RNA–Protein interactions for RNA: ENST00000355653.7

VAT1-201, Transcript of vesicle amine transport 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAT1, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-201ENST00000355653 KRTAP4-3Q9BYR4 195 aa4.96□□□□□ -1.61
VAT1-201ENST00000355653 CRCT1Q9UGL9 99 aa4.93□□□□□ -1.62
VAT1-201ENST00000355653 MT1GP13640 62 aa4.92□□□□□ -1.62
VAT1-201ENST00000355653 FCGBPQ9Y6R7 5405 aaPredicted RBP4.88□□□□□ -1.63
VAT1-201ENST00000355653 KRTAP12-4P60329 112 aa4.88□□□□□ -1.63
VAT1-201ENST00000355653 KRTAP19-6Q3LI70 58 aa4.87□□□□□ -1.63
VAT1-201ENST00000355653 MUC12Q9UKN1 5478 aa4.87□□□□□ -1.63
VAT1-201ENST00000355653 DSTQ03001 7570 aaKnown RBP4.81□□□□□ -1.64
VAT1-201ENST00000355653 LCE2DQ5TA82 110 aaPredicted RBP4.8□□□□□ -1.64
VAT1-201ENST00000355653 MT1MQ8N339 61 aa4.74□□□□□ -1.65
VAT1-201ENST00000355653 KRTAP19-3Q7Z4W3 81 aa4.7□□□□□ -1.66
VAT1-201ENST00000355653 LCE3BQ5TA77 95 aa4.66□□□□□ -1.66
VAT1-201ENST00000355653 KRTAP4-9Q9BYQ8 210 aa4.63□□□□□ -1.67
VAT1-201ENST00000355653 SYNE1Q8NF91 8797 aaKnown RBP4.57□□□□□ -1.68
VAT1-201ENST00000355653 SPRR2FQ96RM1 72 aa4.55□□□□□ -1.68
VAT1-201ENST00000355653 OBSCNQ5VST9 7968 aa4.54□□□□□ -1.68
VAT1-201ENST00000355653 LCE5AQ5TCM9 118 aa4.52□□□□□ -1.69
VAT1-201ENST00000355653 MACF1Q9UPN3 7388 aaKnown RBP4.5□□□□□ -1.69
VAT1-201ENST00000355653 KRTAP9-2Q9BYQ4 174 aa4.45□□□□□ -1.7
VAT1-201ENST00000355653 KRTAP6-1Q3LI64 71 aa4.41□□□□□ -1.7
VAT1-201ENST00000355653 LCE3DQ9BYE3 92 aa4.41□□□□□ -1.7
VAT1-201ENST00000355653 KRTAP9-7A8MTY7 169 aa4.4□□□□□ -1.71
VAT1-201ENST00000355653 MT1AP04731 61 aa4.4□□□□□ -1.71
VAT1-201ENST00000355653 SYNE2Q8WXH0 6885 aaKnown RBP4.38□□□□□ -1.71
VAT1-201ENST00000355653 MDN1Q9NU22 5596 aa4.37□□□□□ -1.71
VAT1-201ENST00000355653 PRM1P04553 51 aa4.37□□□□□ -1.71
VAT1-201ENST00000355653 LCE3EQ5T5B0 92 aa4.36□□□□□ -1.71
VAT1-201ENST00000355653 KRTAP5-5Q701N2 237 aaPredicted RBP4.32□□□□□ -1.72
VAT1-201ENST00000355653 LCE1AQ5T7P2 110 aa4.2□□□□□ -1.74
VAT1-201ENST00000355653 KRTAP6-3Q3LI67 103 aa4.19□□□□□ -1.74
VAT1-201ENST00000355653 KRTAP2-2Q9BYT5 123 aa4.14□□□□□ -1.75
VAT1-201ENST00000355653 KRTAP6-2Q3LI66 62 aa4.13□□□□□ -1.75
VAT1-201ENST00000355653 KRTAP9-6A0A140TA67 174 aa4.12□□□□□ -1.75
VAT1-201ENST00000355653 SPRR2EP22531 72 aa4.1□□□□□ -1.75
VAT1-201ENST00000355653 KRTAP5-9P26371 169 aa4.1□□□□□ -1.75
VAT1-201ENST00000355653 SPRR2BP35325 72 aa4.1□□□□□ -1.75
VAT1-201ENST00000355653 SPRR2AP35326 72 aa4.1□□□□□ -1.75
VAT1-201ENST00000355653 KRTAP9-4Q9BYQ2 154 aa4.01□□□□□ -1.77
VAT1-201ENST00000355653 SPRR2DP22532 72 aa3.9□□□□□ -1.78
VAT1-201ENST00000355653 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.88□□□□□ -1.79
VAT1-201ENST00000355653 LCE1EQ5T753 118 aa3.85□□□□□ -1.79
VAT1-201ENST00000355653 MT3P25713 68 aa3.84□□□□□ -1.8
VAT1-201ENST00000355653 LCE1DQ5T752 114 aa3.7□□□□□ -1.82
VAT1-201ENST00000355653 NEBP20929 6669 aa3.65□□□□□ -1.83
VAT1-201ENST00000355653 KRTAP5-4Q6L8H1 288 aa3.57□□□□□ -1.84
VAT1-201ENST00000355653 KRTAP4-6Q9BYQ5 205 aa3.55□□□□□ -1.84
VAT1-201ENST00000355653 MT4P47944 62 aa3.51□□□□□ -1.85
VAT1-201ENST00000355653 KRTAP20-2Q3LI61 65 aa3.4□□□□□ -1.87
VAT1-201ENST00000355653 MUC5ACP98088 5654 aa3.38□□□□□ -1.87
VAT1-201ENST00000355653 KRTAP5-2Q701N4 177 aa3.35□□□□□ -1.87
VAT1-201ENST00000355653 HMCN1Q96RW7 5635 aa3.32□□□□□ -1.88
VAT1-201ENST00000355653 LCE4AQ5TA78 99 aa3.3□□□□□ -1.88
VAT1-201ENST00000355653 KRTAP4-11Q9BYQ6 195 aa3.29□□□□□ -1.88
VAT1-201ENST00000355653 LCE1FQ5T754 118 aa3.23□□□□□ -1.89
VAT1-201ENST00000355653 KRTAP5-3Q6L8H2 238 aa3.21□□□□□ -1.89
VAT1-201ENST00000355653 KRTAP20-1Q3LI63 56 aa3.19□□□□□ -1.9
VAT1-201ENST00000355653 LCE1BQ5T7P3 118 aa3.18□□□□□ -1.9
VAT1-201ENST00000355653 KRTAP5-10Q6L8G5 202 aa3.15□□□□□ -1.91
VAT1-201ENST00000355653 KRTAP5-1Q6L8H4 278 aa3.01□□□□□ -1.93
VAT1-201ENST00000355653 MUC19Q7Z5P9 8384 aa2.94□□□□□ -1.94
VAT1-201ENST00000355653 KRTAP4-2Q9BYR5 136 aa2.94□□□□□ -1.94
VAT1-201ENST00000355653 LCE1CQ5T751 118 aa2.88□□□□□ -1.95
VAT1-201ENST00000355653 KRTAP21-2Q3LI59 83 aa2.79□□□□□ -1.96
VAT1-201ENST00000355653 AHNAK2Q8IVF2 5795 aa2.74□□□□□ -1.97
VAT1-201ENST00000355653 KRTAP4-4Q9BYR3 166 aa2.71□□□□□ -1.98
VAT1-201ENST00000355653 KRTAP21-1Q3LI58 79 aa2.69□□□□□ -1.98
VAT1-201ENST00000355653 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.69□□□□□ -1.98
VAT1-201ENST00000355653 KRTAP5-8O75690 187 aa2.66□□□□□ -1.98
VAT1-201ENST00000355653 MUC5BQ9HC84 5762 aaPredicted RBP2.57□□□□□ -2
VAT1-201ENST00000355653 KRTAP5-7Q6L8G8 165 aa2.55□□□□□ -2
VAT1-201ENST00000355653 GPR98Q8WXG9 6306 aa2.51□□□□□ -2.01
VAT1-201ENST00000355653 KRTAP5-11Q6L8G4 156 aa2.46□□□□□ -2.02
VAT1-201ENST00000355653 KRTAP4-12Q9BQ66 201 aa2.46□□□□□ -2.02
VAT1-201ENST00000355653 KRTAP9-9Q9BYP9 154 aa2.24□□□□□ -2.05
VAT1-201ENST00000355653 PHGR1C9JFL3 82 aa2.14□□□□□ -2.07
VAT1-201ENST00000355653 AHNAKQ09666 5890 aaKnown RBP2.05□□□□□ -2.08
VAT1-201ENST00000355653 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 9.7 ms