RNA–Protein interactions for RNA: ENST00000347968.7

MBD1-204, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-204ENST00000347968 KRTAP19-6Q3LI70 58 aa5.31□□□□□ -1.56
MBD1-204ENST00000347968 KRTAP4-3Q9BYR4 195 aa5.26□□□□□ -1.57
MBD1-204ENST00000347968 MT1LQ93083 61 aa5.24□□□□□ -1.57
MBD1-204ENST00000347968 LCE2DQ5TA82 110 aaPredicted RBP5.22□□□□□ -1.57
MBD1-204ENST00000347968 DSTQ03001 7570 aaKnown RBP5.21□□□□□ -1.58
MBD1-204ENST00000347968 MUC12Q9UKN1 5478 aa5.18□□□□□ -1.58
MBD1-204ENST00000347968 MT1GP13640 62 aa5.18□□□□□ -1.58
MBD1-204ENST00000347968 SYNE1Q8NF91 8797 aaKnown RBP5.17□□□□□ -1.58
MBD1-204ENST00000347968 MACF1Q9UPN3 7388 aaKnown RBP5.16□□□□□ -1.58
MBD1-204ENST00000347968 KRTAP4-9Q9BYQ8 210 aa5.16□□□□□ -1.58
MBD1-204ENST00000347968 MT1EP04732 61 aa5.11□□□□□ -1.59
MBD1-204ENST00000347968 KRTAP9-2Q9BYQ4 174 aa5.1□□□□□ -1.59
MBD1-204ENST00000347968 SYNE2Q8WXH0 6885 aaKnown RBP5.08□□□□□ -1.6
MBD1-204ENST00000347968 OBSCNQ5VST9 7968 aa5.03□□□□□ -1.6
MBD1-204ENST00000347968 LCE3BQ5TA77 95 aa5.02□□□□□ -1.61
MBD1-204ENST00000347968 KRTAP9-7A8MTY7 169 aa5.02□□□□□ -1.61
MBD1-204ENST00000347968 PRM1P04553 51 aa4.95□□□□□ -1.62
MBD1-204ENST00000347968 SPRR2FQ96RM1 72 aa4.92□□□□□ -1.62
MBD1-204ENST00000347968 MDN1Q9NU22 5596 aa4.89□□□□□ -1.63
MBD1-204ENST00000347968 KRTAP19-3Q7Z4W3 81 aa4.82□□□□□ -1.64
MBD1-204ENST00000347968 KRTAP6-3Q3LI67 103 aa4.78□□□□□ -1.64
MBD1-204ENST00000347968 MT1MQ8N339 61 aa4.78□□□□□ -1.64
MBD1-204ENST00000347968 KRTAP5-5Q701N2 237 aaPredicted RBP4.78□□□□□ -1.64
MBD1-204ENST00000347968 KRTAP19-4Q3LI73 84 aa4.76□□□□□ -1.65
MBD1-204ENST00000347968 LCE1AQ5T7P2 110 aa4.74□□□□□ -1.65
MBD1-204ENST00000347968 KRTAP9-6A0A140TA67 174 aa4.73□□□□□ -1.65
MBD1-204ENST00000347968 LCE3DQ9BYE3 92 aa4.71□□□□□ -1.65
MBD1-204ENST00000347968 LCE5AQ5TCM9 118 aa4.69□□□□□ -1.66
MBD1-204ENST00000347968 LCE3EQ5T5B0 92 aa4.68□□□□□ -1.66
MBD1-204ENST00000347968 KRTAP5-9P26371 169 aa4.58□□□□□ -1.68
MBD1-204ENST00000347968 SPRR2EP22531 72 aa4.57□□□□□ -1.68
MBD1-204ENST00000347968 SPRR2BP35325 72 aa4.57□□□□□ -1.68
MBD1-204ENST00000347968 SPRR2AP35326 72 aa4.57□□□□□ -1.68
MBD1-204ENST00000347968 KRTAP6-1Q3LI64 71 aa4.57□□□□□ -1.68
MBD1-204ENST00000347968 KRTAP2-2Q9BYT5 123 aa4.55□□□□□ -1.68
MBD1-204ENST00000347968 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.55□□□□□ -1.68
MBD1-204ENST00000347968 KRTAP6-2Q3LI66 62 aa4.54□□□□□ -1.68
MBD1-204ENST00000347968 MT1AP04731 61 aa4.52□□□□□ -1.69
MBD1-204ENST00000347968 LCE1EQ5T753 118 aa4.52□□□□□ -1.69
MBD1-204ENST00000347968 SPRR2DP22532 72 aa4.37□□□□□ -1.71
MBD1-204ENST00000347968 LCE1DQ5T752 114 aa4.3□□□□□ -1.72
MBD1-204ENST00000347968 NEBP20929 6669 aa4.26□□□□□ -1.73
MBD1-204ENST00000347968 KRTAP9-4Q9BYQ2 154 aa3.98□□□□□ -1.77
MBD1-204ENST00000347968 MT4P47944 62 aa3.93□□□□□ -1.78
MBD1-204ENST00000347968 KRTAP4-6Q9BYQ5 205 aa3.9□□□□□ -1.79
MBD1-204ENST00000347968 KRTAP5-4Q6L8H1 288 aa3.86□□□□□ -1.79
MBD1-204ENST00000347968 MUC19Q7Z5P9 8384 aa3.83□□□□□ -1.8
MBD1-204ENST00000347968 HMCN1Q96RW7 5635 aa3.81□□□□□ -1.8
MBD1-204ENST00000347968 MT3P25713 68 aa3.81□□□□□ -1.8
MBD1-204ENST00000347968 KRTAP4-11Q9BYQ6 195 aa3.78□□□□□ -1.8
MBD1-204ENST00000347968 KRTAP20-1Q3LI63 56 aa3.72□□□□□ -1.81
MBD1-204ENST00000347968 KRTAP20-2Q3LI61 65 aa3.7□□□□□ -1.82
MBD1-204ENST00000347968 LCE4AQ5TA78 99 aa3.7□□□□□ -1.82
MBD1-204ENST00000347968 LCE1FQ5T754 118 aa3.64□□□□□ -1.83
MBD1-204ENST00000347968 MUC5ACP98088 5654 aa3.55□□□□□ -1.84
MBD1-204ENST00000347968 KRTAP5-2Q701N4 177 aa3.54□□□□□ -1.84
MBD1-204ENST00000347968 KRTAP5-3Q6L8H2 238 aa3.51□□□□□ -1.85
MBD1-204ENST00000347968 KRTAP5-10Q6L8G5 202 aa3.32□□□□□ -1.88
MBD1-204ENST00000347968 LCE1BQ5T7P3 118 aa3.31□□□□□ -1.88
MBD1-204ENST00000347968 AHNAK2Q8IVF2 5795 aa3.18□□□□□ -1.9
MBD1-204ENST00000347968 KRTAP5-1Q6L8H4 278 aa3.11□□□□□ -1.91
MBD1-204ENST00000347968 KRTAP4-2Q9BYR5 136 aa3.05□□□□□ -1.92
MBD1-204ENST00000347968 LCE1CQ5T751 118 aa3.03□□□□□ -1.92
MBD1-204ENST00000347968 KRTAP5-8O75690 187 aa3.02□□□□□ -1.93
MBD1-204ENST00000347968 KRTAP21-1Q3LI58 79 aa2.99□□□□□ -1.93
MBD1-204ENST00000347968 KRTAP4-4Q9BYR3 166 aa2.99□□□□□ -1.93
MBD1-204ENST00000347968 MUC5BQ9HC84 5762 aaPredicted RBP2.88□□□□□ -1.95
MBD1-204ENST00000347968 GPR98Q8WXG9 6306 aa2.85□□□□□ -1.95
MBD1-204ENST00000347968 KRTAP21-2Q3LI59 83 aa2.82□□□□□ -1.96
MBD1-204ENST00000347968 KRTAP5-7Q6L8G8 165 aa2.81□□□□□ -1.96
MBD1-204ENST00000347968 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.72□□□□□ -1.97
MBD1-204ENST00000347968 KRTAP4-12Q9BQ66 201 aa2.69□□□□□ -1.98
MBD1-204ENST00000347968 KRTAP9-9Q9BYP9 154 aa2.65□□□□□ -1.99
MBD1-204ENST00000347968 KRTAP5-11Q6L8G4 156 aa2.57□□□□□ -2
MBD1-204ENST00000347968 AHNAKQ09666 5890 aaKnown RBP2.29□□□□□ -2.04
MBD1-204ENST00000347968 PHGR1C9JFL3 82 aa2.25□□□□□ -2.05
MBD1-204ENST00000347968 MUC16Q8WXI7 14507 aa1.55□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 113.7 ms