□□ -1.75
SFPQ-201ENST00000357214 LOC100996750A0A140TA64 210 aa4.1□□□□□ -1.75
SFPQ-201ENST00000357214 SPRR2EP22531 72 aa3.99□□□□□ -1.77
SFPQ-201ENST00000357214 SPRR2BP35325 72 aa3.99□□□□□ -1.77
SFPQ-201ENST00000357214 SPRR2AP35326 72 aa3.99□□□□□ -1.77
SFPQ-201ENST00000357214 KRTAP19-3Q7Z4W3 81 aa3.99□□□□□ -1.77
SFPQ-201ENST00000357214 MDN1Q9NU22 5596 aa3.98□□□□□ -1.77
SFPQ-201ENST00000357214 MT1MQ8N339 61 aa3.96□□□□□ -1.78
SFPQ-201ENST00000357214 KRTAP9-6A0A140TA67 174 aa3.92□□□□□ -1.78
SFPQ-201ENST00000357214 LCE3BQ5TA77 95 aa3.92□□□□□ -1.78
SFPQ-201ENST00000357214 SPRR2DP22532 72 aa3.8□□□□□ -1.8
SFPQ-201ENST00000357214 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.8□□□□□ -1.8
SFPQ-201ENST00000357214 PRM1P04553 51 aa3.79□□□□□ -1.8
SFPQ-201ENST00000357214 LCE1AQ5T7P2 110 aa3.75□□□□□ -1.81
SFPQ-201ENST00000357214 KRTAP4-9Q9BYQ8 210 aa3.75□□□□□ -1.81
SFPQ-201ENST00000357214 KRTAP9-7A8MTY7 169 aa3.73□□□□□ -1.81
SFPQ-201ENST00000357214 LCE5AQ5TCM9 118 aa3.72□□□□□ -1.81
SFPQ-201ENST00000357214 KRTAP6-3Q3LI67 103 aa3.71□□□□□ -1.81
SFPQ-201ENST00000357214 KRTAP2-2Q9BYT5 123 aa3.65□□□□□ -1.82
SFPQ-201ENST00000357214 LCE1EQ5T753 118 aa3.61□□□□□ -1.83
SFPQ-201ENST00000357214 LCE3DQ9BYE3 92 aa3.6□□□□□ -1.83
SFPQ-201ENST00000357214 KRTAP6-1Q3LI64 71 aa3.59□□□□□ -1.83
SFPQ-201ENST00000357214 MT4P47944 62 aa3.58□□□□□ -1.84
SFPQ-201ENST00000357214 KRTAP5-9P26371 169 aa3.57□□□□□ -1.84
SFPQ-201ENST00000357214 LCE3EQ5T5B0 92 aa3.57□□□□□ -1.84
SFPQ-201ENST00000357214 MT1AP04731 61 aa3.56□□□□□ -1.84
SFPQ-201ENST00000357214 KRTAP5-5Q701N2 237 aaPredicted RBP3.47□□□□□ -1.85
SFPQ-201ENST00000357214 LCE1DQ5T752 114 aa3.42□□□□□ -1.86
SFPQ-201ENST00000357214 NEBP20929 6669 aa3.42□□□□□ -1.86
SFPQ-201ENST00000357214 MUC19Q7Z5P9 8384 aa3.41□□□□□ -1.86
SFPQ-201ENST00000357214 KRTAP6-2Q3LI66 62 aa3.39□□□□□ -1.87
SFPQ-201ENST00000357214 MT3P25713 68 aa3.32□□□□□ -1.88
SFPQ-201ENST00000357214 KRTAP9-4Q9BYQ2 154 aa3.32□□□□□ -1.88
SFPQ-201ENST00000357214 KRTAP4-6Q9BYQ5 205 aa3.24□□□□□ -1.89
SFPQ-201ENST00000357214 KRTAP20-1Q3LI63 56 aa3.21□□□□□ -1.9
SFPQ-201ENST00000357214 LCE1BQ5T7P3 118 aa3.14□□□□□ -1.91
SFPQ-201ENST00000357214 LCE1FQ5T754 118 aa3.08□□□□□ -1.92
SFPQ-201ENST00000357214 HMCN1Q96RW7 5635 aa3.08□□□□□ -1.92
SFPQ-201ENST00000357214 LCE4AQ5TA78 99 aa2.97□□□□□ -1.93
SFPQ-201ENST00000357214 MUC5ACP98088 5654 aa2.97□□□□□ -1.93
SFPQ-201ENST00000357214 KRTAP20-2Q3LI61 65 aa2.95□□□□□ -1.94
SFPQ-201ENST00000357214 KRTAP5-4Q6L8H1 288 aa2.93□□□□□ -1.94
SFPQ-201ENST00000357214 KRTAP4-11Q9BYQ6 195 aa2.85□□□□□ -1.95
SFPQ-201ENST00000357214 GPR98Q8WXG9 6306 aa2.77□□□□□ -1.97
SFPQ-201ENST00000357214 KRTAP4-12Q9BQ66 201 aa2.7□□□□□ -1.98
SFPQ-201ENST00000357214 KRTAP5-3Q6L8H2 238 aa2.69□□□□□ -1.98
SFPQ-201ENST00000357214 KRTAP9-9Q9BYP9 154 aa2.68□□□□□ -1.98
SFPQ-201ENST00000357214 KRTAP5-2Q701N4 177 aa2.64□□□□□ -1.99
SFPQ-201ENST00000357214 AHNAK2Q8IVF2 5795 aa2.61□□□□□ -1.99
SFPQ-201ENST00000357214 MUC5BQ9HC84 5762 aaPredicted RBP2.55□□□□□ -2
SFPQ-201ENST00000357214 KRTAP4-4Q9BYR3 166 aa2.55□□□□□ -2
SFPQ-201ENST00000357214 KRTAP4-2Q9BYR5 136 aa2.54□□□□□ -2
SFPQ-201ENST00000357214 KRTAP5-10Q6L8G5 202 aa2.42□□□□□ -2.02
SFPQ-201ENST00000357214 LCE1CQ5T751 118 aa2.41□□□□□ -2.02
SFPQ-201ENST00000357214 KRTAP5-8O75690 187 aa2.41□□□□□ -2.02
SFPQ-201ENST00000357214 KRTAP5-1Q6L8H4 278 aa2.39□□□□□ -2.03
SFPQ-201ENST00000357214 KRTAP21-1Q3LI58 79 aa2.24□□□□□ -2.05
SFPQ-201ENST00000357214 KRTAP21-2Q3LI59 83 aa2.19□□□□□ -2.06
SFPQ-201ENST00000357214 AHNAKQ09666 5890 aaKnown RBP2.11□□□□□ -2.07
SFPQ-201ENST00000357214 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.1□□□□□ -2.07
SFPQ-201ENST00000357214 KRTAP5-7Q6L8G8 165 aa2.05□□□□□ -2.08
SFPQ-201ENST00000357214 KRTAP5-11Q6L8G4 156 aa2.02□□□□□ -2.09
SFPQ-201ENST00000357214 PHGR1C9JFL3 82 aa1.74□□□□□ -2.13
SFPQ-201ENST00000357214 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 5.8 ms