RNA–Protein interactions for RNA: ENST00000345080.4

LIN28B-201, Transcript of lin-28 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28B, Length 5,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-201ENST00000345080 MT1BP07438 61 aa2.64□□□□□ -1.99
LIN28B-201ENST00000345080 LCE3DQ9BYE3 92 aa2.63□□□□□ -1.99
LIN28B-201ENST00000345080 MT3P25713 68 aa2.61□□□□□ -1.99
LIN28B-201ENST00000345080 PRM1P04553 51 aa2.6□□□□□ -1.99
LIN28B-201ENST00000345080 LCE3EQ5T5B0 92 aa2.6□□□□□ -1.99
LIN28B-201ENST00000345080 KRTAP9-8Q9BYQ0 159 aa2.59□□□□□ -1.99
LIN28B-201ENST00000345080 KRTAP9-3Q9BYQ3 159 aa2.59□□□□□ -2
LIN28B-201ENST00000345080 OBSCNQ5VST9 7968 aa2.59□□□□□ -2
LIN28B-201ENST00000345080 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.58□□□□□ -2
LIN28B-201ENST00000345080 KRTAP2-2Q9BYT5 123 aa2.58□□□□□ -2
LIN28B-201ENST00000345080 KRTAP2-1Q9BYU5 128 aa2.58□□□□□ -2
LIN28B-201ENST00000345080 MT4P47944 62 aa2.55□□□□□ -2
LIN28B-201ENST00000345080 LCE4AQ5TA78 99 aa2.53□□□□□ -2
LIN28B-201ENST00000345080 KRTAP19-3Q7Z4W3 81 aa2.53□□□□□ -2
LIN28B-201ENST00000345080 LCE1AQ5T7P2 110 aa2.5□□□□□ -2.01
LIN28B-201ENST00000345080 LCE2AQ5TA79 106 aaPredicted RBP2.49□□□□□ -2.01
LIN28B-201ENST00000345080 MT1LQ93083 61 aa2.48□□□□□ -2.01
LIN28B-201ENST00000345080 MT1EP04732 61 aa2.45□□□□□ -2.02
LIN28B-201ENST00000345080 KRTAP4-7Q9BYR0 210 aa2.39□□□□□ -2.03
LIN28B-201ENST00000345080 KRTAP4-8A0A0G2JLE6 195 aa2.34□□□□□ -2.03
LIN28B-201ENST00000345080 MT1AP04731 61 aa2.34□□□□□ -2.03
LIN28B-201ENST00000345080 KRTAP4-8Q9BYQ9 185 aa2.34□□□□□ -2.03
LIN28B-201ENST00000345080 USH2AO75445 5202 aa2.34□□□□□ -2.04
LIN28B-201ENST00000345080 MT1MQ8N339 61 aa2.32□□□□□ -2.04
LIN28B-201ENST00000345080 LOC100996750A0A140TA64 210 aa2.31□□□□□ -2.04
LIN28B-201ENST00000345080 KRTAP4-6Q9BYQ5 205 aa2.31□□□□□ -2.04
LIN28B-201ENST00000345080 KRTAP9-9Q9BYP9 154 aa2.29□□□□□ -2.04
LIN28B-201ENST00000345080 KRTAP19-7Q3SYF9 63 aa2.28□□□□□ -2.04
LIN28B-201ENST00000345080 LCE5AQ5TCM9 118 aa2.28□□□□□ -2.04
LIN28B-201ENST00000345080 SYNE2Q8WXH0 6885 aaKnown RBP2.28□□□□□ -2.05
LIN28B-201ENST00000345080 KRTAP4-9Q9BYQ8 210 aa2.26□□□□□ -2.05
LIN28B-201ENST00000345080 LCE1DQ5T752 114 aa2.26□□□□□ -2.05
LIN28B-201ENST00000345080 LCE1BQ5T7P3 118 aa2.26□□□□□ -2.05
LIN28B-201ENST00000345080 MUC19Q7Z5P9 8384 aa2.26□□□□□ -2.05
LIN28B-201ENST00000345080 SSPOA2VEC9 5147 aa2.24□□□□□ -2.05
LIN28B-201ENST00000345080 KMT2DO14686 5537 aa2.17□□□□□ -2.06
LIN28B-201ENST00000345080 KRTAP9-6A8MVA2 160 aa2.16□□□□□ -2.06
LIN28B-201ENST00000345080 FSIP2Q5CZC0 6907 aa2.15□□□□□ -2.07
LIN28B-201ENST00000345080 NEBP20929 6669 aa2.14□□□□□ -2.07
LIN28B-201ENST00000345080 DSTQ03001 7570 aaKnown RBP2.14□□□□□ -2.07
LIN28B-201ENST00000345080 KRTAP6-2Q3LI66 62 aa2.13□□□□□ -2.07
LIN28B-201ENST00000345080 LCE1CQ5T751 118 aa2.13□□□□□ -2.07
LIN28B-201ENST00000345080 LCE1EQ5T753 118 aa2.13□□□□□ -2.07
LIN28B-201ENST00000345080 LCE1FQ5T754 118 aa2.13□□□□□ -2.07
LIN28B-201ENST00000345080 KRTAP4-3Q9BYR4 195 aa2.12□□□□□ -2.07
LIN28B-201ENST00000345080 FCGBPQ9Y6R7 5405 aaPredicted RBP2.08□□□□□ -2.08
LIN28B-201ENST00000345080 KRTAP9-4Q9BYQ2 154 aa2.05□□□□□ -2.08
LIN28B-201ENST00000345080 KRTAP5-9P26371 169 aa2.04□□□□□ -2.08
LIN28B-201ENST00000345080 MACF1Q9UPN3 7388 aaKnown RBP1.98□□□□□ -2.09
LIN28B-201ENST00000345080 KRTAP6-1Q3LI64 71 aa1.97□□□□□ -2.09
LIN28B-201ENST00000345080 MUC12Q9UKN1 5478 aa1.95□□□□□ -2.1
LIN28B-201ENST00000345080 KRTAP4-11Q9BYQ6 195 aa1.92□□□□□ -2.1
LIN28B-201ENST00000345080 MDN1Q9NU22 5596 aa1.92□□□□□ -2.1
LIN28B-201ENST00000345080 KRTAP5-4Q6L8H1 288 aa1.91□□□□□ -2.1
LIN28B-201ENST00000345080 KRTAP4-2Q9BYR5 136 aa1.84□□□□□ -2.11
LIN28B-201ENST00000345080 KRTAP5-3Q6L8H2 238 aa1.84□□□□□ -2.12
LIN28B-201ENST00000345080 KRTAP20-2Q3LI61 65 aa1.83□□□□□ -2.12
LIN28B-201ENST00000345080 KRTAP5-5Q701N2 237 aaPredicted RBP1.83□□□□□ -2.12
LIN28B-201ENST00000345080 GPR98Q8WXG9 6306 aa1.81□□□□□ -2.12
LIN28B-201ENST00000345080 KRTAP4-12Q9BQ66 201 aa1.79□□□□□ -2.12
LIN28B-201ENST00000345080 KRTAP4-4Q9BYR3 166 aa1.63□□□□□ -2.15
LIN28B-201ENST00000345080 KRTAP5-2Q701N4 177 aa1.6□□□□□ -2.15
LIN28B-201ENST00000345080 HMCN1Q96RW7 5635 aa1.57□□□□□ -2.16
LIN28B-201ENST00000345080 AHNAK2Q8IVF2 5795 aa1.52□□□□□ -2.17
LIN28B-201ENST00000345080 PHGR1C9JFL3 82 aa1.51□□□□□ -2.17
LIN28B-201ENST00000345080 MUC5ACP98088 5654 aa1.51□□□□□ -2.17
LIN28B-201ENST00000345080 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.48□□□□□ -2.17
LIN28B-201ENST00000345080 KRTAP5-7Q6L8G8 165 aa1.46□□□□□ -2.18
LIN28B-201ENST00000345080 AHNAKQ09666 5890 aaKnown RBP1.43□□□□□ -2.18
LIN28B-201ENST00000345080 KRTAP5-8O75690 187 aa1.42□□□□□ -2.18
LIN28B-201ENST00000345080 KRTAP5-10Q6L8G5 202 aa1.35□□□□□ -2.19
LIN28B-201ENST00000345080 KRTAP21-1Q3LI58 79 aa1.34□□□□□ -2.19
LIN28B-201ENST00000345080 MUC5BQ9HC84 5762 aaPredicted RBP1.29□□□□□ -2.2
LIN28B-201ENST00000345080 KRTAP5-1Q6L8H4 278 aa1.23□□□□□ -2.21
LIN28B-201ENST00000345080 KRTAP21-2Q3LI59 83 aa1.21□□□□□ -2.22
LIN28B-201ENST00000345080 KRTAP5-11Q6L8G4 156 aa1.18□□□□□ -2.22
LIN28B-201ENST00000345080 MUC16Q8WXI7 14507 aa0.77□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 118.4 ms