RNA–Protein interactions for RNA: ENST00000344749.9

TCF3-202, Transcript of transcription factor 3, humanhuman

TSL 5 BASIC

Gene TCF3, Length 4,289 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-202ENST00000344749 SPRR2EP22531 72 aa4.32□□□□□ -1.72
TCF3-202ENST00000344749 SPRR2BP35325 72 aa4.32□□□□□ -1.72
TCF3-202ENST00000344749 SPRR2AP35326 72 aa4.32□□□□□ -1.72
TCF3-202ENST00000344749 FCGBPQ9Y6R7 5405 aaPredicted RBP4.31□□□□□ -1.72
TCF3-202ENST00000344749 KRTAP19-7Q3SYF9 63 aa4.31□□□□□ -1.72
TCF3-202ENST00000344749 KRTAP4-3Q9BYR4 195 aa4.31□□□□□ -1.72
TCF3-202ENST00000344749 KRTAP19-3Q7Z4W3 81 aa4.3□□□□□ -1.72
TCF3-202ENST00000344749 KRTAP12-4P60329 112 aa4.29□□□□□ -1.72
TCF3-202ENST00000344749 LOC100996750A0A140TA64 210 aa4.27□□□□□ -1.73
TCF3-202ENST00000344749 KRTAP19-6Q3LI70 58 aa4.26□□□□□ -1.73
TCF3-202ENST00000344749 MT1MQ8N339 61 aa4.19□□□□□ -1.74
TCF3-202ENST00000344749 LCE2DQ5TA82 110 aaPredicted RBP4.18□□□□□ -1.74
TCF3-202ENST00000344749 SYNE2Q8WXH0 6885 aaKnown RBP4.16□□□□□ -1.74
TCF3-202ENST00000344749 SPRR2DP22532 72 aa4.14□□□□□ -1.75
TCF3-202ENST00000344749 KRTAP9-6A8MVA2 160 aa4.13□□□□□ -1.75
TCF3-202ENST00000344749 KRTAP9-2Q9BYQ4 174 aa4.09□□□□□ -1.75
TCF3-202ENST00000344749 MUC12Q9UKN1 5478 aa4.05□□□□□ -1.76
TCF3-202ENST00000344749 LCE3DQ9BYE3 92 aa4.04□□□□□ -1.76
TCF3-202ENST00000344749 SSPOA2VEC9 5147 aa3.98□□□□□ -1.77
TCF3-202ENST00000344749 LCE3EQ5T5B0 92 aa3.95□□□□□ -1.78
TCF3-202ENST00000344749 KRTAP4-9Q9BYQ8 210 aa3.95□□□□□ -1.78
TCF3-202ENST00000344749 KRTAP2-3P0C7H8 128 aa3.93□□□□□ -1.78
TCF3-202ENST00000344749 KRTAP2-4Q9BYR9 128 aa3.93□□□□□ -1.78
TCF3-202ENST00000344749 KRTAP2-1Q9BYU5 128 aa3.93□□□□□ -1.78
TCF3-202ENST00000344749 MACF1Q9UPN3 7388 aaKnown RBP3.86□□□□□ -1.79
TCF3-202ENST00000344749 LCE5AQ5TCM9 118 aa3.81□□□□□ -1.8
TCF3-202ENST00000344749 PRM1P04553 51 aa3.8□□□□□ -1.8
TCF3-202ENST00000344749 MT4P47944 62 aa3.79□□□□□ -1.8
TCF3-202ENST00000344749 MT1AP04731 61 aa3.78□□□□□ -1.8
TCF3-202ENST00000344749 KRTAP6-1Q3LI64 71 aa3.76□□□□□ -1.81
TCF3-202ENST00000344749 MT3P25713 68 aa3.74□□□□□ -1.81
TCF3-202ENST00000344749 KRTAP9-6A0A140TA67 174 aa3.73□□□□□ -1.81
TCF3-202ENST00000344749 LCE1AQ5T7P2 110 aa3.73□□□□□ -1.81
TCF3-202ENST00000344749 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.58□□□□□ -1.84
TCF3-202ENST00000344749 KRTAP6-2Q3LI66 62 aa3.58□□□□□ -1.84
TCF3-202ENST00000344749 LCE1DQ5T752 114 aa3.54□□□□□ -1.84
TCF3-202ENST00000344749 KRTAP6-3Q3LI67 103 aa3.53□□□□□ -1.84
TCF3-202ENST00000344749 KRTAP9-7A8MTY7 169 aa3.52□□□□□ -1.85
TCF3-202ENST00000344749 LCE1BQ5T7P3 118 aa3.51□□□□□ -1.85
TCF3-202ENST00000344749 MDN1Q9NU22 5596 aa3.51□□□□□ -1.85
TCF3-202ENST00000344749 KRTAP9-4Q9BYQ2 154 aa3.5□□□□□ -1.85
TCF3-202ENST00000344749 MUC19Q7Z5P9 8384 aa3.42□□□□□ -1.86
TCF3-202ENST00000344749 KRTAP5-9P26371 169 aa3.38□□□□□ -1.87
TCF3-202ENST00000344749 KRTAP20-1Q3LI63 56 aa3.28□□□□□ -1.88
TCF3-202ENST00000344749 NEBP20929 6669 aa3.24□□□□□ -1.89
TCF3-202ENST00000344749 LCE4AQ5TA78 99 aa3.22□□□□□ -1.89
TCF3-202ENST00000344749 KRTAP2-2Q9BYT5 123 aa3.22□□□□□ -1.89
TCF3-202ENST00000344749 KRTAP4-6Q9BYQ5 205 aa3.22□□□□□ -1.89
TCF3-202ENST00000344749 LCE1EQ5T753 118 aa3.12□□□□□ -1.91
TCF3-202ENST00000344749 KRTAP5-5Q701N2 237 aaPredicted RBP3.05□□□□□ -1.92
TCF3-202ENST00000344749 KRTAP20-2Q3LI61 65 aa3.04□□□□□ -1.92
TCF3-202ENST00000344749 GPR98Q8WXG9 6306 aa2.99□□□□□ -1.93
TCF3-202ENST00000344749 MUC5ACP98088 5654 aa2.92□□□□□ -1.94
TCF3-202ENST00000344749 KRTAP4-11Q9BYQ6 195 aa2.86□□□□□ -1.95
TCF3-202ENST00000344749 HMCN1Q96RW7 5635 aa2.78□□□□□ -1.96
TCF3-202ENST00000344749 LCE1CQ5T751 118 aa2.75□□□□□ -1.97
TCF3-202ENST00000344749 LCE1FQ5T754 118 aa2.75□□□□□ -1.97
TCF3-202ENST00000344749 KRTAP5-4Q6L8H1 288 aa2.74□□□□□ -1.97
TCF3-202ENST00000344749 KRTAP9-9Q9BYP9 154 aa2.71□□□□□ -1.98
TCF3-202ENST00000344749 KRTAP4-4Q9BYR3 166 aa2.68□□□□□ -1.98
TCF3-202ENST00000344749 KRTAP4-12Q9BQ66 201 aa2.62□□□□□ -1.99
TCF3-202ENST00000344749 KRTAP4-2Q9BYR5 136 aa2.62□□□□□ -1.99
TCF3-202ENST00000344749 AHNAK2Q8IVF2 5795 aa2.49□□□□□ -2.01
TCF3-202ENST00000344749 KRTAP5-2Q701N4 177 aa2.48□□□□□ -2.01
TCF3-202ENST00000344749 KRTAP5-3Q6L8H2 238 aa2.47□□□□□ -2.01
TCF3-202ENST00000344749 KRTAP5-10Q6L8G5 202 aa2.37□□□□□ -2.03
TCF3-202ENST00000344749 KRTAP5-8O75690 187 aa2.33□□□□□ -2.04
TCF3-202ENST00000344749 MUC5BQ9HC84 5762 aaPredicted RBP2.23□□□□□ -2.05
TCF3-202ENST00000344749 KRTAP5-1Q6L8H4 278 aa2.22□□□□□ -2.05
TCF3-202ENST00000344749 KRTAP21-2Q3LI59 83 aa2.11□□□□□ -2.07
TCF3-202ENST00000344749 AHNAKQ09666 5890 aaKnown RBP2.1□□□□□ -2.07
TCF3-202ENST00000344749 KRTAP5-11Q6L8G4 156 aa2.03□□□□□ -2.09
TCF3-202ENST00000344749 KRTAP5-7Q6L8G8 165 aa1.99□□□□□ -2.09
TCF3-202ENST00000344749 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.92□□□□□ -2.1
TCF3-202ENST00000344749 KRTAP21-1Q3LI58 79 aa1.84□□□□□ -2.12
TCF3-202ENST00000344749 PHGR1C9JFL3 82 aa1.73□□□□□ -2.13
TCF3-202ENST00000344749 MUC16Q8WXI7 14507 aa1.2□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 9.8 ms