RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 MUC12Q9UKN1 5478 aa6.28□□□□□ -1.4
SCARF1-202ENST00000348987 KRTAP19-4Q3LI73 84 aa6.09□□□□□ -1.44
SCARF1-202ENST00000348987 KRTAP4-3Q9BYR4 195 aa6.08□□□□□ -1.44
SCARF1-202ENST00000348987 DSTQ03001 7570 aaKnown RBP6.08□□□□□ -1.44
SCARF1-202ENST00000348987 LOC100996750A0A140TA64 210 aa6.05□□□□□ -1.44
SCARF1-202ENST00000348987 LCE2DQ5TA82 110 aaPredicted RBP6.04□□□□□ -1.44
SCARF1-202ENST00000348987 KRTAP12-4P60329 112 aa6.03□□□□□ -1.44
SCARF1-202ENST00000348987 MACF1Q9UPN3 7388 aaKnown RBP6.02□□□□□ -1.45
SCARF1-202ENST00000348987 MT1GP13640 62 aa5.94□□□□□ -1.46
SCARF1-202ENST00000348987 SYNE2Q8WXH0 6885 aaKnown RBP5.92□□□□□ -1.46
SCARF1-202ENST00000348987 MT1MQ8N339 61 aa5.88□□□□□ -1.47
SCARF1-202ENST00000348987 CRCT1Q9UGL9 99 aa5.86□□□□□ -1.47
SCARF1-202ENST00000348987 KRTAP19-3Q7Z4W3 81 aa5.86□□□□□ -1.47
SCARF1-202ENST00000348987 SPRR2FQ96RM1 72 aa5.84□□□□□ -1.47
SCARF1-202ENST00000348987 MDN1Q9NU22 5596 aa5.78□□□□□ -1.48
SCARF1-202ENST00000348987 KRTAP9-2Q9BYQ4 174 aa5.75□□□□□ -1.49
SCARF1-202ENST00000348987 LCE5AQ5TCM9 118 aa5.67□□□□□ -1.5
SCARF1-202ENST00000348987 KRTAP4-9Q9BYQ8 210 aa5.63□□□□□ -1.51
SCARF1-202ENST00000348987 LCE3BQ5TA77 95 aa5.61□□□□□ -1.51
SCARF1-202ENST00000348987 SYNE1Q8NF91 8797 aaKnown RBP5.59□□□□□ -1.51
SCARF1-202ENST00000348987 KRTAP9-7A8MTY7 169 aa5.44□□□□□ -1.54
SCARF1-202ENST00000348987 LCE1AQ5T7P2 110 aa5.43□□□□□ -1.54
SCARF1-202ENST00000348987 PRM1P04553 51 aa5.41□□□□□ -1.54
SCARF1-202ENST00000348987 MT1AP04731 61 aa5.41□□□□□ -1.54
SCARF1-202ENST00000348987 KRTAP6-1Q3LI64 71 aa5.39□□□□□ -1.55
SCARF1-202ENST00000348987 KRTAP5-9P26371 169 aa5.38□□□□□ -1.55
SCARF1-202ENST00000348987 LCE3DQ9BYE3 92 aa5.38□□□□□ -1.55
SCARF1-202ENST00000348987 KRTAP5-5Q701N2 237 aaPredicted RBP5.37□□□□□ -1.55
SCARF1-202ENST00000348987 SPRR2EP22531 72 aa5.36□□□□□ -1.55
SCARF1-202ENST00000348987 SPRR2BP35325 72 aa5.36□□□□□ -1.55
SCARF1-202ENST00000348987 SPRR2AP35326 72 aa5.36□□□□□ -1.55
SCARF1-202ENST00000348987 LCE3EQ5T5B0 92 aa5.34□□□□□ -1.55
SCARF1-202ENST00000348987 OBSCNQ5VST9 7968 aa5.24□□□□□ -1.57
SCARF1-202ENST00000348987 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.16□□□□□ -1.58
SCARF1-202ENST00000348987 SPRR2DP22532 72 aa5.12□□□□□ -1.59
SCARF1-202ENST00000348987 KRTAP9-6A0A140TA67 174 aa5.07□□□□□ -1.6
SCARF1-202ENST00000348987 KRTAP6-2Q3LI66 62 aa5.07□□□□□ -1.6
SCARF1-202ENST00000348987 KRTAP6-3Q3LI67 103 aa5.06□□□□□ -1.6
SCARF1-202ENST00000348987 KRTAP9-4Q9BYQ2 154 aa4.93□□□□□ -1.62
SCARF1-202ENST00000348987 NEBP20929 6669 aa4.8□□□□□ -1.64
SCARF1-202ENST00000348987 KRTAP2-2Q9BYT5 123 aa4.8□□□□□ -1.64
SCARF1-202ENST00000348987 MT3P25713 68 aa4.69□□□□□ -1.66
SCARF1-202ENST00000348987 KRTAP4-6Q9BYQ5 205 aa4.62□□□□□ -1.67
SCARF1-202ENST00000348987 MT4P47944 62 aa4.61□□□□□ -1.67
SCARF1-202ENST00000348987 KRTAP5-4Q6L8H1 288 aa4.59□□□□□ -1.67
SCARF1-202ENST00000348987 HMCN1Q96RW7 5635 aa4.46□□□□□ -1.7
SCARF1-202ENST00000348987 LCE1EQ5T753 118 aa4.45□□□□□ -1.7
SCARF1-202ENST00000348987 KRTAP20-2Q3LI61 65 aa4.39□□□□□ -1.71
SCARF1-202ENST00000348987 LCE4AQ5TA78 99 aa4.34□□□□□ -1.71
SCARF1-202ENST00000348987 LCE1DQ5T752 114 aa4.32□□□□□ -1.72
SCARF1-202ENST00000348987 KRTAP5-2Q701N4 177 aa4.25□□□□□ -1.73
SCARF1-202ENST00000348987 KRTAP5-3Q6L8H2 238 aa4.16□□□□□ -1.74
SCARF1-202ENST00000348987 KRTAP20-1Q3LI63 56 aa4.15□□□□□ -1.74
SCARF1-202ENST00000348987 MUC5ACP98088 5654 aa4.12□□□□□ -1.75
SCARF1-202ENST00000348987 KRTAP4-11Q9BYQ6 195 aa4.06□□□□□ -1.76
SCARF1-202ENST00000348987 LCE1BQ5T7P3 118 aa3.93□□□□□ -1.78
SCARF1-202ENST00000348987 KRTAP5-10Q6L8G5 202 aa3.86□□□□□ -1.79
SCARF1-202ENST00000348987 KRTAP5-1Q6L8H4 278 aa3.69□□□□□ -1.82
SCARF1-202ENST00000348987 KRTAP4-2Q9BYR5 136 aa3.69□□□□□ -1.82
SCARF1-202ENST00000348987 LCE1CQ5T751 118 aa3.61□□□□□ -1.83
SCARF1-202ENST00000348987 AHNAK2Q8IVF2 5795 aa3.57□□□□□ -1.84
SCARF1-202ENST00000348987 KRTAP5-8O75690 187 aa3.53□□□□□ -1.84
SCARF1-202ENST00000348987 KRTAP21-2Q3LI59 83 aa3.46□□□□□ -1.86
SCARF1-202ENST00000348987 KRTAP21-1Q3LI58 79 aa3.4□□□□□ -1.86
SCARF1-202ENST00000348987 LCE1FQ5T754 118 aa3.4□□□□□ -1.87
SCARF1-202ENST00000348987 MUC5BQ9HC84 5762 aaPredicted RBP3.39□□□□□ -1.87
SCARF1-202ENST00000348987 MUC19Q7Z5P9 8384 aa3.38□□□□□ -1.87
SCARF1-202ENST00000348987 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.38□□□□□ -1.87
SCARF1-202ENST00000348987 KRTAP5-7Q6L8G8 165 aa3.33□□□□□ -1.88
SCARF1-202ENST00000348987 KRTAP4-4Q9BYR3 166 aa3.29□□□□□ -1.88
SCARF1-202ENST00000348987 KRTAP4-12Q9BQ66 201 aa3.2□□□□□ -1.9
SCARF1-202ENST00000348987 GPR98Q8WXG9 6306 aa3.12□□□□□ -1.91
SCARF1-202ENST00000348987 KRTAP5-11Q6L8G4 156 aa3.1□□□□□ -1.91
SCARF1-202ENST00000348987 KRTAP9-9Q9BYP9 154 aa3.03□□□□□ -1.93
SCARF1-202ENST00000348987 PHGR1C9JFL3 82 aa2.71□□□□□ -1.98
SCARF1-202ENST00000348987 AHNAKQ09666 5890 aaKnown RBP2.57□□□□□ -2
SCARF1-202ENST00000348987 MUC16Q8WXI7 14507 aa1.78□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 66.7 ms