RNA–Protein interactions for RNA: ENST00000356025.7

SIRPA-201, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-201ENST00000356025 LOC100996750A0A140TA64 210 aa4.17□□□□□ -1.74
SIRPA-201ENST00000356025 MT1GP13640 62 aa4.17□□□□□ -1.74
SIRPA-201ENST00000356025 SPRR2FQ96RM1 72 aa4.15□□□□□ -1.75
SIRPA-201ENST00000356025 MT1LQ93083 61 aa4.15□□□□□ -1.75
SIRPA-201ENST00000356025 MT1EP04732 61 aa4.14□□□□□ -1.75
SIRPA-201ENST00000356025 SYNE2Q8WXH0 6885 aaKnown RBP4.08□□□□□ -1.76
SIRPA-201ENST00000356025 KRTAP19-6Q3LI70 58 aa3.98□□□□□ -1.77
SIRPA-201ENST00000356025 MACF1Q9UPN3 7388 aaKnown RBP3.96□□□□□ -1.78
SIRPA-201ENST00000356025 LCE3BQ5TA77 95 aa3.95□□□□□ -1.78
SIRPA-201ENST00000356025 KRTAP19-3Q7Z4W3 81 aa3.93□□□□□ -1.78
SIRPA-201ENST00000356025 LCE2DQ5TA82 110 aaPredicted RBP3.91□□□□□ -1.78
SIRPA-201ENST00000356025 MT1MQ8N339 61 aa3.91□□□□□ -1.78
SIRPA-201ENST00000356025 KRTAP2-3P0C7H8 128 aa3.89□□□□□ -1.79
SIRPA-201ENST00000356025 KRTAP2-4Q9BYR9 128 aa3.89□□□□□ -1.79
SIRPA-201ENST00000356025 KRTAP2-1Q9BYU5 128 aa3.89□□□□□ -1.79
SIRPA-201ENST00000356025 KRTAP12-4P60329 112 aa3.87□□□□□ -1.79
SIRPA-201ENST00000356025 KRTAP4-9Q9BYQ8 210 aa3.83□□□□□ -1.8
SIRPA-201ENST00000356025 MDN1Q9NU22 5596 aa3.81□□□□□ -1.8
SIRPA-201ENST00000356025 SPRR2EP22531 72 aa3.74□□□□□ -1.81
SIRPA-201ENST00000356025 SPRR2BP35325 72 aa3.74□□□□□ -1.81
SIRPA-201ENST00000356025 SPRR2AP35326 72 aa3.74□□□□□ -1.81
SIRPA-201ENST00000356025 KRTAP19-4Q3LI73 84 aa3.73□□□□□ -1.81
SIRPA-201ENST00000356025 KRTAP9-2Q9BYQ4 174 aa3.7□□□□□ -1.82
SIRPA-201ENST00000356025 LCE5AQ5TCM9 118 aa3.65□□□□□ -1.82
SIRPA-201ENST00000356025 KRTAP6-1Q3LI64 71 aa3.61□□□□□ -1.83
SIRPA-201ENST00000356025 SPRR2DP22532 72 aa3.55□□□□□ -1.84
SIRPA-201ENST00000356025 LCE3DQ9BYE3 92 aa3.55□□□□□ -1.84
SIRPA-201ENST00000356025 LCE1AQ5T7P2 110 aa3.52□□□□□ -1.85
SIRPA-201ENST00000356025 LCE3EQ5T5B0 92 aa3.46□□□□□ -1.85
SIRPA-201ENST00000356025 PRM1P04553 51 aa3.45□□□□□ -1.86
SIRPA-201ENST00000356025 KRTAP9-7A8MTY7 169 aa3.44□□□□□ -1.86
SIRPA-201ENST00000356025 MT1AP04731 61 aa3.44□□□□□ -1.86
SIRPA-201ENST00000356025 MT4P47944 62 aa3.33□□□□□ -1.88
SIRPA-201ENST00000356025 KRTAP6-2Q3LI66 62 aa3.32□□□□□ -1.88
SIRPA-201ENST00000356025 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.27□□□□□ -1.89
SIRPA-201ENST00000356025 KRTAP9-6A0A140TA67 174 aa3.26□□□□□ -1.89
SIRPA-201ENST00000356025 KRTAP5-9P26371 169 aa3.25□□□□□ -1.89
SIRPA-201ENST00000356025 KRTAP9-4Q9BYQ2 154 aa3.24□□□□□ -1.89
SIRPA-201ENST00000356025 MT3P25713 68 aa3.23□□□□□ -1.89
SIRPA-201ENST00000356025 KRTAP5-5Q701N2 237 aaPredicted RBP3.19□□□□□ -1.9
SIRPA-201ENST00000356025 KRTAP6-3Q3LI67 103 aa3.14□□□□□ -1.91
SIRPA-201ENST00000356025 KRTAP4-6Q9BYQ5 205 aa3.1□□□□□ -1.91
SIRPA-201ENST00000356025 LCE1DQ5T752 114 aa3.05□□□□□ -1.92
SIRPA-201ENST00000356025 NEBP20929 6669 aa3.04□□□□□ -1.92
SIRPA-201ENST00000356025 LCE1BQ5T7P3 118 aa3□□□□□ -1.93
SIRPA-201ENST00000356025 KRTAP2-2Q9BYT5 123 aa2.91□□□□□ -1.94
SIRPA-201ENST00000356025 HMCN1Q96RW7 5635 aa2.87□□□□□ -1.95
SIRPA-201ENST00000356025 MUC19Q7Z5P9 8384 aa2.85□□□□□ -1.95
SIRPA-201ENST00000356025 KRTAP20-2Q3LI61 65 aa2.84□□□□□ -1.95
SIRPA-201ENST00000356025 MUC5ACP98088 5654 aa2.79□□□□□ -1.96
SIRPA-201ENST00000356025 LCE4AQ5TA78 99 aa2.77□□□□□ -1.97
SIRPA-201ENST00000356025 KRTAP5-4Q6L8H1 288 aa2.73□□□□□ -1.97
SIRPA-201ENST00000356025 KRTAP20-1Q3LI63 56 aa2.72□□□□□ -1.97
SIRPA-201ENST00000356025 LCE1EQ5T753 118 aa2.71□□□□□ -1.98
SIRPA-201ENST00000356025 KRTAP4-11Q9BYQ6 195 aa2.67□□□□□ -1.98
SIRPA-201ENST00000356025 GPR98Q8WXG9 6306 aa2.59□□□□□ -1.99
SIRPA-201ENST00000356025 LCE1FQ5T754 118 aa2.52□□□□□ -2.01
SIRPA-201ENST00000356025 KRTAP5-2Q701N4 177 aa2.51□□□□□ -2.01
SIRPA-201ENST00000356025 KRTAP5-3Q6L8H2 238 aa2.5□□□□□ -2.01
SIRPA-201ENST00000356025 KRTAP4-4Q9BYR3 166 aa2.49□□□□□ -2.01
SIRPA-201ENST00000356025 AHNAK2Q8IVF2 5795 aa2.4□□□□□ -2.03
SIRPA-201ENST00000356025 KRTAP4-12Q9BQ66 201 aa2.38□□□□□ -2.03
SIRPA-201ENST00000356025 KRTAP4-2Q9BYR5 136 aa2.38□□□□□ -2.03
SIRPA-201ENST00000356025 MUC5BQ9HC84 5762 aaPredicted RBP2.37□□□□□ -2.03
SIRPA-201ENST00000356025 KRTAP5-10Q6L8G5 202 aa2.36□□□□□ -2.03
SIRPA-201ENST00000356025 KRTAP5-1Q6L8H4 278 aa2.26□□□□□ -2.05
SIRPA-201ENST00000356025 LCE1CQ5T751 118 aa2.24□□□□□ -2.05
SIRPA-201ENST00000356025 KRTAP5-8O75690 187 aa2.19□□□□□ -2.06
SIRPA-201ENST00000356025 KRTAP21-2Q3LI59 83 aa2.15□□□□□ -2.06
SIRPA-201ENST00000356025 KRTAP9-9Q9BYP9 154 aa2.1□□□□□ -2.07
SIRPA-201ENST00000356025 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.92□□□□□ -2.1
SIRPA-201ENST00000356025 KRTAP5-11Q6L8G4 156 aa1.9□□□□□ -2.1
SIRPA-201ENST00000356025 KRTAP21-1Q3LI58 79 aa1.89□□□□□ -2.11
SIRPA-201ENST00000356025 AHNAKQ09666 5890 aaKnown RBP1.88□□□□□ -2.11
SIRPA-201ENST00000356025 KRTAP5-7Q6L8G8 165 aa1.81□□□□□ -2.12
SIRPA-201ENST00000356025 PHGR1C9JFL3 82 aa1.68□□□□□ -2.14
SIRPA-201ENST00000356025 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 11.6 ms