RNA–Protein interactions for RNA: ENST00000355547.9

PDZD3-202, Transcript of PDZ domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD3, Length 2,252 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-202ENST00000355547 KRTAP4-7Q9BYR0 210 aa6.27□□□□□ -1.41
PDZD3-202ENST00000355547 KRTAP2-4Q9BYR9 128 aa6.27□□□□□ -1.41
PDZD3-202ENST00000355547 KRTAP2-1Q9BYU5 128 aa6.27□□□□□ -1.41
PDZD3-202ENST00000355547 MACF1Q9UPN3 7388 aaKnown RBP6.26□□□□□ -1.41
PDZD3-202ENST00000355547 MT1LQ93083 61 aa6.25□□□□□ -1.41
PDZD3-202ENST00000355547 MT1EP04732 61 aa6.24□□□□□ -1.41
PDZD3-202ENST00000355547 SYNE2Q8WXH0 6885 aaKnown RBP6.14□□□□□ -1.43
PDZD3-202ENST00000355547 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.1□□□□□ -1.43
PDZD3-202ENST00000355547 KRTAP9-7A8MTY7 169 aa5.96□□□□□ -1.45
PDZD3-202ENST00000355547 MUC12Q9UKN1 5478 aa5.88□□□□□ -1.47
PDZD3-202ENST00000355547 KRTAP4-3Q9BYR4 195 aa5.85□□□□□ -1.47
PDZD3-202ENST00000355547 LOC100996750A0A140TA64 210 aa5.84□□□□□ -1.47
PDZD3-202ENST00000355547 SPRR2FQ96RM1 72 aa5.83□□□□□ -1.48
PDZD3-202ENST00000355547 KRTAP6-3Q3LI67 103 aa5.82□□□□□ -1.48
PDZD3-202ENST00000355547 MT1MQ8N339 61 aa5.82□□□□□ -1.48
PDZD3-202ENST00000355547 MT1GP13640 62 aa5.81□□□□□ -1.48
PDZD3-202ENST00000355547 KRTAP19-3Q7Z4W3 81 aa5.81□□□□□ -1.48
PDZD3-202ENST00000355547 KRTAP5-9P26371 169 aa5.8□□□□□ -1.48
PDZD3-202ENST00000355547 MDN1Q9NU22 5596 aa5.78□□□□□ -1.48
PDZD3-202ENST00000355547 LCE5AQ5TCM9 118 aa5.62□□□□□ -1.51
PDZD3-202ENST00000355547 LCE1AQ5T7P2 110 aa5.59□□□□□ -1.51
PDZD3-202ENST00000355547 SPRR2EP22531 72 aa5.59□□□□□ -1.51
PDZD3-202ENST00000355547 SPRR2BP35325 72 aa5.59□□□□□ -1.51
PDZD3-202ENST00000355547 SPRR2AP35326 72 aa5.59□□□□□ -1.51
PDZD3-202ENST00000355547 KRTAP12-4P60329 112 aa5.52□□□□□ -1.53
PDZD3-202ENST00000355547 NEBP20929 6669 aa5.51□□□□□ -1.53
PDZD3-202ENST00000355547 DSTQ03001 7570 aaKnown RBP5.45□□□□□ -1.54
PDZD3-202ENST00000355547 SPRR2DP22532 72 aa5.38□□□□□ -1.55
PDZD3-202ENST00000355547 LCE3BQ5TA77 95 aa5.36□□□□□ -1.55
PDZD3-202ENST00000355547 MT1AP04731 61 aa5.34□□□□□ -1.56
PDZD3-202ENST00000355547 KRTAP6-1Q3LI64 71 aa5.28□□□□□ -1.56
PDZD3-202ENST00000355547 KRTAP4-9Q9BYQ8 210 aa5.26□□□□□ -1.57
PDZD3-202ENST00000355547 KRTAP20-1Q3LI63 56 aa5.19□□□□□ -1.58
PDZD3-202ENST00000355547 KRTAP5-5Q701N2 237 aaPredicted RBP5.16□□□□□ -1.58
PDZD3-202ENST00000355547 LCE3DQ9BYE3 92 aa5.13□□□□□ -1.59
PDZD3-202ENST00000355547 SYNE1Q8NF91 8797 aaKnown RBP5.13□□□□□ -1.59
PDZD3-202ENST00000355547 LCE3EQ5T5B0 92 aa5.08□□□□□ -1.6
PDZD3-202ENST00000355547 KRTAP2-2Q9BYT5 123 aa5.02□□□□□ -1.61
PDZD3-202ENST00000355547 PRM1P04553 51 aa4.95□□□□□ -1.62
PDZD3-202ENST00000355547 KRTAP9-4Q9BYQ2 154 aa4.94□□□□□ -1.62
PDZD3-202ENST00000355547 KRTAP5-4Q6L8H1 288 aa4.77□□□□□ -1.65
PDZD3-202ENST00000355547 MT4P47944 62 aa4.74□□□□□ -1.65
PDZD3-202ENST00000355547 GPR98Q8WXG9 6306 aa4.73□□□□□ -1.65
PDZD3-202ENST00000355547 KRTAP6-2Q3LI66 62 aa4.72□□□□□ -1.65
PDZD3-202ENST00000355547 MT3P25713 68 aa4.71□□□□□ -1.66
PDZD3-202ENST00000355547 LCE4AQ5TA78 99 aa4.71□□□□□ -1.66
PDZD3-202ENST00000355547 LCE1DQ5T752 114 aa4.67□□□□□ -1.66
PDZD3-202ENST00000355547 KRTAP4-6Q9BYQ5 205 aa4.67□□□□□ -1.66
PDZD3-202ENST00000355547 HMCN1Q96RW7 5635 aa4.65□□□□□ -1.66
PDZD3-202ENST00000355547 KRTAP20-2Q3LI61 65 aa4.5□□□□□ -1.69
PDZD3-202ENST00000355547 OBSCNQ5VST9 7968 aa4.48□□□□□ -1.69
PDZD3-202ENST00000355547 KRTAP5-3Q6L8H2 238 aa4.34□□□□□ -1.71
PDZD3-202ENST00000355547 KRTAP5-2Q701N4 177 aa4.28□□□□□ -1.72
PDZD3-202ENST00000355547 AHNAK2Q8IVF2 5795 aa4.21□□□□□ -1.74
PDZD3-202ENST00000355547 LCE1EQ5T753 118 aa4.06□□□□□ -1.76
PDZD3-202ENST00000355547 KRTAP5-10Q6L8G5 202 aa4.06□□□□□ -1.76
PDZD3-202ENST00000355547 KRTAP5-7Q6L8G8 165 aa4□□□□□ -1.77
PDZD3-202ENST00000355547 KRTAP4-11Q9BYQ6 195 aa3.98□□□□□ -1.77
PDZD3-202ENST00000355547 MUC5ACP98088 5654 aa3.92□□□□□ -1.78
PDZD3-202ENST00000355547 KRTAP5-8O75690 187 aa3.83□□□□□ -1.8
PDZD3-202ENST00000355547 KRTAP5-1Q6L8H4 278 aa3.78□□□□□ -1.8
PDZD3-202ENST00000355547 LCE1BQ5T7P3 118 aa3.72□□□□□ -1.81
PDZD3-202ENST00000355547 LCE1CQ5T751 118 aa3.64□□□□□ -1.83
PDZD3-202ENST00000355547 KRTAP4-2Q9BYR5 136 aa3.64□□□□□ -1.83
PDZD3-202ENST00000355547 AHNAKQ09666 5890 aaKnown RBP3.61□□□□□ -1.83
PDZD3-202ENST00000355547 KRTAP9-9Q9BYP9 154 aa3.5□□□□□ -1.85
PDZD3-202ENST00000355547 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.47□□□□□ -1.85
PDZD3-202ENST00000355547 KRTAP21-2Q3LI59 83 aa3.44□□□□□ -1.86
PDZD3-202ENST00000355547 MUC5BQ9HC84 5762 aaPredicted RBP3.43□□□□□ -1.86
PDZD3-202ENST00000355547 KRTAP21-1Q3LI58 79 aa3.24□□□□□ -1.89
PDZD3-202ENST00000355547 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
PDZD3-202ENST00000355547 KRTAP5-11Q6L8G4 156 aa3.12□□□□□ -1.91
PDZD3-202ENST00000355547 KRTAP4-12Q9BQ66 201 aa3.1□□□□□ -1.91
PDZD3-202ENST00000355547 KRTAP4-4Q9BYR3 166 aa3.06□□□□□ -1.92
PDZD3-202ENST00000355547 MUC19Q7Z5P9 8384 aa2.84□□□□□ -1.95
PDZD3-202ENST00000355547 PHGR1C9JFL3 82 aa2.69□□□□□ -1.98
PDZD3-202ENST00000355547 MUC16Q8WXI7 14507 aa1.83□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 53.8 ms