RNA–Protein interactions for RNA: ENST00000355522.5

C2CD4A-201, Transcript of C2 calcium dependent domain containing 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2CD4A, Length 3,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD4A-201ENST00000355522 KRTAP2-4Q9BYR9 128 aa5.51□□□□□ -1.53
C2CD4A-201ENST00000355522 KRTAP2-1Q9BYU5 128 aa5.51□□□□□ -1.53
C2CD4A-201ENST00000355522 KRTAP19-7Q3SYF9 63 aa5.51□□□□□ -1.53
C2CD4A-201ENST00000355522 LCE2AQ5TA79 106 aaPredicted RBP5.48□□□□□ -1.53
C2CD4A-201ENST00000355522 SYNE2Q8WXH0 6885 aaKnown RBP5.48□□□□□ -1.53
C2CD4A-201ENST00000355522 KRTAP12-4P60329 112 aa5.41□□□□□ -1.54
C2CD4A-201ENST00000355522 MT1GP13640 62 aa5.39□□□□□ -1.55
C2CD4A-201ENST00000355522 MT1LQ93083 61 aa5.36□□□□□ -1.55
C2CD4A-201ENST00000355522 MT1EP04732 61 aa5.32□□□□□ -1.56
C2CD4A-201ENST00000355522 MACF1Q9UPN3 7388 aaKnown RBP5.28□□□□□ -1.56
C2CD4A-201ENST00000355522 MDN1Q9NU22 5596 aa5.2□□□□□ -1.58
C2CD4A-201ENST00000355522 SPRR2FQ96RM1 72 aa5.17□□□□□ -1.58
C2CD4A-201ENST00000355522 LCE3BQ5TA77 95 aa5.16□□□□□ -1.58
C2CD4A-201ENST00000355522 KRTAP4-9Q9BYQ8 210 aa5.14□□□□□ -1.59
C2CD4A-201ENST00000355522 LCE2DQ5TA82 110 aaPredicted RBP5.13□□□□□ -1.59
C2CD4A-201ENST00000355522 KRTAP19-4Q3LI73 84 aa5.03□□□□□ -1.6
C2CD4A-201ENST00000355522 MT1MQ8N339 61 aa5.01□□□□□ -1.61
C2CD4A-201ENST00000355522 KRTAP19-3Q7Z4W3 81 aa4.96□□□□□ -1.62
C2CD4A-201ENST00000355522 KRTAP19-6Q3LI70 58 aa4.95□□□□□ -1.62
C2CD4A-201ENST00000355522 PRM1P04553 51 aa4.84□□□□□ -1.63
C2CD4A-201ENST00000355522 LCE3DQ9BYE3 92 aa4.82□□□□□ -1.64
C2CD4A-201ENST00000355522 KRTAP9-7A8MTY7 169 aa4.81□□□□□ -1.64
C2CD4A-201ENST00000355522 LCE3EQ5T5B0 92 aa4.75□□□□□ -1.65
C2CD4A-201ENST00000355522 KRTAP9-2Q9BYQ4 174 aa4.75□□□□□ -1.65
C2CD4A-201ENST00000355522 KRTAP6-1Q3LI64 71 aa4.71□□□□□ -1.65
C2CD4A-201ENST00000355522 LCE5AQ5TCM9 118 aa4.68□□□□□ -1.66
C2CD4A-201ENST00000355522 SPRR2EP22531 72 aa4.64□□□□□ -1.67
C2CD4A-201ENST00000355522 SPRR2BP35325 72 aa4.64□□□□□ -1.67
C2CD4A-201ENST00000355522 SPRR2AP35326 72 aa4.64□□□□□ -1.67
C2CD4A-201ENST00000355522 MT1AP04731 61 aa4.52□□□□□ -1.69
C2CD4A-201ENST00000355522 KRTAP5-5Q701N2 237 aaPredicted RBP4.5□□□□□ -1.69
C2CD4A-201ENST00000355522 KRTAP6-2Q3LI66 62 aa4.47□□□□□ -1.69
C2CD4A-201ENST00000355522 LCE1AQ5T7P2 110 aa4.44□□□□□ -1.7
C2CD4A-201ENST00000355522 SPRR2DP22532 72 aa4.39□□□□□ -1.71
C2CD4A-201ENST00000355522 KRTAP9-6A0A140TA67 174 aa4.3□□□□□ -1.72
C2CD4A-201ENST00000355522 KRTAP6-3Q3LI67 103 aa4.24□□□□□ -1.73
C2CD4A-201ENST00000355522 MT4P47944 62 aa4.21□□□□□ -1.73
C2CD4A-201ENST00000355522 KRTAP2-2Q9BYT5 123 aa4.16□□□□□ -1.74
C2CD4A-201ENST00000355522 KRTAP9-4Q9BYQ2 154 aa4.14□□□□□ -1.75
C2CD4A-201ENST00000355522 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.13□□□□□ -1.75
C2CD4A-201ENST00000355522 MT3P25713 68 aa4.09□□□□□ -1.76
C2CD4A-201ENST00000355522 KRTAP5-9P26371 169 aa4.06□□□□□ -1.76
C2CD4A-201ENST00000355522 NEBP20929 6669 aa4□□□□□ -1.77
C2CD4A-201ENST00000355522 KRTAP4-6Q9BYQ5 205 aa3.98□□□□□ -1.77
C2CD4A-201ENST00000355522 LCE1EQ5T753 118 aa3.96□□□□□ -1.78
C2CD4A-201ENST00000355522 MUC19Q7Z5P9 8384 aa3.9□□□□□ -1.79
C2CD4A-201ENST00000355522 LCE1DQ5T752 114 aa3.81□□□□□ -1.8
C2CD4A-201ENST00000355522 HMCN1Q96RW7 5635 aa3.81□□□□□ -1.8
C2CD4A-201ENST00000355522 LCE1BQ5T7P3 118 aa3.74□□□□□ -1.81
C2CD4A-201ENST00000355522 KRTAP4-11Q9BYQ6 195 aa3.7□□□□□ -1.82
C2CD4A-201ENST00000355522 MUC5ACP98088 5654 aa3.67□□□□□ -1.82
C2CD4A-201ENST00000355522 KRTAP20-2Q3LI61 65 aa3.57□□□□□ -1.84
C2CD4A-201ENST00000355522 KRTAP5-4Q6L8H1 288 aa3.47□□□□□ -1.85
C2CD4A-201ENST00000355522 KRTAP20-1Q3LI63 56 aa3.35□□□□□ -1.87
C2CD4A-201ENST00000355522 LCE4AQ5TA78 99 aa3.32□□□□□ -1.88
C2CD4A-201ENST00000355522 KRTAP4-4Q9BYR3 166 aa3.26□□□□□ -1.89
C2CD4A-201ENST00000355522 KRTAP5-10Q6L8G5 202 aa3.24□□□□□ -1.89
C2CD4A-201ENST00000355522 KRTAP5-2Q701N4 177 aa3.23□□□□□ -1.89
C2CD4A-201ENST00000355522 MUC5BQ9HC84 5762 aaPredicted RBP3.23□□□□□ -1.89
C2CD4A-201ENST00000355522 KRTAP5-3Q6L8H2 238 aa3.2□□□□□ -1.9
C2CD4A-201ENST00000355522 LCE1FQ5T754 118 aa3.16□□□□□ -1.9
C2CD4A-201ENST00000355522 AHNAK2Q8IVF2 5795 aa3.14□□□□□ -1.91
C2CD4A-201ENST00000355522 KRTAP4-12Q9BQ66 201 aa3.07□□□□□ -1.92
C2CD4A-201ENST00000355522 KRTAP4-2Q9BYR5 136 aa3.07□□□□□ -1.92
C2CD4A-201ENST00000355522 KRTAP9-9Q9BYP9 154 aa2.96□□□□□ -1.94
C2CD4A-201ENST00000355522 KRTAP5-1Q6L8H4 278 aa2.93□□□□□ -1.94
C2CD4A-201ENST00000355522 GPR98Q8WXG9 6306 aa2.9□□□□□ -1.95
C2CD4A-201ENST00000355522 KRTAP21-2Q3LI59 83 aa2.85□□□□□ -1.95
C2CD4A-201ENST00000355522 LCE1CQ5T751 118 aa2.83□□□□□ -1.96
C2CD4A-201ENST00000355522 KRTAP5-8O75690 187 aa2.79□□□□□ -1.96
C2CD4A-201ENST00000355522 KRTAP21-1Q3LI58 79 aa2.76□□□□□ -1.97
C2CD4A-201ENST00000355522 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.49□□□□□ -2.01
C2CD4A-201ENST00000355522 KRTAP5-7Q6L8G8 165 aa2.45□□□□□ -2.02
C2CD4A-201ENST00000355522 AHNAKQ09666 5890 aaKnown RBP2.4□□□□□ -2.03
C2CD4A-201ENST00000355522 KRTAP5-11Q6L8G4 156 aa2.38□□□□□ -2.03
C2CD4A-201ENST00000355522 PHGR1C9JFL3 82 aa2.14□□□□□ -2.07
C2CD4A-201ENST00000355522 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 63.2 ms