RNA–Protein interactions for RNA: ENST00000347547.6

LRP8-202, Transcript of LDL receptor related protein 8, humanhuman

TSL 1 (best) BASIC

Gene LRP8, Length 2,382 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-202ENST00000347547 MT1EP04732 61 aa5.17□□□□□ -1.58
LRP8-202ENST00000347547 FCGBPQ9Y6R7 5405 aaPredicted RBP5.15□□□□□ -1.58
LRP8-202ENST00000347547 KRTAP9-2Q9BYQ4 174 aa5.13□□□□□ -1.59
LRP8-202ENST00000347547 KRTAP12-4P60329 112 aa5.03□□□□□ -1.6
LRP8-202ENST00000347547 KRTAP9-6A0A140TA67 174 aa4.94□□□□□ -1.62
LRP8-202ENST00000347547 LOC100996750A0A140TA64 210 aa4.93□□□□□ -1.62
LRP8-202ENST00000347547 CRCT1Q9UGL9 99 aa4.92□□□□□ -1.62
LRP8-202ENST00000347547 MT1GP13640 62 aa4.87□□□□□ -1.63
LRP8-202ENST00000347547 MACF1Q9UPN3 7388 aaKnown RBP4.87□□□□□ -1.63
LRP8-202ENST00000347547 KRTAP4-3Q9BYR4 195 aa4.86□□□□□ -1.63
LRP8-202ENST00000347547 MT1MQ8N339 61 aa4.79□□□□□ -1.64
LRP8-202ENST00000347547 MUC12Q9UKN1 5478 aa4.79□□□□□ -1.64
LRP8-202ENST00000347547 KRTAP19-3Q7Z4W3 81 aa4.73□□□□□ -1.65
LRP8-202ENST00000347547 SPRR2FQ96RM1 72 aa4.71□□□□□ -1.66
LRP8-202ENST00000347547 SYNE2Q8WXH0 6885 aaKnown RBP4.71□□□□□ -1.66
LRP8-202ENST00000347547 MT1AP04731 61 aa4.7□□□□□ -1.66
LRP8-202ENST00000347547 KRTAP5-9P26371 169 aa4.69□□□□□ -1.66
LRP8-202ENST00000347547 LCE5AQ5TCM9 118 aa4.65□□□□□ -1.67
LRP8-202ENST00000347547 LCE3BQ5TA77 95 aa4.61□□□□□ -1.67
LRP8-202ENST00000347547 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.58□□□□□ -1.68
LRP8-202ENST00000347547 KRTAP4-9Q9BYQ8 210 aa4.57□□□□□ -1.68
LRP8-202ENST00000347547 DSTQ03001 7570 aaKnown RBP4.57□□□□□ -1.68
LRP8-202ENST00000347547 MDN1Q9NU22 5596 aa4.55□□□□□ -1.68
LRP8-202ENST00000347547 LCE1AQ5T7P2 110 aa4.55□□□□□ -1.68
LRP8-202ENST00000347547 KRTAP5-5Q701N2 237 aaPredicted RBP4.53□□□□□ -1.68
LRP8-202ENST00000347547 LCE3DQ9BYE3 92 aa4.53□□□□□ -1.68
LRP8-202ENST00000347547 LCE3EQ5T5B0 92 aa4.53□□□□□ -1.68
LRP8-202ENST00000347547 PRM1P04553 51 aa4.5□□□□□ -1.69
LRP8-202ENST00000347547 KRTAP6-3Q3LI67 103 aa4.49□□□□□ -1.69
LRP8-202ENST00000347547 KRTAP9-7A8MTY7 169 aa4.48□□□□□ -1.69
LRP8-202ENST00000347547 KRTAP6-1Q3LI64 71 aa4.43□□□□□ -1.7
LRP8-202ENST00000347547 SPRR2EP22531 72 aa4.42□□□□□ -1.7
LRP8-202ENST00000347547 SPRR2BP35325 72 aa4.42□□□□□ -1.7
LRP8-202ENST00000347547 SPRR2AP35326 72 aa4.42□□□□□ -1.7
LRP8-202ENST00000347547 SYNE1Q8NF91 8797 aaKnown RBP4.33□□□□□ -1.72
LRP8-202ENST00000347547 SPRR2DP22532 72 aa4.25□□□□□ -1.73
LRP8-202ENST00000347547 NEBP20929 6669 aa4.25□□□□□ -1.73
LRP8-202ENST00000347547 KRTAP6-2Q3LI66 62 aa4.24□□□□□ -1.73
LRP8-202ENST00000347547 KRTAP9-4Q9BYQ2 154 aa4.1□□□□□ -1.75
LRP8-202ENST00000347547 KRTAP2-2Q9BYT5 123 aa4.09□□□□□ -1.75
LRP8-202ENST00000347547 KRTAP5-4Q6L8H1 288 aa3.97□□□□□ -1.77
LRP8-202ENST00000347547 MT3P25713 68 aa3.91□□□□□ -1.78
LRP8-202ENST00000347547 KRTAP20-1Q3LI63 56 aa3.9□□□□□ -1.79
LRP8-202ENST00000347547 OBSCNQ5VST9 7968 aa3.86□□□□□ -1.79
LRP8-202ENST00000347547 LCE4AQ5TA78 99 aa3.78□□□□□ -1.8
LRP8-202ENST00000347547 KRTAP4-6Q9BYQ5 205 aa3.75□□□□□ -1.81
LRP8-202ENST00000347547 MT4P47944 62 aa3.7□□□□□ -1.82
LRP8-202ENST00000347547 KRTAP20-2Q3LI61 65 aa3.68□□□□□ -1.82
LRP8-202ENST00000347547 HMCN1Q96RW7 5635 aa3.66□□□□□ -1.82
LRP8-202ENST00000347547 LCE1DQ5T752 114 aa3.65□□□□□ -1.83
LRP8-202ENST00000347547 KRTAP5-2Q701N4 177 aa3.63□□□□□ -1.83
LRP8-202ENST00000347547 LCE1EQ5T753 118 aa3.62□□□□□ -1.83
LRP8-202ENST00000347547 KRTAP5-3Q6L8H2 238 aa3.57□□□□□ -1.84
LRP8-202ENST00000347547 GPR98Q8WXG9 6306 aa3.39□□□□□ -1.87
LRP8-202ENST00000347547 KRTAP4-11Q9BYQ6 195 aa3.32□□□□□ -1.88
LRP8-202ENST00000347547 MUC5ACP98088 5654 aa3.3□□□□□ -1.88
LRP8-202ENST00000347547 KRTAP5-10Q6L8G5 202 aa3.28□□□□□ -1.88
LRP8-202ENST00000347547 KRTAP5-1Q6L8H4 278 aa3.2□□□□□ -1.9
LRP8-202ENST00000347547 AHNAK2Q8IVF2 5795 aa3.2□□□□□ -1.9
LRP8-202ENST00000347547 LCE1BQ5T7P3 118 aa3.1□□□□□ -1.91
LRP8-202ENST00000347547 KRTAP5-8O75690 187 aa3.05□□□□□ -1.92
LRP8-202ENST00000347547 KRTAP4-2Q9BYR5 136 aa3.04□□□□□ -1.92
LRP8-202ENST00000347547 LCE1CQ5T751 118 aa3□□□□□ -1.93
LRP8-202ENST00000347547 KRTAP5-7Q6L8G8 165 aa3□□□□□ -1.93
LRP8-202ENST00000347547 KRTAP4-12Q9BQ66 201 aa3□□□□□ -1.93
LRP8-202ENST00000347547 KRTAP9-9Q9BYP9 154 aa3□□□□□ -1.93
LRP8-202ENST00000347547 KRTAP21-1Q3LI58 79 aa2.95□□□□□ -1.94
LRP8-202ENST00000347547 KRTAP21-2Q3LI59 83 aa2.87□□□□□ -1.95
LRP8-202ENST00000347547 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.85□□□□□ -1.95
LRP8-202ENST00000347547 LCE1FQ5T754 118 aa2.79□□□□□ -1.96
LRP8-202ENST00000347547 KRTAP5-11Q6L8G4 156 aa2.64□□□□□ -1.99
LRP8-202ENST00000347547 AHNAKQ09666 5890 aaKnown RBP2.64□□□□□ -1.99
LRP8-202ENST00000347547 MUC5BQ9HC84 5762 aaPredicted RBP2.63□□□□□ -1.99
LRP8-202ENST00000347547 KRTAP4-4Q9BYR3 166 aa2.59□□□□□ -2
LRP8-202ENST00000347547 MUC19Q7Z5P9 8384 aa2.49□□□□□ -2.01
LRP8-202ENST00000347547 PHGR1C9JFL3 82 aa2.27□□□□□ -2.05
LRP8-202ENST00000347547 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 50 ms