RNA–Protein interactions for RNA: ENST00000349736.9

CSNK2A1-202, Transcript of casein kinase 2 alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK2A1, Length 4,299 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-202ENST00000349736 MT1GP13640 62 aa3.32□□□□□ -1.88
CSNK2A1-202ENST00000349736 LOC100996750A0A140TA64 210 aa3.29□□□□□ -1.88
CSNK2A1-202ENST00000349736 KRTAP9-6A0A140TA67 174 aa3.29□□□□□ -1.88
CSNK2A1-202ENST00000349736 MACF1Q9UPN3 7388 aaKnown RBP3.27□□□□□ -1.89
CSNK2A1-202ENST00000349736 KRTAP19-7Q3SYF9 63 aa3.26□□□□□ -1.89
CSNK2A1-202ENST00000349736 INE1O15225 51 aa3.23□□□□□ -1.89
CSNK2A1-202ENST00000349736 MT1EP04732 61 aa3.22□□□□□ -1.89
CSNK2A1-202ENST00000349736 MT1LQ93083 61 aa3.22□□□□□ -1.89
CSNK2A1-202ENST00000349736 KRTAP9-6A8MVA2 160 aa3.21□□□□□ -1.9
CSNK2A1-202ENST00000349736 LCE3BQ5TA77 95 aa3.15□□□□□ -1.9
CSNK2A1-202ENST00000349736 KRTAP19-6Q3LI70 58 aa3.15□□□□□ -1.91
CSNK2A1-202ENST00000349736 KRTAP9-2Q9BYQ4 174 aa3.13□□□□□ -1.91
CSNK2A1-202ENST00000349736 KRTAP19-3Q7Z4W3 81 aa3.1□□□□□ -1.91
CSNK2A1-202ENST00000349736 MDN1Q9NU22 5596 aa3.09□□□□□ -1.91
CSNK2A1-202ENST00000349736 SPRR2EP22531 72 aa3.09□□□□□ -1.92
CSNK2A1-202ENST00000349736 SPRR2BP35325 72 aa3.09□□□□□ -1.92
CSNK2A1-202ENST00000349736 SPRR2AP35326 72 aa3.09□□□□□ -1.92
CSNK2A1-202ENST00000349736 MT1MQ8N339 61 aa3.07□□□□□ -1.92
CSNK2A1-202ENST00000349736 KRTAP4-9Q9BYQ8 210 aa3.03□□□□□ -1.92
CSNK2A1-202ENST00000349736 KRTAP12-4P60329 112 aa2.98□□□□□ -1.93
CSNK2A1-202ENST00000349736 SPRR2DP22532 72 aa2.93□□□□□ -1.94
CSNK2A1-202ENST00000349736 KRTAP4-6Q9BYQ5 205 aa2.89□□□□□ -1.95
CSNK2A1-202ENST00000349736 KRTAP2-3P0C7H8 128 aa2.85□□□□□ -1.95
CSNK2A1-202ENST00000349736 LCE5AQ5TCM9 118 aa2.85□□□□□ -1.95
CSNK2A1-202ENST00000349736 KRTAP2-4Q9BYR9 128 aa2.85□□□□□ -1.95
CSNK2A1-202ENST00000349736 KRTAP2-1Q9BYU5 128 aa2.85□□□□□ -1.95
CSNK2A1-202ENST00000349736 KRTAP6-1Q3LI64 71 aa2.82□□□□□ -1.96
CSNK2A1-202ENST00000349736 KRTAP9-7A8MTY7 169 aa2.82□□□□□ -1.96
CSNK2A1-202ENST00000349736 LCE1AQ5T7P2 110 aa2.82□□□□□ -1.96
CSNK2A1-202ENST00000349736 KRTAP19-4Q3LI73 84 aa2.79□□□□□ -1.96
CSNK2A1-202ENST00000349736 MT4P47944 62 aa2.79□□□□□ -1.96
CSNK2A1-202ENST00000349736 LCE3DQ9BYE3 92 aa2.78□□□□□ -1.96
CSNK2A1-202ENST00000349736 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.78□□□□□ -1.96
CSNK2A1-202ENST00000349736 LCE3EQ5T5B0 92 aa2.7□□□□□ -1.98
CSNK2A1-202ENST00000349736 KRTAP6-3Q3LI67 103 aa2.68□□□□□ -1.98
CSNK2A1-202ENST00000349736 MT1AP04731 61 aa2.67□□□□□ -1.98
CSNK2A1-202ENST00000349736 KRTAP6-2Q3LI66 62 aa2.64□□□□□ -1.99
CSNK2A1-202ENST00000349736 PRM1P04553 51 aa2.62□□□□□ -1.99
CSNK2A1-202ENST00000349736 KRTAP4-12Q9BQ66 201 aa2.6□□□□□ -1.99
CSNK2A1-202ENST00000349736 MT3P25713 68 aa2.56□□□□□ -2
CSNK2A1-202ENST00000349736 KRTAP5-9P26371 169 aa2.56□□□□□ -2
CSNK2A1-202ENST00000349736 MUC19Q7Z5P9 8384 aa2.54□□□□□ -2
CSNK2A1-202ENST00000349736 NEBP20929 6669 aa2.54□□□□□ -2
CSNK2A1-202ENST00000349736 KRTAP9-9Q9BYP9 154 aa2.53□□□□□ -2
CSNK2A1-202ENST00000349736 KRTAP9-4Q9BYQ2 154 aa2.53□□□□□ -2
CSNK2A1-202ENST00000349736 LCE1DQ5T752 114 aa2.52□□□□□ -2.01
CSNK2A1-202ENST00000349736 KRTAP20-1Q3LI63 56 aa2.51□□□□□ -2.01
CSNK2A1-202ENST00000349736 LCE1BQ5T7P3 118 aa2.49□□□□□ -2.01
CSNK2A1-202ENST00000349736 LCE4AQ5TA78 99 aa2.39□□□□□ -2.03
CSNK2A1-202ENST00000349736 KRTAP5-5Q701N2 237 aaPredicted RBP2.36□□□□□ -2.03
CSNK2A1-202ENST00000349736 MUC5ACP98088 5654 aa2.33□□□□□ -2.04
CSNK2A1-202ENST00000349736 HMCN1Q96RW7 5635 aa2.31□□□□□ -2.04
CSNK2A1-202ENST00000349736 KRTAP5-7Q6L8G8 165 aa2.31□□□□□ -2.04
CSNK2A1-202ENST00000349736 KRTAP2-2Q9BYT5 123 aa2.3□□□□□ -2.04
CSNK2A1-202ENST00000349736 KRTAP4-2Q9BYR5 136 aa2.3□□□□□ -2.04
CSNK2A1-202ENST00000349736 MUC5BQ9HC84 5762 aaPredicted RBP2.26□□□□□ -2.05
CSNK2A1-202ENST00000349736 KRTAP20-2Q3LI61 65 aa2.26□□□□□ -2.05
CSNK2A1-202ENST00000349736 KRTAP4-11Q9BYQ6 195 aa2.19□□□□□ -2.06
CSNK2A1-202ENST00000349736 KRTAP5-10Q6L8G5 202 aa2.15□□□□□ -2.06
CSNK2A1-202ENST00000349736 AHNAKQ09666 5890 aaKnown RBP2.13□□□□□ -2.07
CSNK2A1-202ENST00000349736 LCE1FQ5T754 118 aa2.11□□□□□ -2.07
CSNK2A1-202ENST00000349736 KRTAP5-4Q6L8H1 288 aa2.1□□□□□ -2.07
CSNK2A1-202ENST00000349736 GPR98Q8WXG9 6306 aa2.08□□□□□ -2.08
CSNK2A1-202ENST00000349736 KRTAP4-4Q9BYR3 166 aa2.05□□□□□ -2.08
CSNK2A1-202ENST00000349736 LCE1EQ5T753 118 aa2.02□□□□□ -2.09
CSNK2A1-202ENST00000349736 AHNAK2Q8IVF2 5795 aa1.99□□□□□ -2.09
CSNK2A1-202ENST00000349736 KRTAP5-3Q6L8H2 238 aa1.98□□□□□ -2.09
CSNK2A1-202ENST00000349736 KRTAP5-2Q701N4 177 aa1.9□□□□□ -2.11
CSNK2A1-202ENST00000349736 LCE1CQ5T751 118 aa1.87□□□□□ -2.11
CSNK2A1-202ENST00000349736 KRTAP5-8O75690 187 aa1.8□□□□□ -2.12
CSNK2A1-202ENST00000349736 KRTAP5-1Q6L8H4 278 aa1.76□□□□□ -2.13
CSNK2A1-202ENST00000349736 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.66□□□□□ -2.14
CSNK2A1-202ENST00000349736 KRTAP21-2Q3LI59 83 aa1.64□□□□□ -2.15
CSNK2A1-202ENST00000349736 KRTAP5-11Q6L8G4 156 aa1.58□□□□□ -2.16
CSNK2A1-202ENST00000349736 PHGR1C9JFL3 82 aa1.29□□□□□ -2.2
CSNK2A1-202ENST00000349736 KRTAP21-1Q3LI58 79 aa1.26□□□□□ -2.21
CSNK2A1-202ENST00000349736 MUC16Q8WXI7 14507 aa0.89□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 1276.9 ms