RNA–Protein interactions for RNA: ENST00000347739.3

TNFRSF10B-202, Transcript of TNF receptor superfamily member 10b, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF10B, Length 1,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-202ENST00000347739 KRTAP19-3Q7Z4W3 81 aa7.74□□□□□ -1.17
TNFRSF10B-202ENST00000347739 KRTAP4-7Q9BYR0 210 aa7.74□□□□□ -1.17
TNFRSF10B-202ENST00000347739 MACF1Q9UPN3 7388 aaKnown RBP7.71□□□□□ -1.18
TNFRSF10B-202ENST00000347739 MT1GP13640 62 aa7.69□□□□□ -1.18
TNFRSF10B-202ENST00000347739 MUC12Q9UKN1 5478 aa7.68□□□□□ -1.18
TNFRSF10B-202ENST00000347739 KRTAP5-9P26371 169 aa7.63□□□□□ -1.19
TNFRSF10B-202ENST00000347739 MT1MQ8N339 61 aa7.61□□□□□ -1.19
TNFRSF10B-202ENST00000347739 KRTAP9-6A8MVA2 160 aa7.61□□□□□ -1.19
TNFRSF10B-202ENST00000347739 LCE5AQ5TCM9 118 aa7.58□□□□□ -1.2
TNFRSF10B-202ENST00000347739 KRTAP4-3Q9BYR4 195 aa7.45□□□□□ -1.22
TNFRSF10B-202ENST00000347739 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.43□□□□□ -1.22
TNFRSF10B-202ENST00000347739 LCE1AQ5T7P2 110 aa7.4□□□□□ -1.23
TNFRSF10B-202ENST00000347739 SYNE2Q8WXH0 6885 aaKnown RBP7.38□□□□□ -1.23
TNFRSF10B-202ENST00000347739 KRTAP6-3Q3LI67 103 aa7.35□□□□□ -1.23
TNFRSF10B-202ENST00000347739 MDN1Q9NU22 5596 aa7.31□□□□□ -1.24
TNFRSF10B-202ENST00000347739 KRTAP9-7A8MTY7 169 aa7.3□□□□□ -1.24
TNFRSF10B-202ENST00000347739 SPRR2EP22531 72 aa7.28□□□□□ -1.24
TNFRSF10B-202ENST00000347739 SPRR2BP35325 72 aa7.28□□□□□ -1.24
TNFRSF10B-202ENST00000347739 SPRR2AP35326 72 aa7.28□□□□□ -1.24
TNFRSF10B-202ENST00000347739 LOC100996750A0A140TA64 210 aa7.25□□□□□ -1.25
TNFRSF10B-202ENST00000347739 KRTAP2-3P0C7H8 128 aa7.15□□□□□ -1.27
TNFRSF10B-202ENST00000347739 KRTAP2-4Q9BYR9 128 aa7.15□□□□□ -1.27
TNFRSF10B-202ENST00000347739 KRTAP2-1Q9BYU5 128 aa7.15□□□□□ -1.27
TNFRSF10B-202ENST00000347739 SPRR2DP22532 72 aa7.01□□□□□ -1.29
TNFRSF10B-202ENST00000347739 DSTQ03001 7570 aaKnown RBP7□□□□□ -1.29
TNFRSF10B-202ENST00000347739 KRTAP5-5Q701N2 237 aaPredicted RBP6.87□□□□□ -1.31
TNFRSF10B-202ENST00000347739 MT1AP04731 61 aa6.78□□□□□ -1.32
TNFRSF10B-202ENST00000347739 NEBP20929 6669 aa6.76□□□□□ -1.33
TNFRSF10B-202ENST00000347739 INE1O15225 51 aa6.72□□□□□ -1.33
TNFRSF10B-202ENST00000347739 KRTAP6-1Q3LI64 71 aa6.72□□□□□ -1.33
TNFRSF10B-202ENST00000347739 LCE3BQ5TA77 95 aa6.71□□□□□ -1.34
TNFRSF10B-202ENST00000347739 KRTAP4-6Q9BYQ5 205 aa6.59□□□□□ -1.35
TNFRSF10B-202ENST00000347739 KRTAP5-4Q6L8H1 288 aa6.44□□□□□ -1.38
TNFRSF10B-202ENST00000347739 KRTAP9-4Q9BYQ2 154 aa6.42□□□□□ -1.38
TNFRSF10B-202ENST00000347739 KRTAP20-1Q3LI63 56 aa6.39□□□□□ -1.39
TNFRSF10B-202ENST00000347739 SYNE1Q8NF91 8797 aaKnown RBP6.38□□□□□ -1.39
TNFRSF10B-202ENST00000347739 KRTAP12-4P60329 112 aa6.28□□□□□ -1.4
TNFRSF10B-202ENST00000347739 KRTAP2-2Q9BYT5 123 aa6.25□□□□□ -1.41
TNFRSF10B-202ENST00000347739 LCE4AQ5TA78 99 aa6.24□□□□□ -1.41
TNFRSF10B-202ENST00000347739 KRTAP4-9Q9BYQ8 210 aa6.22□□□□□ -1.41
TNFRSF10B-202ENST00000347739 KRTAP6-2Q3LI66 62 aa6.13□□□□□ -1.43
TNFRSF10B-202ENST00000347739 MT3P25713 68 aa6.12□□□□□ -1.43
TNFRSF10B-202ENST00000347739 MT4P47944 62 aa6.06□□□□□ -1.44
TNFRSF10B-202ENST00000347739 LCE3DQ9BYE3 92 aa6.06□□□□□ -1.44
TNFRSF10B-202ENST00000347739 KRTAP20-2Q3LI61 65 aa5.99□□□□□ -1.45
TNFRSF10B-202ENST00000347739 LCE1DQ5T752 114 aa5.94□□□□□ -1.46
TNFRSF10B-202ENST00000347739 LCE3EQ5T5B0 92 aa5.92□□□□□ -1.46
TNFRSF10B-202ENST00000347739 KRTAP5-2Q701N4 177 aa5.89□□□□□ -1.47
TNFRSF10B-202ENST00000347739 HMCN1Q96RW7 5635 aa5.87□□□□□ -1.47
TNFRSF10B-202ENST00000347739 KRTAP5-3Q6L8H2 238 aa5.77□□□□□ -1.49
TNFRSF10B-202ENST00000347739 KRTAP4-12Q9BQ66 201 aa5.54□□□□□ -1.52
TNFRSF10B-202ENST00000347739 KRTAP9-9Q9BYP9 154 aa5.51□□□□□ -1.53
TNFRSF10B-202ENST00000347739 OBSCNQ5VST9 7968 aa5.47□□□□□ -1.53
TNFRSF10B-202ENST00000347739 GPR98Q8WXG9 6306 aa5.36□□□□□ -1.55
TNFRSF10B-202ENST00000347739 LCE1EQ5T753 118 aa5.28□□□□□ -1.56
TNFRSF10B-202ENST00000347739 PRM1P04553 51 aa5.27□□□□□ -1.57
TNFRSF10B-202ENST00000347739 AHNAK2Q8IVF2 5795 aa5.17□□□□□ -1.58
TNFRSF10B-202ENST00000347739 KRTAP4-11Q9BYQ6 195 aa5.13□□□□□ -1.59
TNFRSF10B-202ENST00000347739 KRTAP4-2Q9BYR5 136 aa5.11□□□□□ -1.59
TNFRSF10B-202ENST00000347739 KRTAP5-1Q6L8H4 278 aa5.05□□□□□ -1.6
TNFRSF10B-202ENST00000347739 KRTAP5-10Q6L8G5 202 aa5□□□□□ -1.61
TNFRSF10B-202ENST00000347739 MUC5ACP98088 5654 aa4.95□□□□□ -1.62
TNFRSF10B-202ENST00000347739 KRTAP5-8O75690 187 aa4.93□□□□□ -1.62
TNFRSF10B-202ENST00000347739 LCE1CQ5T751 118 aa4.93□□□□□ -1.62
TNFRSF10B-202ENST00000347739 LCE1BQ5T7P3 118 aa4.93□□□□□ -1.62
TNFRSF10B-202ENST00000347739 KRTAP5-7Q6L8G8 165 aa4.86□□□□□ -1.63
TNFRSF10B-202ENST00000347739 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.65□□□□□ -1.67
TNFRSF10B-202ENST00000347739 KRTAP21-2Q3LI59 83 aa4.41□□□□□ -1.7
TNFRSF10B-202ENST00000347739 KRTAP5-11Q6L8G4 156 aa4.32□□□□□ -1.72
TNFRSF10B-202ENST00000347739 MUC5BQ9HC84 5762 aaPredicted RBP4.24□□□□□ -1.73
TNFRSF10B-202ENST00000347739 AHNAKQ09666 5890 aaKnown RBP4.17□□□□□ -1.74
TNFRSF10B-202ENST00000347739 KRTAP4-4Q9BYR3 166 aa3.85□□□□□ -1.79
TNFRSF10B-202ENST00000347739 LCE1FQ5T754 118 aa3.84□□□□□ -1.8
TNFRSF10B-202ENST00000347739 PHGR1C9JFL3 82 aa3.7□□□□□ -1.82
TNFRSF10B-202ENST00000347739 KRTAP21-1Q3LI58 79 aa3.28□□□□□ -1.88
TNFRSF10B-202ENST00000347739 MUC19Q7Z5P9 8384 aa3.2□□□□□ -1.9
TNFRSF10B-202ENST00000347739 MUC16Q8WXI7 14507 aa2.4□□□□□ -2.02
Retrieved 77 of 20,778 RNA–protein pairs in 81.2 ms