RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 KRTAP19-3Q7Z4W3 81 aa5.96□□□□□ -1.46
VPS13B-201ENST00000355155 MT1GP13640 62 aa5.93□□□□□ -1.46
VPS13B-201ENST00000355155 LCE5AQ5TCM9 118 aa5.88□□□□□ -1.47
VPS13B-201ENST00000355155 SPRR2FQ96RM1 72 aa5.87□□□□□ -1.47
VPS13B-201ENST00000355155 MT1MQ8N339 61 aa5.85□□□□□ -1.47
VPS13B-201ENST00000355155 MACF1Q9UPN3 7388 aaKnown RBP5.83□□□□□ -1.48
VPS13B-201ENST00000355155 KRTAP4-7Q9BYR0 210 aa5.82□□□□□ -1.48
VPS13B-201ENST00000355155 KRTAP9-6A8MVA2 160 aa5.79□□□□□ -1.48
VPS13B-201ENST00000355155 KRTAP6-3Q3LI67 103 aa5.76□□□□□ -1.49
VPS13B-201ENST00000355155 LCE1AQ5T7P2 110 aa5.71□□□□□ -1.49
VPS13B-201ENST00000355155 MUC12Q9UKN1 5478 aa5.66□□□□□ -1.5
VPS13B-201ENST00000355155 KRTAP4-3Q9BYR4 195 aa5.63□□□□□ -1.51
VPS13B-201ENST00000355155 SPRR2EP22531 72 aa5.56□□□□□ -1.52
VPS13B-201ENST00000355155 SPRR2BP35325 72 aa5.56□□□□□ -1.52
VPS13B-201ENST00000355155 SPRR2AP35326 72 aa5.56□□□□□ -1.52
VPS13B-201ENST00000355155 SYNE2Q8WXH0 6885 aaKnown RBP5.55□□□□□ -1.52
VPS13B-201ENST00000355155 KRTAP2-3P0C7H8 128 aa5.52□□□□□ -1.53
VPS13B-201ENST00000355155 KRTAP2-4Q9BYR9 128 aa5.52□□□□□ -1.53
VPS13B-201ENST00000355155 KRTAP2-1Q9BYU5 128 aa5.52□□□□□ -1.53
VPS13B-201ENST00000355155 LOC100996750A0A140TA64 210 aa5.47□□□□□ -1.53
VPS13B-201ENST00000355155 H3BS24 57 aa5.45□□□□□ -1.54
VPS13B-201ENST00000355155 NEBP20929 6669 aa5.44□□□□□ -1.54
VPS13B-201ENST00000355155 MDN1Q9NU22 5596 aa5.42□□□□□ -1.54
VPS13B-201ENST00000355155 KRTAP20-1Q3LI63 56 aa5.4□□□□□ -1.54
VPS13B-201ENST00000355155 KRTAP5-5Q701N2 237 aaPredicted RBP5.37□□□□□ -1.55
VPS13B-201ENST00000355155 SPRR2DP22532 72 aa5.36□□□□□ -1.55
VPS13B-201ENST00000355155 A0A0A0MQY5 61 aa5.33□□□□□ -1.56
VPS13B-201ENST00000355155 MT1AP04731 61 aa5.24□□□□□ -1.57
VPS13B-201ENST00000355155 LCE3BQ5TA77 95 aa5.16□□□□□ -1.58
VPS13B-201ENST00000355155 KRTAP6-1Q3LI64 71 aa5.12□□□□□ -1.59
VPS13B-201ENST00000355155 INE1O15225 51 aa5.11□□□□□ -1.59
VPS13B-201ENST00000355155 KRTAP5-4Q6L8H1 288 aa5.07□□□□□ -1.6
VPS13B-201ENST00000355155 DSTQ03001 7570 aaKnown RBP5.05□□□□□ -1.6
VPS13B-201ENST00000355155 KRTAP2-2Q9BYT5 123 aa5.04□□□□□ -1.6
VPS13B-201ENST00000355155 KRTAP9-4Q9BYQ2 154 aa4.97□□□□□ -1.61
VPS13B-201ENST00000355155 LCE4AQ5TA78 99 aa4.9□□□□□ -1.63
VPS13B-201ENST00000355155 KRTAP12-4P60329 112 aa4.8□□□□□ -1.64
VPS13B-201ENST00000355155 SYNE1Q8NF91 8797 aaKnown RBP4.77□□□□□ -1.65
VPS13B-201ENST00000355155 MT3P25713 68 aa4.71□□□□□ -1.66
VPS13B-201ENST00000355155 KRTAP6-2Q3LI66 62 aa4.66□□□□□ -1.66
VPS13B-201ENST00000355155 KRTAP5-2Q701N4 177 aa4.64□□□□□ -1.67
VPS13B-201ENST00000355155 KRTAP4-9Q9BYQ8 210 aa4.64□□□□□ -1.67
VPS13B-201ENST00000355155 KRTAP20-2Q3LI61 65 aa4.64□□□□□ -1.67
VPS13B-201ENST00000355155 KRTAP4-6Q9BYQ5 205 aa4.63□□□□□ -1.67
VPS13B-201ENST00000355155 LCE3DQ9BYE3 92 aa4.59□□□□□ -1.68
VPS13B-201ENST00000355155 MT4P47944 62 aa4.56□□□□□ -1.68
VPS13B-201ENST00000355155 LCE1DQ5T752 114 aa4.56□□□□□ -1.68
VPS13B-201ENST00000355155 GPR98Q8WXG9 6306 aa4.54□□□□□ -1.68
VPS13B-201ENST00000355155 KRTAP5-3Q6L8H2 238 aa4.53□□□□□ -1.68
VPS13B-201ENST00000355155 LCE3EQ5T5B0 92 aa4.5□□□□□ -1.69
VPS13B-201ENST00000355155 HMCN1Q96RW7 5635 aa4.41□□□□□ -1.7
VPS13B-201ENST00000355155 AHNAK2Q8IVF2 5795 aa4.22□□□□□ -1.73
VPS13B-201ENST00000355155 KRTAP5-10Q6L8G5 202 aa4.22□□□□□ -1.73
VPS13B-201ENST00000355155 LCE1EQ5T753 118 aa4.15□□□□□ -1.74
VPS13B-201ENST00000355155 KRTAP5-7Q6L8G8 165 aa4.14□□□□□ -1.75
VPS13B-201ENST00000355155 OBSCNQ5VST9 7968 aa4.02□□□□□ -1.77
VPS13B-201ENST00000355155 KRTAP4-11Q9BYQ6 195 aa3.95□□□□□ -1.78
VPS13B-201ENST00000355155 KRTAP5-1Q6L8H4 278 aa3.94□□□□□ -1.78
VPS13B-201ENST00000355155 PRM1P04553 51 aa3.94□□□□□ -1.78
VPS13B-201ENST00000355155 KRTAP5-8O75690 187 aa3.87□□□□□ -1.79
VPS13B-201ENST00000355155 LCE1CQ5T751 118 aa3.85□□□□□ -1.79
VPS13B-201ENST00000355155 LCE1BQ5T7P3 118 aa3.85□□□□□ -1.79
VPS13B-201ENST00000355155 KRTAP4-2Q9BYR5 136 aa3.82□□□□□ -1.8
VPS13B-201ENST00000355155 MUC5ACP98088 5654 aa3.74□□□□□ -1.81
VPS13B-201ENST00000355155 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.69□□□□□ -1.82
VPS13B-201ENST00000355155 AHNAKQ09666 5890 aaKnown RBP3.62□□□□□ -1.83
VPS13B-201ENST00000355155 KRTAP9-9Q9BYP9 154 aa3.49□□□□□ -1.85
VPS13B-201ENST00000355155 MUC5BQ9HC84 5762 aaPredicted RBP3.43□□□□□ -1.86
VPS13B-201ENST00000355155 KRTAP21-2Q3LI59 83 aa3.41□□□□□ -1.86
VPS13B-201ENST00000355155 KRTAP5-11Q6L8G4 156 aa3.4□□□□□ -1.87
VPS13B-201ENST00000355155 LCE1FQ5T754 118 aa3.06□□□□□ -1.92
VPS13B-201ENST00000355155 KRTAP4-12Q9BQ66 201 aa2.94□□□□□ -1.94
VPS13B-201ENST00000355155 PHGR1C9JFL3 82 aa2.89□□□□□ -1.95
VPS13B-201ENST00000355155 KRTAP4-4Q9BYR3 166 aa2.83□□□□□ -1.96
VPS13B-201ENST00000355155 KRTAP21-1Q3LI58 79 aa2.55□□□□□ -2
VPS13B-201ENST00000355155 MUC19Q7Z5P9 8384 aa2.17□□□□□ -2.06
VPS13B-201ENST00000355155 MUC16Q8WXI7 14507 aa1.96□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 10 ms