RNA–Protein interactions for RNA: ENST00000345851.7

TRIM3-201, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM3, Length 2,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-201ENST00000345851 MACF1Q9UPN3 7388 aaKnown RBP7.18□□□□□ -1.26
TRIM3-201ENST00000345851 MT1LQ93083 61 aa7.14□□□□□ -1.27
TRIM3-201ENST00000345851 MT1EP04732 61 aa7.14□□□□□ -1.27
TRIM3-201ENST00000345851 KRTAP9-2Q9BYQ4 174 aa7.1□□□□□ -1.27
TRIM3-201ENST00000345851 SYNE2Q8WXH0 6885 aaKnown RBP7.04□□□□□ -1.28
TRIM3-201ENST00000345851 LOC100996750A0A140TA64 210 aa6.99□□□□□ -1.29
TRIM3-201ENST00000345851 DSTQ03001 7570 aaKnown RBP6.98□□□□□ -1.29
TRIM3-201ENST00000345851 KRTAP19-4Q3LI73 84 aa6.92□□□□□ -1.3
TRIM3-201ENST00000345851 KRTAP12-4P60329 112 aa6.9□□□□□ -1.3
TRIM3-201ENST00000345851 KRTAP4-3Q9BYR4 195 aa6.9□□□□□ -1.3
TRIM3-201ENST00000345851 SPRR2FQ96RM1 72 aa6.89□□□□□ -1.31
TRIM3-201ENST00000345851 CRCT1Q9UGL9 99 aa6.86□□□□□ -1.31
TRIM3-201ENST00000345851 MT1GP13640 62 aa6.84□□□□□ -1.31
TRIM3-201ENST00000345851 MDN1Q9NU22 5596 aa6.81□□□□□ -1.32
TRIM3-201ENST00000345851 KRTAP19-3Q7Z4W3 81 aa6.76□□□□□ -1.33
TRIM3-201ENST00000345851 MT1MQ8N339 61 aa6.71□□□□□ -1.34
TRIM3-201ENST00000345851 LCE5AQ5TCM9 118 aa6.59□□□□□ -1.35
TRIM3-201ENST00000345851 KRTAP4-9Q9BYQ8 210 aa6.52□□□□□ -1.37
TRIM3-201ENST00000345851 LCE3BQ5TA77 95 aa6.5□□□□□ -1.37
TRIM3-201ENST00000345851 SYNE1Q8NF91 8797 aaKnown RBP6.45□□□□□ -1.38
TRIM3-201ENST00000345851 LCE1AQ5T7P2 110 aa6.43□□□□□ -1.38
TRIM3-201ENST00000345851 KRTAP5-9P26371 169 aa6.42□□□□□ -1.38
TRIM3-201ENST00000345851 SPRR2EP22531 72 aa6.38□□□□□ -1.39
TRIM3-201ENST00000345851 SPRR2BP35325 72 aa6.38□□□□□ -1.39
TRIM3-201ENST00000345851 SPRR2AP35326 72 aa6.38□□□□□ -1.39
TRIM3-201ENST00000345851 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.33□□□□□ -1.4
TRIM3-201ENST00000345851 KRTAP9-6A0A140TA67 174 aa6.31□□□□□ -1.4
TRIM3-201ENST00000345851 KRTAP9-7A8MTY7 169 aa6.24□□□□□ -1.41
TRIM3-201ENST00000345851 OBSCNQ5VST9 7968 aa6.24□□□□□ -1.41
TRIM3-201ENST00000345851 PRM1P04553 51 aa6.2□□□□□ -1.42
TRIM3-201ENST00000345851 LCE3DQ9BYE3 92 aa6.18□□□□□ -1.42
TRIM3-201ENST00000345851 MT1AP04731 61 aa6.15□□□□□ -1.42
TRIM3-201ENST00000345851 KRTAP6-1Q3LI64 71 aa6.13□□□□□ -1.43
TRIM3-201ENST00000345851 KRTAP6-3Q3LI67 103 aa6.12□□□□□ -1.43
TRIM3-201ENST00000345851 LCE3EQ5T5B0 92 aa6.12□□□□□ -1.43
TRIM3-201ENST00000345851 KRTAP5-5Q701N2 237 aaPredicted RBP6.12□□□□□ -1.43
TRIM3-201ENST00000345851 SPRR2DP22532 72 aa6.1□□□□□ -1.43
TRIM3-201ENST00000345851 NEBP20929 6669 aa5.85□□□□□ -1.47
TRIM3-201ENST00000345851 KRTAP6-2Q3LI66 62 aa5.82□□□□□ -1.48
TRIM3-201ENST00000345851 KRTAP9-4Q9BYQ2 154 aa5.6□□□□□ -1.51
TRIM3-201ENST00000345851 MT4P47944 62 aa5.48□□□□□ -1.53
TRIM3-201ENST00000345851 KRTAP2-2Q9BYT5 123 aa5.46□□□□□ -1.53
TRIM3-201ENST00000345851 KRTAP4-6Q9BYQ5 205 aa5.45□□□□□ -1.54
TRIM3-201ENST00000345851 KRTAP5-4Q6L8H1 288 aa5.42□□□□□ -1.54
TRIM3-201ENST00000345851 LCE1EQ5T753 118 aa5.4□□□□□ -1.55
TRIM3-201ENST00000345851 MT3P25713 68 aa5.32□□□□□ -1.56
TRIM3-201ENST00000345851 HMCN1Q96RW7 5635 aa5.29□□□□□ -1.56
TRIM3-201ENST00000345851 LCE1DQ5T752 114 aa5.19□□□□□ -1.58
TRIM3-201ENST00000345851 KRTAP20-2Q3LI61 65 aa5.18□□□□□ -1.58
TRIM3-201ENST00000345851 LCE4AQ5TA78 99 aa5.18□□□□□ -1.58
TRIM3-201ENST00000345851 KRTAP20-1Q3LI63 56 aa5.16□□□□□ -1.58
TRIM3-201ENST00000345851 KRTAP5-2Q701N4 177 aa4.97□□□□□ -1.61
TRIM3-201ENST00000345851 KRTAP5-3Q6L8H2 238 aa4.92□□□□□ -1.62
TRIM3-201ENST00000345851 KRTAP4-11Q9BYQ6 195 aa4.68□□□□□ -1.66
TRIM3-201ENST00000345851 MUC5ACP98088 5654 aa4.67□□□□□ -1.66
TRIM3-201ENST00000345851 MUC19Q7Z5P9 8384 aa4.57□□□□□ -1.68
TRIM3-201ENST00000345851 LCE1BQ5T7P3 118 aa4.53□□□□□ -1.68
TRIM3-201ENST00000345851 KRTAP5-10Q6L8G5 202 aa4.42□□□□□ -1.7
TRIM3-201ENST00000345851 AHNAK2Q8IVF2 5795 aa4.38□□□□□ -1.71
TRIM3-201ENST00000345851 KRTAP5-1Q6L8H4 278 aa4.35□□□□□ -1.71
TRIM3-201ENST00000345851 LCE1FQ5T754 118 aa4.28□□□□□ -1.72
TRIM3-201ENST00000345851 KRTAP4-2Q9BYR5 136 aa4.28□□□□□ -1.72
TRIM3-201ENST00000345851 KRTAP5-8O75690 187 aa4.23□□□□□ -1.73
TRIM3-201ENST00000345851 LCE1CQ5T751 118 aa4.17□□□□□ -1.74
TRIM3-201ENST00000345851 MUC5BQ9HC84 5762 aaPredicted RBP4□□□□□ -1.77
TRIM3-201ENST00000345851 KRTAP5-7Q6L8G8 165 aa3.94□□□□□ -1.78
TRIM3-201ENST00000345851 GPR98Q8WXG9 6306 aa3.9□□□□□ -1.79
TRIM3-201ENST00000345851 KRTAP21-2Q3LI59 83 aa3.88□□□□□ -1.79
TRIM3-201ENST00000345851 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.84□□□□□ -1.79
TRIM3-201ENST00000345851 KRTAP21-1Q3LI58 79 aa3.84□□□□□ -1.8
TRIM3-201ENST00000345851 KRTAP4-4Q9BYR3 166 aa3.77□□□□□ -1.81
TRIM3-201ENST00000345851 KRTAP4-12Q9BQ66 201 aa3.74□□□□□ -1.81
TRIM3-201ENST00000345851 KRTAP9-9Q9BYP9 154 aa3.69□□□□□ -1.82
TRIM3-201ENST00000345851 KRTAP5-11Q6L8G4 156 aa3.62□□□□□ -1.83
TRIM3-201ENST00000345851 PHGR1C9JFL3 82 aa3.16□□□□□ -1.9
TRIM3-201ENST00000345851 AHNAKQ09666 5890 aaKnown RBP3.13□□□□□ -1.91
TRIM3-201ENST00000345851 MUC16Q8WXI7 14507 aa2.06□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 11.8 ms