RNA–Protein interactions for RNA: ENST00000344404.10

TRIOBP-202, Transcript of TRIO and F-actin binding protein, humanhuman

TSL 2

Gene TRIOBP, Length 7,300 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-202ENST00000344404 KRTAP9-7A8MTY7 169 aa3.79□□□□□ -1.8
TRIOBP-202ENST00000344404 MT1EP04732 61 aa3.78□□□□□ -1.81
TRIOBP-202ENST00000344404 MT1MQ8N339 61 aa3.72□□□□□ -1.81
TRIOBP-202ENST00000344404 LCE1CQ5T751 118 aa3.7□□□□□ -1.82
TRIOBP-202ENST00000344404 LCE1EQ5T753 118 aa3.7□□□□□ -1.82
TRIOBP-202ENST00000344404 LCE1FQ5T754 118 aa3.7□□□□□ -1.82
TRIOBP-202ENST00000344404 LCE1AQ5T7P2 110 aa3.7□□□□□ -1.82
TRIOBP-202ENST00000344404 MUC17Q685J3 4493 aa3.67□□□□□ -1.82
TRIOBP-202ENST00000344404 FSIP2Q5CZC0 6907 aa3.53□□□□□ -1.84
TRIOBP-202ENST00000344404 KRTAP19-2Q3LHN2 52 aa3.52□□□□□ -1.85
TRIOBP-202ENST00000344404 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.51□□□□□ -1.85
TRIOBP-202ENST00000344404 KRTAP2-3P0C7H8 128 aa3.5□□□□□ -1.85
TRIOBP-202ENST00000344404 KRTAP2-4Q9BYR9 128 aa3.5□□□□□ -1.85
TRIOBP-202ENST00000344404 HERC2O95714 4834 aa3.49□□□□□ -1.85
TRIOBP-202ENST00000344404 KMT2CQ8NEZ4 4911 aaKnown RBP3.48□□□□□ -1.85
TRIOBP-202ENST00000344404 KRTAP6-2Q3LI66 62 aa3.43□□□□□ -1.86
TRIOBP-202ENST00000344404 KRTAP2-1Q9BYU5 128 aa3.4□□□□□ -1.86
TRIOBP-202ENST00000344404 LCE2AQ5TA79 106 aaPredicted RBP3.4□□□□□ -1.87
TRIOBP-202ENST00000344404 LCE4AQ5TA78 99 aa3.39□□□□□ -1.87
TRIOBP-202ENST00000344404 KIAA1109Q2LD37 5005 aa3.38□□□□□ -1.87
TRIOBP-202ENST00000344404 BIRC6Q9NR09 4857 aa3.36□□□□□ -1.87
TRIOBP-202ENST00000344404 RYR2Q92736 4967 aa3.36□□□□□ -1.87
TRIOBP-202ENST00000344404 MT1AP04731 61 aa3.36□□□□□ -1.87
TRIOBP-202ENST00000344404 KRTAP6-3Q3LI67 103 aa3.35□□□□□ -1.87
TRIOBP-202ENST00000344404 KRTAP2-2Q9BYT5 123 aa3.35□□□□□ -1.87
TRIOBP-202ENST00000344404 KRTAP6-1Q3LI64 71 aa3.31□□□□□ -1.88
TRIOBP-202ENST00000344404 KRTAP19-7Q3SYF9 63 aa3.28□□□□□ -1.88
TRIOBP-202ENST00000344404 PCLOQ9Y6V0 5065 aa3.28□□□□□ -1.88
TRIOBP-202ENST00000344404 HMCN2Q8NDA2 5059 aa3.28□□□□□ -1.88
TRIOBP-202ENST00000344404 HERC1Q15751 4861 aa3.27□□□□□ -1.89
TRIOBP-202ENST00000344404 KRTAP9-9Q9BYP9 154 aa3.21□□□□□ -1.9
TRIOBP-202ENST00000344404 SYNE1Q8NF91 8797 aaKnown RBP3.21□□□□□ -1.9
TRIOBP-202ENST00000344404 KRTAP9-4Q9BYQ2 154 aa3.2□□□□□ -1.9
TRIOBP-202ENST00000344404 EPPK1P58107 5090 aaKnown RBP3.09□□□□□ -1.91
TRIOBP-202ENST00000344404 MUC2Q02817 5179 aa3.07□□□□□ -1.92
TRIOBP-202ENST00000344404 OBSCNQ5VST9 7968 aa3.03□□□□□ -1.92
TRIOBP-202ENST00000344404 KRTAP4-6Q9BYQ5 205 aa3.03□□□□□ -1.92
TRIOBP-202ENST00000344404 KRTAP20-2Q3LI61 65 aa3.03□□□□□ -1.92
TRIOBP-202ENST00000344404 FAT4Q6V0I7 4981 aa3.03□□□□□ -1.93
TRIOBP-202ENST00000344404 KRTAP9-6A8MVA2 160 aa3.01□□□□□ -1.93
TRIOBP-202ENST00000344404 KRTAP4-12Q9BQ66 201 aa2.96□□□□□ -1.94
TRIOBP-202ENST00000344404 KRTAP4-2Q9BYR5 136 aa2.96□□□□□ -1.94
TRIOBP-202ENST00000344404 KRTAP4-11Q9BYQ6 195 aa2.95□□□□□ -1.94
TRIOBP-202ENST00000344404 KRTAP4-4Q9BYR3 166 aa2.93□□□□□ -1.94
TRIOBP-202ENST00000344404 ABCA13Q86UQ4 5058 aa2.91□□□□□ -1.94
TRIOBP-202ENST00000344404 KMT2DO14686 5537 aa2.9□□□□□ -1.95
TRIOBP-202ENST00000344404 UBR4Q5T4S7 5183 aa2.84□□□□□ -1.96
TRIOBP-202ENST00000344404 DSTQ03001 7570 aaKnown RBP2.82□□□□□ -1.96
TRIOBP-202ENST00000344404 FCGBPQ9Y6R7 5405 aaPredicted RBP2.77□□□□□ -1.97
TRIOBP-202ENST00000344404 RNF213Q63HN8 5207 aa2.74□□□□□ -1.97
TRIOBP-202ENST00000344404 MACF1Q9UPN3 7388 aaKnown RBP2.71□□□□□ -1.98
TRIOBP-202ENST00000344404 KRTAP5-9P26371 169 aa2.54□□□□□ -2
TRIOBP-202ENST00000344404 NEBP20929 6669 aa2.53□□□□□ -2
TRIOBP-202ENST00000344404 MUC19Q7Z5P9 8384 aa2.52□□□□□ -2.01
TRIOBP-202ENST00000344404 USH2AO75445 5202 aa2.47□□□□□ -2.01
TRIOBP-202ENST00000344404 SSPOA2VEC9 5147 aa2.43□□□□□ -2.02
TRIOBP-202ENST00000344404 KRTAP5-4Q6L8H1 288 aa2.42□□□□□ -2.02
TRIOBP-202ENST00000344404 KRTAP5-5Q701N2 237 aaPredicted RBP2.35□□□□□ -2.03
TRIOBP-202ENST00000344404 MUC12Q9UKN1 5478 aa2.29□□□□□ -2.04
TRIOBP-202ENST00000344404 KRTAP5-3Q6L8H2 238 aa2.25□□□□□ -2.05
TRIOBP-202ENST00000344404 PHGR1C9JFL3 82 aa2.25□□□□□ -2.05
TRIOBP-202ENST00000344404 GPR98Q8WXG9 6306 aa2.16□□□□□ -2.06
TRIOBP-202ENST00000344404 MDN1Q9NU22 5596 aa2.15□□□□□ -2.07
TRIOBP-202ENST00000344404 KRTAP5-8O75690 187 aa2.12□□□□□ -2.07
TRIOBP-202ENST00000344404 MUC5ACP98088 5654 aa1.93□□□□□ -2.1
TRIOBP-202ENST00000344404 HMCN1Q96RW7 5635 aa1.77□□□□□ -2.13
TRIOBP-202ENST00000344404 KRTAP5-2Q701N4 177 aa1.77□□□□□ -2.13
TRIOBP-202ENST00000344404 KRTAP5-10Q6L8G5 202 aa1.7□□□□□ -2.14
TRIOBP-202ENST00000344404 KRTAP5-1Q6L8H4 278 aa1.64□□□□□ -2.15
TRIOBP-202ENST00000344404 MUC5BQ9HC84 5762 aaPredicted RBP1.56□□□□□ -2.16
TRIOBP-202ENST00000344404 AHNAK2Q8IVF2 5795 aa1.52□□□□□ -2.17
TRIOBP-202ENST00000344404 KRTAP5-11Q6L8G4 156 aa1.48□□□□□ -2.17
TRIOBP-202ENST00000344404 KRTAP21-1Q3LI58 79 aa1.44□□□□□ -2.18
TRIOBP-202ENST00000344404 KRTAP21-2Q3LI59 83 aa1.43□□□□□ -2.18
TRIOBP-202ENST00000344404 AHNAKQ09666 5890 aaKnown RBP1.42□□□□□ -2.18
TRIOBP-202ENST00000344404 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.36□□□□□ -2.19
TRIOBP-202ENST00000344404 KRTAP5-7Q6L8G8 165 aa1.31□□□□□ -2.2
TRIOBP-202ENST00000344404 MUC16Q8WXI7 14507 aa1.26□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 55.1 ms