RNA–Protein interactions for RNA: ENST00000357164.3

GM2A-201, Transcript of GM2 ganglioside activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GM2A, Length 3,896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GM2A-201ENST00000357164 USH2AO75445 5202 aa3.11□□□□□ -1.91
GM2A-201ENST00000357164 KRTAP19-5Q3LI72 72 aa3.09□□□□□ -1.91
GM2A-201ENST00000357164 FCGBPQ9Y6R7 5405 aaPredicted RBP3.08□□□□□ -1.92
GM2A-201ENST00000357164 KRTAP9-3Q9BYQ3 159 aa3.05□□□□□ -1.92
GM2A-201ENST00000357164 KRTAP4-7Q9BYR0 210 aa3.01□□□□□ -1.93
GM2A-201ENST00000357164 KRTAP4-8A0A0G2JLE6 195 aa3□□□□□ -1.93
GM2A-201ENST00000357164 KRTAP4-8Q9BYQ9 185 aa3□□□□□ -1.93
GM2A-201ENST00000357164 KRTAP19-7Q3SYF9 63 aa2.96□□□□□ -1.94
GM2A-201ENST00000357164 LCE1FQ5T754 118 aa2.95□□□□□ -1.94
GM2A-201ENST00000357164 LCE3BQ5TA77 95 aa2.87□□□□□ -1.95
GM2A-201ENST00000357164 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.85□□□□□ -1.95
GM2A-201ENST00000357164 MT1LQ93083 61 aa2.83□□□□□ -1.96
GM2A-201ENST00000357164 KRTAP9-2Q9BYQ4 174 aa2.83□□□□□ -1.96
GM2A-201ENST00000357164 KRTAP4-12Q9BQ66 201 aa2.82□□□□□ -1.96
GM2A-201ENST00000357164 KRTAP12-4P60329 112 aa2.79□□□□□ -1.96
GM2A-201ENST00000357164 MT1EP04732 61 aa2.79□□□□□ -1.96
GM2A-201ENST00000357164 SYNE2Q8WXH0 6885 aaKnown RBP2.78□□□□□ -1.96
GM2A-201ENST00000357164 LOC100996750A0A140TA64 210 aa2.78□□□□□ -1.96
GM2A-201ENST00000357164 MT1GP13640 62 aa2.77□□□□□ -1.97
GM2A-201ENST00000357164 LCE3EQ5T5B0 92 aa2.76□□□□□ -1.97
GM2A-201ENST00000357164 KRTAP4-3Q9BYR4 195 aa2.76□□□□□ -1.97
GM2A-201ENST00000357164 MUC12Q9UKN1 5478 aa2.75□□□□□ -1.97
GM2A-201ENST00000357164 SSPOA2VEC9 5147 aa2.75□□□□□ -1.97
GM2A-201ENST00000357164 LCE1AQ5T7P2 110 aa2.73□□□□□ -1.97
GM2A-201ENST00000357164 KRTAP4-9Q9BYQ8 210 aa2.69□□□□□ -1.98
GM2A-201ENST00000357164 KRTAP4-6Q9BYQ5 205 aa2.68□□□□□ -1.98
GM2A-201ENST00000357164 KRTAP5-5Q701N2 237 aaPredicted RBP2.65□□□□□ -1.99
GM2A-201ENST00000357164 KRTAP19-6Q3LI70 58 aa2.64□□□□□ -1.99
GM2A-201ENST00000357164 KRTAP2-2Q9BYT5 123 aa2.63□□□□□ -1.99
GM2A-201ENST00000357164 MT1AP04731 61 aa2.62□□□□□ -1.99
GM2A-201ENST00000357164 SPRR2FQ96RM1 72 aa2.6□□□□□ -1.99
GM2A-201ENST00000357164 MUC19Q7Z5P9 8384 aa2.58□□□□□ -2
GM2A-201ENST00000357164 MT1MQ8N339 61 aa2.56□□□□□ -2
GM2A-201ENST00000357164 MT3P25713 68 aa2.55□□□□□ -2
GM2A-201ENST00000357164 KRTAP6-3Q3LI67 103 aa2.55□□□□□ -2
GM2A-201ENST00000357164 LCE1EQ5T753 118 aa2.53□□□□□ -2
GM2A-201ENST00000357164 LCE3DQ9BYE3 92 aa2.51□□□□□ -2.01
GM2A-201ENST00000357164 LCE1DQ5T752 114 aa2.5□□□□□ -2.01
GM2A-201ENST00000357164 PRM1P04553 51 aa2.49□□□□□ -2.01
GM2A-201ENST00000357164 MACF1Q9UPN3 7388 aaKnown RBP2.48□□□□□ -2.01
GM2A-201ENST00000357164 KRTAP19-3Q7Z4W3 81 aa2.48□□□□□ -2.01
GM2A-201ENST00000357164 KRTAP6-1Q3LI64 71 aa2.4□□□□□ -2.02
GM2A-201ENST00000357164 KRTAP4-11Q9BYQ6 195 aa2.37□□□□□ -2.03
GM2A-201ENST00000357164 KRTAP6-2Q3LI66 62 aa2.32□□□□□ -2.04
GM2A-201ENST00000357164 KRTAP5-9P26371 169 aa2.31□□□□□ -2.04
GM2A-201ENST00000357164 MDN1Q9NU22 5596 aa2.3□□□□□ -2.04
GM2A-201ENST00000357164 SPRR2EP22531 72 aa2.24□□□□□ -2.05
GM2A-201ENST00000357164 SPRR2BP35325 72 aa2.24□□□□□ -2.05
GM2A-201ENST00000357164 SPRR2AP35326 72 aa2.24□□□□□ -2.05
GM2A-201ENST00000357164 KRTAP4-2Q9BYR5 136 aa2.2□□□□□ -2.06
GM2A-201ENST00000357164 MT4P47944 62 aa2.11□□□□□ -2.07
GM2A-201ENST00000357164 SPRR2DP22532 72 aa2.11□□□□□ -2.07
GM2A-201ENST00000357164 NEBP20929 6669 aa2.08□□□□□ -2.08
GM2A-201ENST00000357164 LCE1BQ5T7P3 118 aa2.08□□□□□ -2.08
GM2A-201ENST00000357164 KRTAP20-1Q3LI63 56 aa2.04□□□□□ -2.08
GM2A-201ENST00000357164 GPR98Q8WXG9 6306 aa1.98□□□□□ -2.09
GM2A-201ENST00000357164 KRTAP5-4Q6L8H1 288 aa1.95□□□□□ -2.1
GM2A-201ENST00000357164 KRTAP5-2Q701N4 177 aa1.91□□□□□ -2.1
GM2A-201ENST00000357164 HMCN1Q96RW7 5635 aa1.91□□□□□ -2.1
GM2A-201ENST00000357164 MUC5ACP98088 5654 aa1.9□□□□□ -2.11
GM2A-201ENST00000357164 MUC5BQ9HC84 5762 aaPredicted RBP1.9□□□□□ -2.11
GM2A-201ENST00000357164 KRTAP5-1Q6L8H4 278 aa1.9□□□□□ -2.11
GM2A-201ENST00000357164 KRTAP5-3Q6L8H2 238 aa1.89□□□□□ -2.11
GM2A-201ENST00000357164 KRTAP5-10Q6L8G5 202 aa1.87□□□□□ -2.11
GM2A-201ENST00000357164 KRTAP20-2Q3LI61 65 aa1.79□□□□□ -2.12
GM2A-201ENST00000357164 KRTAP4-4Q9BYR3 166 aa1.78□□□□□ -2.13
GM2A-201ENST00000357164 KRTAP21-1Q3LI58 79 aa1.75□□□□□ -2.13
GM2A-201ENST00000357164 KRTAP5-11Q6L8G4 156 aa1.7□□□□□ -2.14
GM2A-201ENST00000357164 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.65□□□□□ -2.15
GM2A-201ENST00000357164 KRTAP21-2Q3LI59 83 aa1.64□□□□□ -2.15
GM2A-201ENST00000357164 AHNAK2Q8IVF2 5795 aa1.63□□□□□ -2.15
GM2A-201ENST00000357164 LCE1CQ5T751 118 aa1.62□□□□□ -2.15
GM2A-201ENST00000357164 KRTAP5-7Q6L8G8 165 aa1.6□□□□□ -2.15
GM2A-201ENST00000357164 KRTAP5-8O75690 187 aa1.51□□□□□ -2.17
GM2A-201ENST00000357164 AHNAKQ09666 5890 aaKnown RBP1.45□□□□□ -2.18
GM2A-201ENST00000357164 PHGR1C9JFL3 82 aa1.18□□□□□ -2.22
GM2A-201ENST00000357164 MUC16Q8WXI7 14507 aa0.9□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 60.3 ms