RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 LOC100996750A0A140TA64 210 aa4.47□□□□□ -1.69
NCDN-201ENST00000356090 KRTAP4-3Q9BYR4 195 aa4.47□□□□□ -1.69
NCDN-201ENST00000356090 MT1GP13640 62 aa4.43□□□□□ -1.7
NCDN-201ENST00000356090 FCGBPQ9Y6R7 5405 aaPredicted RBP4.4□□□□□ -1.7
NCDN-201ENST00000356090 MUC12Q9UKN1 5478 aa4.4□□□□□ -1.71
NCDN-201ENST00000356090 SSPOA2VEC9 5147 aa4.38□□□□□ -1.71
NCDN-201ENST00000356090 SYNE1Q8NF91 8797 aaKnown RBP4.36□□□□□ -1.71
NCDN-201ENST00000356090 KRTAP12-4P60329 112 aa4.28□□□□□ -1.72
NCDN-201ENST00000356090 KRTAP19-4Q3LI73 84 aa4.25□□□□□ -1.73
NCDN-201ENST00000356090 OBSCNQ5VST9 7968 aa4.25□□□□□ -1.73
NCDN-201ENST00000356090 MT1MQ8N339 61 aa4.21□□□□□ -1.73
NCDN-201ENST00000356090 LCE3BQ5TA77 95 aa4.21□□□□□ -1.74
NCDN-201ENST00000356090 KRTAP19-3Q7Z4W3 81 aa4.19□□□□□ -1.74
NCDN-201ENST00000356090 SPRR2FQ96RM1 72 aa4.18□□□□□ -1.74
NCDN-201ENST00000356090 KRTAP19-6Q3LI70 58 aa4.18□□□□□ -1.74
NCDN-201ENST00000356090 KRTAP4-9Q9BYQ8 210 aa4.14□□□□□ -1.75
NCDN-201ENST00000356090 SYNE2Q8WXH0 6885 aaKnown RBP4.08□□□□□ -1.76
NCDN-201ENST00000356090 MACF1Q9UPN3 7388 aaKnown RBP4.01□□□□□ -1.77
NCDN-201ENST00000356090 LCE5AQ5TCM9 118 aa3.94□□□□□ -1.78
NCDN-201ENST00000356090 KRTAP6-1Q3LI64 71 aa3.91□□□□□ -1.78
NCDN-201ENST00000356090 LCE3DQ9BYE3 92 aa3.9□□□□□ -1.79
NCDN-201ENST00000356090 MDN1Q9NU22 5596 aa3.85□□□□□ -1.79
NCDN-201ENST00000356090 LCE3EQ5T5B0 92 aa3.83□□□□□ -1.8
NCDN-201ENST00000356090 KRTAP9-2Q9BYQ4 174 aa3.82□□□□□ -1.8
NCDN-201ENST00000356090 KRTAP9-7A8MTY7 169 aa3.82□□□□□ -1.8
NCDN-201ENST00000356090 PRM1P04553 51 aa3.8□□□□□ -1.8
NCDN-201ENST00000356090 LCE1AQ5T7P2 110 aa3.78□□□□□ -1.8
NCDN-201ENST00000356090 MT1AP04731 61 aa3.76□□□□□ -1.81
NCDN-201ENST00000356090 SPRR2EP22531 72 aa3.72□□□□□ -1.81
NCDN-201ENST00000356090 SPRR2BP35325 72 aa3.72□□□□□ -1.81
NCDN-201ENST00000356090 SPRR2AP35326 72 aa3.72□□□□□ -1.81
NCDN-201ENST00000356090 KRTAP6-3Q3LI67 103 aa3.69□□□□□ -1.82
NCDN-201ENST00000356090 LCE1EQ5T753 118 aa3.69□□□□□ -1.82
NCDN-201ENST00000356090 KRTAP2-2Q9BYT5 123 aa3.68□□□□□ -1.82
NCDN-201ENST00000356090 KRTAP5-5Q701N2 237 aaPredicted RBP3.64□□□□□ -1.83
NCDN-201ENST00000356090 KRTAP9-6A0A140TA67 174 aa3.6□□□□□ -1.83
NCDN-201ENST00000356090 KRTAP6-2Q3LI66 62 aa3.59□□□□□ -1.83
NCDN-201ENST00000356090 SPRR2DP22532 72 aa3.53□□□□□ -1.84
NCDN-201ENST00000356090 KRTAP9-4Q9BYQ2 154 aa3.52□□□□□ -1.85
NCDN-201ENST00000356090 KRTAP5-9P26371 169 aa3.49□□□□□ -1.85
NCDN-201ENST00000356090 LCE1DQ5T752 114 aa3.48□□□□□ -1.85
NCDN-201ENST00000356090 MT3P25713 68 aa3.45□□□□□ -1.86
NCDN-201ENST00000356090 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.41□□□□□ -1.86
NCDN-201ENST00000356090 MUC19Q7Z5P9 8384 aa3.29□□□□□ -1.88
NCDN-201ENST00000356090 MT4P47944 62 aa3.26□□□□□ -1.89
NCDN-201ENST00000356090 LCE1FQ5T754 118 aa3.25□□□□□ -1.89
NCDN-201ENST00000356090 KRTAP4-6Q9BYQ5 205 aa3.16□□□□□ -1.9
NCDN-201ENST00000356090 NEBP20929 6669 aa3.1□□□□□ -1.91
NCDN-201ENST00000356090 LCE1BQ5T7P3 118 aa3.02□□□□□ -1.93
NCDN-201ENST00000356090 KRTAP5-4Q6L8H1 288 aa2.98□□□□□ -1.93
NCDN-201ENST00000356090 KRTAP20-2Q3LI61 65 aa2.96□□□□□ -1.94
NCDN-201ENST00000356090 MUC5ACP98088 5654 aa2.92□□□□□ -1.94
NCDN-201ENST00000356090 KRTAP4-11Q9BYQ6 195 aa2.91□□□□□ -1.94
NCDN-201ENST00000356090 HMCN1Q96RW7 5635 aa2.9□□□□□ -1.95
NCDN-201ENST00000356090 KRTAP20-1Q3LI63 56 aa2.89□□□□□ -1.95
NCDN-201ENST00000356090 LCE4AQ5TA78 99 aa2.87□□□□□ -1.95
NCDN-201ENST00000356090 KRTAP4-12Q9BQ66 201 aa2.87□□□□□ -1.95
NCDN-201ENST00000356090 KRTAP5-2Q701N4 177 aa2.81□□□□□ -1.96
NCDN-201ENST00000356090 GPR98Q8WXG9 6306 aa2.79□□□□□ -1.96
NCDN-201ENST00000356090 KRTAP5-10Q6L8G5 202 aa2.69□□□□□ -1.98
NCDN-201ENST00000356090 KRTAP5-3Q6L8H2 238 aa2.69□□□□□ -1.98
NCDN-201ENST00000356090 KRTAP9-9Q9BYP9 154 aa2.68□□□□□ -1.98
NCDN-201ENST00000356090 KRTAP4-4Q9BYR3 166 aa2.54□□□□□ -2
NCDN-201ENST00000356090 KRTAP4-2Q9BYR5 136 aa2.54□□□□□ -2
NCDN-201ENST00000356090 KRTAP5-1Q6L8H4 278 aa2.5□□□□□ -2.01
NCDN-201ENST00000356090 LCE1CQ5T751 118 aa2.47□□□□□ -2.01
NCDN-201ENST00000356090 AHNAK2Q8IVF2 5795 aa2.43□□□□□ -2.02
NCDN-201ENST00000356090 MUC5BQ9HC84 5762 aaPredicted RBP2.42□□□□□ -2.02
NCDN-201ENST00000356090 KRTAP21-2Q3LI59 83 aa2.4□□□□□ -2.02
NCDN-201ENST00000356090 KRTAP5-8O75690 187 aa2.28□□□□□ -2.04
NCDN-201ENST00000356090 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.26□□□□□ -2.05
NCDN-201ENST00000356090 AHNAKQ09666 5890 aaKnown RBP2.22□□□□□ -2.05
NCDN-201ENST00000356090 KRTAP21-1Q3LI58 79 aa2.19□□□□□ -2.06
NCDN-201ENST00000356090 KRTAP5-7Q6L8G8 165 aa2.15□□□□□ -2.07
NCDN-201ENST00000356090 KRTAP5-11Q6L8G4 156 aa2.09□□□□□ -2.08
NCDN-201ENST00000356090 PHGR1C9JFL3 82 aa1.83□□□□□ -2.12
NCDN-201ENST00000356090 MUC16Q8WXI7 14507 aa1.26□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 569.3 ms