RNA–Protein interactions for RNA: ENST00000343638.9

UBTF-202, Transcript of upstream binding transcription factor, humanhuman

TSL 1 (best) BASIC

Gene UBTF, Length 4,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBTF-202ENST00000343638 KRTAP4-7Q9BYR0 210 aa6.38□□□□□ -1.39
UBTF-202ENST00000343638 KRTAP19-7Q3SYF9 63 aa6.29□□□□□ -1.4
UBTF-202ENST00000343638 SPRR2DP22532 72 aa6.24□□□□□ -1.41
UBTF-202ENST00000343638 MT1MQ8N339 61 aa6.17□□□□□ -1.42
UBTF-202ENST00000343638 USH2AO75445 5202 aa6.15□□□□□ -1.43
UBTF-202ENST00000343638 LCE3BQ5TA77 95 aa6.14□□□□□ -1.43
UBTF-202ENST00000343638 KRTAP4-3Q9BYR4 195 aa6.05□□□□□ -1.44
UBTF-202ENST00000343638 LOC100996750A0A140TA64 210 aa5.96□□□□□ -1.46
UBTF-202ENST00000343638 SYNE1Q8NF91 8797 aaKnown RBP5.96□□□□□ -1.46
UBTF-202ENST00000343638 KRTAP12-4P60329 112 aa5.95□□□□□ -1.46
UBTF-202ENST00000343638 KRTAP9-6A0A140TA67 174 aa5.89□□□□□ -1.47
UBTF-202ENST00000343638 KMT2DO14686 5537 aa5.81□□□□□ -1.48
UBTF-202ENST00000343638 KRTAP9-6A8MVA2 160 aa5.77□□□□□ -1.49
UBTF-202ENST00000343638 LCE3DQ9BYE3 92 aa5.76□□□□□ -1.49
UBTF-202ENST00000343638 LCE5AQ5TCM9 118 aa5.73□□□□□ -1.49
UBTF-202ENST00000343638 SSPOA2VEC9 5147 aa5.72□□□□□ -1.49
UBTF-202ENST00000343638 FCGBPQ9Y6R7 5405 aaPredicted RBP5.68□□□□□ -1.5
UBTF-202ENST00000343638 LCE1AQ5T7P2 110 aa5.68□□□□□ -1.5
UBTF-202ENST00000343638 DSTQ03001 7570 aaKnown RBP5.66□□□□□ -1.5
UBTF-202ENST00000343638 KRTAP6-3Q3LI67 103 aa5.66□□□□□ -1.5
UBTF-202ENST00000343638 KRTAP2-3P0C7H8 128 aa5.65□□□□□ -1.5
UBTF-202ENST00000343638 KRTAP2-4Q9BYR9 128 aa5.65□□□□□ -1.5
UBTF-202ENST00000343638 KRTAP2-1Q9BYU5 128 aa5.65□□□□□ -1.5
UBTF-202ENST00000343638 LCE3EQ5T5B0 92 aa5.65□□□□□ -1.51
UBTF-202ENST00000343638 MT1AP04731 61 aa5.62□□□□□ -1.51
UBTF-202ENST00000343638 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.62□□□□□ -1.51
UBTF-202ENST00000343638 SYNE2Q8WXH0 6885 aaKnown RBP5.57□□□□□ -1.52
UBTF-202ENST00000343638 MT3P25713 68 aa5.56□□□□□ -1.52
UBTF-202ENST00000343638 KRTAP9-7A8MTY7 169 aa5.54□□□□□ -1.52
UBTF-202ENST00000343638 MACF1Q9UPN3 7388 aaKnown RBP5.52□□□□□ -1.53
UBTF-202ENST00000343638 MT4P47944 62 aa5.51□□□□□ -1.53
UBTF-202ENST00000343638 MUC12Q9UKN1 5478 aa5.5□□□□□ -1.53
UBTF-202ENST00000343638 OBSCNQ5VST9 7968 aa5.44□□□□□ -1.54
UBTF-202ENST00000343638 KRTAP6-1Q3LI64 71 aa5.41□□□□□ -1.54
UBTF-202ENST00000343638 KRTAP4-9Q9BYQ8 210 aa5.37□□□□□ -1.55
UBTF-202ENST00000343638 KRTAP5-9P26371 169 aa5.34□□□□□ -1.55
UBTF-202ENST00000343638 KRTAP9-4Q9BYQ2 154 aa5.22□□□□□ -1.57
UBTF-202ENST00000343638 KRTAP20-1Q3LI63 56 aa5.21□□□□□ -1.58
UBTF-202ENST00000343638 KRTAP6-2Q3LI66 62 aa5.17□□□□□ -1.58
UBTF-202ENST00000343638 KRTAP2-2Q9BYT5 123 aa5.11□□□□□ -1.59
UBTF-202ENST00000343638 LCE4AQ5TA78 99 aa5.11□□□□□ -1.59
UBTF-202ENST00000343638 PRM1P04553 51 aa5.09□□□□□ -1.6
UBTF-202ENST00000343638 MDN1Q9NU22 5596 aa5.05□□□□□ -1.6
UBTF-202ENST00000343638 LCE1DQ5T752 114 aa5.05□□□□□ -1.6
UBTF-202ENST00000343638 LCE1BQ5T7P3 118 aa4.97□□□□□ -1.61
UBTF-202ENST00000343638 NEBP20929 6669 aa4.86□□□□□ -1.63
UBTF-202ENST00000343638 KRTAP4-6Q9BYQ5 205 aa4.71□□□□□ -1.66
UBTF-202ENST00000343638 KRTAP5-5Q701N2 237 aaPredicted RBP4.63□□□□□ -1.67
UBTF-202ENST00000343638 KRTAP20-2Q3LI61 65 aa4.61□□□□□ -1.67
UBTF-202ENST00000343638 KRTAP5-4Q6L8H1 288 aa4.34□□□□□ -1.71
UBTF-202ENST00000343638 KRTAP4-11Q9BYQ6 195 aa4.08□□□□□ -1.76
UBTF-202ENST00000343638 KRTAP9-9Q9BYP9 154 aa4.07□□□□□ -1.76
UBTF-202ENST00000343638 LCE1EQ5T753 118 aa4.05□□□□□ -1.76
UBTF-202ENST00000343638 GPR98Q8WXG9 6306 aa4.04□□□□□ -1.76
UBTF-202ENST00000343638 MUC19Q7Z5P9 8384 aa4.04□□□□□ -1.76
UBTF-202ENST00000343638 HMCN1Q96RW7 5635 aa3.98□□□□□ -1.77
UBTF-202ENST00000343638 MUC5ACP98088 5654 aa3.95□□□□□ -1.78
UBTF-202ENST00000343638 LCE1CQ5T751 118 aa3.94□□□□□ -1.78
UBTF-202ENST00000343638 LCE1FQ5T754 118 aa3.94□□□□□ -1.78
UBTF-202ENST00000343638 KRTAP5-2Q701N4 177 aa3.89□□□□□ -1.79
UBTF-202ENST00000343638 KRTAP5-3Q6L8H2 238 aa3.86□□□□□ -1.79
UBTF-202ENST00000343638 KRTAP4-12Q9BQ66 201 aa3.67□□□□□ -1.82
UBTF-202ENST00000343638 KRTAP4-2Q9BYR5 136 aa3.67□□□□□ -1.82
UBTF-202ENST00000343638 KRTAP4-4Q9BYR3 166 aa3.64□□□□□ -1.83
UBTF-202ENST00000343638 AHNAK2Q8IVF2 5795 aa3.62□□□□□ -1.83
UBTF-202ENST00000343638 KRTAP5-8O75690 187 aa3.54□□□□□ -1.84
UBTF-202ENST00000343638 KRTAP5-10Q6L8G5 202 aa3.41□□□□□ -1.86
UBTF-202ENST00000343638 KRTAP5-1Q6L8H4 278 aa3.4□□□□□ -1.87
UBTF-202ENST00000343638 KRTAP5-11Q6L8G4 156 aa3.17□□□□□ -1.9
UBTF-202ENST00000343638 KRTAP21-2Q3LI59 83 aa3.12□□□□□ -1.91
UBTF-202ENST00000343638 MUC5BQ9HC84 5762 aaPredicted RBP3.12□□□□□ -1.91
UBTF-202ENST00000343638 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.07□□□□□ -1.92
UBTF-202ENST00000343638 AHNAKQ09666 5890 aaKnown RBP3.02□□□□□ -1.93
UBTF-202ENST00000343638 KRTAP5-7Q6L8G8 165 aa2.96□□□□□ -1.94
UBTF-202ENST00000343638 PHGR1C9JFL3 82 aa2.68□□□□□ -1.98
UBTF-202ENST00000343638 KRTAP21-1Q3LI58 79 aa2.5□□□□□ -2.01
UBTF-202ENST00000343638 MUC16Q8WXI7 14507 aa1.76□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 18 ms