RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 MT1GP13640 62 aa4.92□□□□□ -1.62
LMNA-201ENST00000347559 KRTAP19-4Q3LI73 84 aa4.9□□□□□ -1.62
LMNA-201ENST00000347559 KRTAP4-6Q9BYQ5 205 aa4.82□□□□□ -1.64
LMNA-201ENST00000347559 LCE2AQ5TA79 106 aaPredicted RBP4.77□□□□□ -1.65
LMNA-201ENST00000347559 FCGBPQ9Y6R7 5405 aaPredicted RBP4.75□□□□□ -1.65
LMNA-201ENST00000347559 KRTAP4-9Q9BYQ8 210 aa4.73□□□□□ -1.65
LMNA-201ENST00000347559 DSTQ03001 7570 aaKnown RBP4.73□□□□□ -1.65
LMNA-201ENST00000347559 LCE3BQ5TA77 95 aa4.71□□□□□ -1.66
LMNA-201ENST00000347559 MUC12Q9UKN1 5478 aa4.71□□□□□ -1.66
LMNA-201ENST00000347559 SYNE1Q8NF91 8797 aaKnown RBP4.67□□□□□ -1.66
LMNA-201ENST00000347559 FSIP2Q5CZC0 6907 aa4.66□□□□□ -1.66
LMNA-201ENST00000347559 MT1MQ8N339 61 aa4.66□□□□□ -1.66
LMNA-201ENST00000347559 SSPOA2VEC9 5147 aa4.6□□□□□ -1.67
LMNA-201ENST00000347559 KRTAP19-3Q7Z4W3 81 aa4.58□□□□□ -1.68
LMNA-201ENST00000347559 KRTAP9-2Q9BYQ4 174 aa4.57□□□□□ -1.68
LMNA-201ENST00000347559 KRTAP9-7A8MTY7 169 aa4.55□□□□□ -1.68
LMNA-201ENST00000347559 PRM1P04553 51 aa4.53□□□□□ -1.68
LMNA-201ENST00000347559 LCE3DQ9BYE3 92 aa4.48□□□□□ -1.69
LMNA-201ENST00000347559 LCE3EQ5T5B0 92 aa4.45□□□□□ -1.7
LMNA-201ENST00000347559 KRTAP5-5Q701N2 237 aaPredicted RBP4.41□□□□□ -1.7
LMNA-201ENST00000347559 MT1AP04731 61 aa4.41□□□□□ -1.7
LMNA-201ENST00000347559 KRTAP19-6Q3LI70 58 aa4.39□□□□□ -1.71
LMNA-201ENST00000347559 KRTAP6-1Q3LI64 71 aa4.38□□□□□ -1.71
LMNA-201ENST00000347559 OBSCNQ5VST9 7968 aa4.36□□□□□ -1.71
LMNA-201ENST00000347559 LCE5AQ5TCM9 118 aa4.32□□□□□ -1.72
LMNA-201ENST00000347559 SPRR2FQ96RM1 72 aa4.31□□□□□ -1.72
LMNA-201ENST00000347559 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.26□□□□□ -1.73
LMNA-201ENST00000347559 KRTAP9-6A0A140TA67 174 aa4.26□□□□□ -1.73
LMNA-201ENST00000347559 SYNE2Q8WXH0 6885 aaKnown RBP4.22□□□□□ -1.73
LMNA-201ENST00000347559 KRTAP6-2Q3LI66 62 aa4.22□□□□□ -1.73
LMNA-201ENST00000347559 KRTAP6-3Q3LI67 103 aa4.2□□□□□ -1.74
LMNA-201ENST00000347559 LCE1AQ5T7P2 110 aa4.09□□□□□ -1.75
LMNA-201ENST00000347559 KRTAP4-12Q9BQ66 201 aa4.06□□□□□ -1.76
LMNA-201ENST00000347559 KRTAP9-9Q9BYP9 154 aa4.05□□□□□ -1.76
LMNA-201ENST00000347559 KRTAP9-4Q9BYQ2 154 aa4.05□□□□□ -1.76
LMNA-201ENST00000347559 MDN1Q9NU22 5596 aa4□□□□□ -1.77
LMNA-201ENST00000347559 KRTAP2-2Q9BYT5 123 aa3.99□□□□□ -1.77
LMNA-201ENST00000347559 MACF1Q9UPN3 7388 aaKnown RBP3.96□□□□□ -1.77
LMNA-201ENST00000347559 LCE1DQ5T752 114 aa3.88□□□□□ -1.79
LMNA-201ENST00000347559 LCE1EQ5T753 118 aa3.79□□□□□ -1.8
LMNA-201ENST00000347559 MT3P25713 68 aa3.79□□□□□ -1.8
LMNA-201ENST00000347559 SPRR2EP22531 72 aa3.74□□□□□ -1.81
LMNA-201ENST00000347559 SPRR2BP35325 72 aa3.74□□□□□ -1.81
LMNA-201ENST00000347559 SPRR2AP35326 72 aa3.74□□□□□ -1.81
LMNA-201ENST00000347559 KRTAP4-2Q9BYR5 136 aa3.73□□□□□ -1.81
LMNA-201ENST00000347559 KRTAP5-9P26371 169 aa3.66□□□□□ -1.82
LMNA-201ENST00000347559 KRTAP4-11Q9BYQ6 195 aa3.61□□□□□ -1.83
LMNA-201ENST00000347559 SPRR2DP22532 72 aa3.54□□□□□ -1.84
LMNA-201ENST00000347559 LCE1FQ5T754 118 aa3.54□□□□□ -1.84
LMNA-201ENST00000347559 KRTAP5-3Q6L8H2 238 aa3.5□□□□□ -1.85
LMNA-201ENST00000347559 LCE4AQ5TA78 99 aa3.48□□□□□ -1.85
LMNA-201ENST00000347559 NEBP20929 6669 aa3.42□□□□□ -1.86
LMNA-201ENST00000347559 MUC5ACP98088 5654 aa3.32□□□□□ -1.88
LMNA-201ENST00000347559 KRTAP20-1Q3LI63 56 aa3.26□□□□□ -1.89
LMNA-201ENST00000347559 MT4P47944 62 aa3.26□□□□□ -1.89
LMNA-201ENST00000347559 KRTAP5-4Q6L8H1 288 aa3.22□□□□□ -1.89
LMNA-201ENST00000347559 LCE1BQ5T7P3 118 aa3.17□□□□□ -1.9
LMNA-201ENST00000347559 KRTAP5-10Q6L8G5 202 aa3.15□□□□□ -1.9
LMNA-201ENST00000347559 KRTAP20-2Q3LI61 65 aa3.1□□□□□ -1.91
LMNA-201ENST00000347559 KRTAP5-2Q701N4 177 aa3.06□□□□□ -1.92
LMNA-201ENST00000347559 MUC19Q7Z5P9 8384 aa3.03□□□□□ -1.92
LMNA-201ENST00000347559 HMCN1Q96RW7 5635 aa2.95□□□□□ -1.94
LMNA-201ENST00000347559 KRTAP5-1Q6L8H4 278 aa2.95□□□□□ -1.94
LMNA-201ENST00000347559 GPR98Q8WXG9 6306 aa2.85□□□□□ -1.95
LMNA-201ENST00000347559 KRTAP21-1Q3LI58 79 aa2.77□□□□□ -1.97
LMNA-201ENST00000347559 KRTAP4-4Q9BYR3 166 aa2.75□□□□□ -1.97
LMNA-201ENST00000347559 KRTAP21-2Q3LI59 83 aa2.74□□□□□ -1.97
LMNA-201ENST00000347559 LCE1CQ5T751 118 aa2.73□□□□□ -1.97
LMNA-201ENST00000347559 AHNAK2Q8IVF2 5795 aa2.65□□□□□ -1.99
LMNA-201ENST00000347559 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.55□□□□□ -2
LMNA-201ENST00000347559 KRTAP5-7Q6L8G8 165 aa2.42□□□□□ -2.02
LMNA-201ENST00000347559 KRTAP5-11Q6L8G4 156 aa2.41□□□□□ -2.02
LMNA-201ENST00000347559 KRTAP5-8O75690 187 aa2.38□□□□□ -2.03
LMNA-201ENST00000347559 MUC5BQ9HC84 5762 aaPredicted RBP2.3□□□□□ -2.04
LMNA-201ENST00000347559 AHNAKQ09666 5890 aaKnown RBP2.16□□□□□ -2.06
LMNA-201ENST00000347559 PHGR1C9JFL3 82 aa2□□□□□ -2.09
LMNA-201ENST00000347559 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 141.7 ms