RNA–Protein interactions for RNA: ENST00000349496.9

CTNNB1-201, Transcript of catenin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNB1, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-201ENST00000349496 OBSCNQ5VST9 7968 aa4.1□□□□□ -1.75
CTNNB1-201ENST00000349496 CRCT1Q9UGL9 99 aa4.09□□□□□ -1.76
CTNNB1-201ENST00000349496 LCE1AQ5T7P2 110 aa4.07□□□□□ -1.76
CTNNB1-201ENST00000349496 LCE1EQ5T753 118 aa3.98□□□□□ -1.77
CTNNB1-201ENST00000349496 KRTAP19-7Q3SYF9 63 aa3.97□□□□□ -1.77
CTNNB1-201ENST00000349496 PRM1P04553 51 aa3.97□□□□□ -1.77
CTNNB1-201ENST00000349496 KRTAP4-3Q9BYR4 195 aa3.97□□□□□ -1.77
CTNNB1-201ENST00000349496 KRTAP2-2Q9BYT5 123 aa3.97□□□□□ -1.77
CTNNB1-201ENST00000349496 KRTAP6-3Q3LI67 103 aa3.93□□□□□ -1.78
CTNNB1-201ENST00000349496 SYNE2Q8WXH0 6885 aaKnown RBP3.93□□□□□ -1.78
CTNNB1-201ENST00000349496 LOC100996750A0A140TA64 210 aa3.92□□□□□ -1.78
CTNNB1-201ENST00000349496 MACF1Q9UPN3 7388 aaKnown RBP3.89□□□□□ -1.79
CTNNB1-201ENST00000349496 LCE2DQ5TA82 110 aaPredicted RBP3.88□□□□□ -1.79
CTNNB1-201ENST00000349496 KRTAP9-6A0A140TA67 174 aa3.87□□□□□ -1.79
CTNNB1-201ENST00000349496 MDN1Q9NU22 5596 aa3.83□□□□□ -1.8
CTNNB1-201ENST00000349496 MT1LQ93083 61 aa3.82□□□□□ -1.8
CTNNB1-201ENST00000349496 MT1EP04732 61 aa3.82□□□□□ -1.8
CTNNB1-201ENST00000349496 KRTAP9-7A8MTY7 169 aa3.79□□□□□ -1.8
CTNNB1-201ENST00000349496 MT1GP13640 62 aa3.79□□□□□ -1.8
CTNNB1-201ENST00000349496 LCE3BQ5TA77 95 aa3.77□□□□□ -1.81
CTNNB1-201ENST00000349496 LCE1DQ5T752 114 aa3.75□□□□□ -1.81
CTNNB1-201ENST00000349496 KRTAP4-9Q9BYQ8 210 aa3.73□□□□□ -1.81
CTNNB1-201ENST00000349496 KRTAP19-6Q3LI70 58 aa3.72□□□□□ -1.81
CTNNB1-201ENST00000349496 LCE3EQ5T5B0 92 aa3.69□□□□□ -1.82
CTNNB1-201ENST00000349496 KRTAP9-2Q9BYQ4 174 aa3.69□□□□□ -1.82
CTNNB1-201ENST00000349496 LCE3DQ9BYE3 92 aa3.69□□□□□ -1.82
CTNNB1-201ENST00000349496 SPRR2FQ96RM1 72 aa3.66□□□□□ -1.82
CTNNB1-201ENST00000349496 KRTAP19-4Q3LI73 84 aa3.65□□□□□ -1.83
CTNNB1-201ENST00000349496 MUC19Q7Z5P9 8384 aa3.64□□□□□ -1.83
CTNNB1-201ENST00000349496 MT1MQ8N339 61 aa3.59□□□□□ -1.83
CTNNB1-201ENST00000349496 LCE1FQ5T754 118 aa3.56□□□□□ -1.84
CTNNB1-201ENST00000349496 KRTAP19-3Q7Z4W3 81 aa3.55□□□□□ -1.84
CTNNB1-201ENST00000349496 KRTAP6-2Q3LI66 62 aa3.45□□□□□ -1.86
CTNNB1-201ENST00000349496 KRTAP5-5Q701N2 237 aaPredicted RBP3.42□□□□□ -1.86
CTNNB1-201ENST00000349496 LCE5AQ5TCM9 118 aa3.41□□□□□ -1.86
CTNNB1-201ENST00000349496 KRTAP6-1Q3LI64 71 aa3.36□□□□□ -1.87
CTNNB1-201ENST00000349496 MT1AP04731 61 aa3.31□□□□□ -1.88
CTNNB1-201ENST00000349496 SPRR2EP22531 72 aa3.28□□□□□ -1.88
CTNNB1-201ENST00000349496 SPRR2BP35325 72 aa3.28□□□□□ -1.88
CTNNB1-201ENST00000349496 SPRR2AP35326 72 aa3.28□□□□□ -1.88
CTNNB1-201ENST00000349496 KRTAP5-9P26371 169 aa3.21□□□□□ -1.9
CTNNB1-201ENST00000349496 SPRR2DP22532 72 aa3.1□□□□□ -1.91
CTNNB1-201ENST00000349496 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.04□□□□□ -1.92
CTNNB1-201ENST00000349496 MT3P25713 68 aa2.98□□□□□ -1.93
CTNNB1-201ENST00000349496 KRTAP4-11Q9BYQ6 195 aa2.96□□□□□ -1.94
CTNNB1-201ENST00000349496 MT4P47944 62 aa2.95□□□□□ -1.94
CTNNB1-201ENST00000349496 KRTAP9-4Q9BYQ2 154 aa2.95□□□□□ -1.94
CTNNB1-201ENST00000349496 NEBP20929 6669 aa2.94□□□□□ -1.94
CTNNB1-201ENST00000349496 KRTAP4-6Q9BYQ5 205 aa2.91□□□□□ -1.94
CTNNB1-201ENST00000349496 HMCN1Q96RW7 5635 aa2.84□□□□□ -1.96
CTNNB1-201ENST00000349496 KRTAP5-4Q6L8H1 288 aa2.73□□□□□ -1.97
CTNNB1-201ENST00000349496 LCE4AQ5TA78 99 aa2.68□□□□□ -1.98
CTNNB1-201ENST00000349496 LCE1CQ5T751 118 aa2.63□□□□□ -1.99
CTNNB1-201ENST00000349496 LCE1BQ5T7P3 118 aa2.63□□□□□ -1.99
CTNNB1-201ENST00000349496 MUC5ACP98088 5654 aa2.62□□□□□ -1.99
CTNNB1-201ENST00000349496 KRTAP20-2Q3LI61 65 aa2.62□□□□□ -1.99
CTNNB1-201ENST00000349496 KRTAP9-9Q9BYP9 154 aa2.54□□□□□ -2
CTNNB1-201ENST00000349496 KRTAP20-1Q3LI63 56 aa2.53□□□□□ -2
CTNNB1-201ENST00000349496 KRTAP5-2Q701N4 177 aa2.52□□□□□ -2.01
CTNNB1-201ENST00000349496 KRTAP5-3Q6L8H2 238 aa2.43□□□□□ -2.02
CTNNB1-201ENST00000349496 MUC5BQ9HC84 5762 aaPredicted RBP2.35□□□□□ -2.03
CTNNB1-201ENST00000349496 AHNAK2Q8IVF2 5795 aa2.32□□□□□ -2.04
CTNNB1-201ENST00000349496 KRTAP5-10Q6L8G5 202 aa2.3□□□□□ -2.04
CTNNB1-201ENST00000349496 KRTAP4-12Q9BQ66 201 aa2.27□□□□□ -2.05
CTNNB1-201ENST00000349496 KRTAP4-4Q9BYR3 166 aa2.27□□□□□ -2.05
CTNNB1-201ENST00000349496 KRTAP21-1Q3LI58 79 aa2.26□□□□□ -2.05
CTNNB1-201ENST00000349496 GPR98Q8WXG9 6306 aa2.25□□□□□ -2.05
CTNNB1-201ENST00000349496 KRTAP4-2Q9BYR5 136 aa2.23□□□□□ -2.05
CTNNB1-201ENST00000349496 KRTAP5-1Q6L8H4 278 aa2.19□□□□□ -2.06
CTNNB1-201ENST00000349496 KRTAP21-2Q3LI59 83 aa2.08□□□□□ -2.08
CTNNB1-201ENST00000349496 KRTAP5-8O75690 187 aa2.07□□□□□ -2.08
CTNNB1-201ENST00000349496 KRTAP5-7Q6L8G8 165 aa2.07□□□□□ -2.08
CTNNB1-201ENST00000349496 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.02□□□□□ -2.09
CTNNB1-201ENST00000349496 KRTAP5-11Q6L8G4 156 aa1.87□□□□□ -2.11
CTNNB1-201ENST00000349496 AHNAKQ09666 5890 aaKnown RBP1.69□□□□□ -2.14
CTNNB1-201ENST00000349496 PHGR1C9JFL3 82 aa1.59□□□□□ -2.16
CTNNB1-201ENST00000349496 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 12.2 ms