RNA–Protein interactions for RNA: ENST00000347140.7

R3HDM2-201, Transcript of R3H domain containing 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene R3HDM2, Length 4,331 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-201ENST00000347140 MT1GP13640 62 aa5.06□□□□□ -1.6
R3HDM2-201ENST00000347140 LOC100996750A0A140TA64 210 aa5□□□□□ -1.61
R3HDM2-201ENST00000347140 LCE2AQ5TA79 106 aaPredicted RBP4.96□□□□□ -1.62
R3HDM2-201ENST00000347140 KRTAP4-3Q9BYR4 195 aa4.95□□□□□ -1.62
R3HDM2-201ENST00000347140 MT1MQ8N339 61 aa4.85□□□□□ -1.63
R3HDM2-201ENST00000347140 LCE3BQ5TA77 95 aa4.85□□□□□ -1.63
R3HDM2-201ENST00000347140 KRTAP19-3Q7Z4W3 81 aa4.85□□□□□ -1.63
R3HDM2-201ENST00000347140 KRTAP19-6Q3LI70 58 aa4.76□□□□□ -1.65
R3HDM2-201ENST00000347140 SPRR2FQ96RM1 72 aa4.74□□□□□ -1.65
R3HDM2-201ENST00000347140 FSIP2Q5CZC0 6907 aa4.7□□□□□ -1.66
R3HDM2-201ENST00000347140 LCE2DQ5TA82 110 aaPredicted RBP4.67□□□□□ -1.66
R3HDM2-201ENST00000347140 LCE3DQ9BYE3 92 aa4.64□□□□□ -1.67
R3HDM2-201ENST00000347140 KRTAP4-9Q9BYQ8 210 aa4.64□□□□□ -1.67
R3HDM2-201ENST00000347140 LCE3EQ5T5B0 92 aa4.6□□□□□ -1.67
R3HDM2-201ENST00000347140 SSPOA2VEC9 5147 aa4.58□□□□□ -1.68
R3HDM2-201ENST00000347140 FCGBPQ9Y6R7 5405 aaPredicted RBP4.57□□□□□ -1.68
R3HDM2-201ENST00000347140 MUC12Q9UKN1 5478 aa4.55□□□□□ -1.68
R3HDM2-201ENST00000347140 DSTQ03001 7570 aaKnown RBP4.53□□□□□ -1.68
R3HDM2-201ENST00000347140 PRM1P04553 51 aa4.51□□□□□ -1.69
R3HDM2-201ENST00000347140 MT1AP04731 61 aa4.51□□□□□ -1.69
R3HDM2-201ENST00000347140 LCE5AQ5TCM9 118 aa4.5□□□□□ -1.69
R3HDM2-201ENST00000347140 KRTAP9-2Q9BYQ4 174 aa4.45□□□□□ -1.7
R3HDM2-201ENST00000347140 KRTAP6-1Q3LI64 71 aa4.44□□□□□ -1.7
R3HDM2-201ENST00000347140 KRTAP9-7A8MTY7 169 aa4.39□□□□□ -1.71
R3HDM2-201ENST00000347140 SPRR2EP22531 72 aa4.37□□□□□ -1.71
R3HDM2-201ENST00000347140 SPRR2BP35325 72 aa4.37□□□□□ -1.71
R3HDM2-201ENST00000347140 SPRR2AP35326 72 aa4.37□□□□□ -1.71
R3HDM2-201ENST00000347140 MUC19Q7Z5P9 8384 aa4.34□□□□□ -1.71
R3HDM2-201ENST00000347140 SYNE2Q8WXH0 6885 aaKnown RBP4.26□□□□□ -1.73
R3HDM2-201ENST00000347140 MT3P25713 68 aa4.25□□□□□ -1.73
R3HDM2-201ENST00000347140 SPRR2DP22532 72 aa4.23□□□□□ -1.73
R3HDM2-201ENST00000347140 KRTAP6-2Q3LI66 62 aa4.21□□□□□ -1.74
R3HDM2-201ENST00000347140 KRTAP5-5Q701N2 237 aaPredicted RBP4.21□□□□□ -1.74
R3HDM2-201ENST00000347140 KRTAP9-4Q9BYQ2 154 aa4.11□□□□□ -1.75
R3HDM2-201ENST00000347140 LCE1AQ5T7P2 110 aa4.08□□□□□ -1.76
R3HDM2-201ENST00000347140 MACF1Q9UPN3 7388 aaKnown RBP4.07□□□□□ -1.76
R3HDM2-201ENST00000347140 KRTAP9-6A0A140TA67 174 aa3.96□□□□□ -1.78
R3HDM2-201ENST00000347140 KRTAP2-2Q9BYT5 123 aa3.91□□□□□ -1.78
R3HDM2-201ENST00000347140 MDN1Q9NU22 5596 aa3.89□□□□□ -1.79
R3HDM2-201ENST00000347140 KRTAP6-3Q3LI67 103 aa3.88□□□□□ -1.79
R3HDM2-201ENST00000347140 KRTAP5-9P26371 169 aa3.85□□□□□ -1.79
R3HDM2-201ENST00000347140 LCE1BQ5T7P3 118 aa3.84□□□□□ -1.79
R3HDM2-201ENST00000347140 LCE1DQ5T752 114 aa3.76□□□□□ -1.81
R3HDM2-201ENST00000347140 MT4P47944 62 aa3.7□□□□□ -1.82
R3HDM2-201ENST00000347140 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.63□□□□□ -1.83
R3HDM2-201ENST00000347140 KRTAP20-1Q3LI63 56 aa3.61□□□□□ -1.83
R3HDM2-201ENST00000347140 LCE1EQ5T753 118 aa3.57□□□□□ -1.84
R3HDM2-201ENST00000347140 LCE4AQ5TA78 99 aa3.51□□□□□ -1.85
R3HDM2-201ENST00000347140 KRTAP4-6Q9BYQ5 205 aa3.43□□□□□ -1.86
R3HDM2-201ENST00000347140 KRTAP4-11Q9BYQ6 195 aa3.37□□□□□ -1.87
R3HDM2-201ENST00000347140 KRTAP5-4Q6L8H1 288 aa3.36□□□□□ -1.87
R3HDM2-201ENST00000347140 KRTAP20-2Q3LI61 65 aa3.33□□□□□ -1.88
R3HDM2-201ENST00000347140 MUC5ACP98088 5654 aa3.23□□□□□ -1.89
R3HDM2-201ENST00000347140 KRTAP5-2Q701N4 177 aa3.17□□□□□ -1.9
R3HDM2-201ENST00000347140 LCE1CQ5T751 118 aa3.17□□□□□ -1.9
R3HDM2-201ENST00000347140 LCE1FQ5T754 118 aa3.17□□□□□ -1.9
R3HDM2-201ENST00000347140 NEBP20929 6669 aa3.14□□□□□ -1.91
R3HDM2-201ENST00000347140 KRTAP5-10Q6L8G5 202 aa3.12□□□□□ -1.91
R3HDM2-201ENST00000347140 HMCN1Q96RW7 5635 aa3.01□□□□□ -1.93
R3HDM2-201ENST00000347140 KRTAP5-3Q6L8H2 238 aa2.98□□□□□ -1.93
R3HDM2-201ENST00000347140 GPR98Q8WXG9 6306 aa2.97□□□□□ -1.93
R3HDM2-201ENST00000347140 KRTAP5-1Q6L8H4 278 aa2.91□□□□□ -1.94
R3HDM2-201ENST00000347140 KRTAP9-9Q9BYP9 154 aa2.89□□□□□ -1.95
R3HDM2-201ENST00000347140 KRTAP4-2Q9BYR5 136 aa2.84□□□□□ -1.95
R3HDM2-201ENST00000347140 KRTAP4-4Q9BYR3 166 aa2.78□□□□□ -1.96
R3HDM2-201ENST00000347140 KRTAP21-2Q3LI59 83 aa2.73□□□□□ -1.97
R3HDM2-201ENST00000347140 KRTAP21-1Q3LI58 79 aa2.65□□□□□ -1.98
R3HDM2-201ENST00000347140 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.62□□□□□ -1.99
R3HDM2-201ENST00000347140 KRTAP4-12Q9BQ66 201 aa2.55□□□□□ -2
R3HDM2-201ENST00000347140 KRTAP5-8O75690 187 aa2.44□□□□□ -2.02
R3HDM2-201ENST00000347140 AHNAK2Q8IVF2 5795 aa2.44□□□□□ -2.02
R3HDM2-201ENST00000347140 KRTAP5-11Q6L8G4 156 aa2.44□□□□□ -2.02
R3HDM2-201ENST00000347140 KRTAP5-7Q6L8G8 165 aa2.32□□□□□ -2.04
R3HDM2-201ENST00000347140 MUC5BQ9HC84 5762 aaPredicted RBP2.28□□□□□ -2.04
R3HDM2-201ENST00000347140 PHGR1C9JFL3 82 aa2.1□□□□□ -2.07
R3HDM2-201ENST00000347140 AHNAKQ09666 5890 aaKnown RBP2.02□□□□□ -2.09
R3HDM2-201ENST00000347140 MUC16Q8WXI7 14507 aa1.41□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 12.7 ms