RNA–Protein interactions for RNA: ENST00000343533.9

ATP7A-202, Transcript of ATPase copper transporting alpha, humanhuman

TSL 5 BASIC

Gene ATP7A, Length 8,289 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7A-202ENST00000343533 MUC17Q685J3 4493 aa1.72□□□□□ -2.13
ATP7A-202ENST00000343533 KRTAP4-9Q9BYQ8 210 aa1.71□□□□□ -2.13
ATP7A-202ENST00000343533 USH2AO75445 5202 aa1.71□□□□□ -2.14
ATP7A-202ENST00000343533 MT1XP80297 61 aa1.7□□□□□ -2.14
ATP7A-202ENST00000343533 LCE1DQ5T752 114 aa1.7□□□□□ -2.14
ATP7A-202ENST00000343533 KMT2DO14686 5537 aa1.69□□□□□ -2.14
ATP7A-202ENST00000343533 KRTAP9-8Q9BYQ0 159 aa1.69□□□□□ -2.14
ATP7A-202ENST00000343533 FLGP20930 4061 aaPredicted RBP1.66□□□□□ -2.14
ATP7A-202ENST00000343533 MT1BP07438 61 aa1.66□□□□□ -2.14
ATP7A-202ENST00000343533 KRTAP19-6Q3LI70 58 aa1.65□□□□□ -2.15
ATP7A-202ENST00000343533 KRTAP20-1Q3LI63 56 aa1.64□□□□□ -2.15
ATP7A-202ENST00000343533 KRTAP9-3Q9BYQ3 159 aa1.64□□□□□ -2.15
ATP7A-202ENST00000343533 LCE5AQ5TCM9 118 aa1.64□□□□□ -2.15
ATP7A-202ENST00000343533 LCE3EQ5T5B0 92 aa1.62□□□□□ -2.15
ATP7A-202ENST00000343533 KRTAP9-7A8MTY7 169 aa1.62□□□□□ -2.15
ATP7A-202ENST00000343533 KRTAP19-2Q3LHN2 52 aa1.6□□□□□ -2.15
ATP7A-202ENST00000343533 LCE3DQ9BYE3 92 aa1.59□□□□□ -2.16
ATP7A-202ENST00000343533 KRTAP19-3Q7Z4W3 81 aa1.57□□□□□ -2.16
ATP7A-202ENST00000343533 LCE1CQ5T751 118 aa1.56□□□□□ -2.16
ATP7A-202ENST00000343533 LCE1EQ5T753 118 aa1.56□□□□□ -2.16
ATP7A-202ENST00000343533 LCE1FQ5T754 118 aa1.56□□□□□ -2.16
ATP7A-202ENST00000343533 LCE1AQ5T7P2 110 aa1.56□□□□□ -2.16
ATP7A-202ENST00000343533 KRTAP19-8Q3LI54 63 aa1.55□□□□□ -2.16
ATP7A-202ENST00000343533 PRM1P04553 51 aa1.52□□□□□ -2.17
ATP7A-202ENST00000343533 MT1LQ93083 61 aa1.52□□□□□ -2.17
ATP7A-202ENST00000343533 MT1EP04732 61 aa1.51□□□□□ -2.17
ATP7A-202ENST00000343533 MDN1Q9NU22 5596 aa1.5□□□□□ -2.17
ATP7A-202ENST00000343533 MT1MQ8N339 61 aa1.5□□□□□ -2.17
ATP7A-202ENST00000343533 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.5□□□□□ -2.17
ATP7A-202ENST00000343533 MACF1Q9UPN3 7388 aaKnown RBP1.48□□□□□ -2.17
ATP7A-202ENST00000343533 FCGBPQ9Y6R7 5405 aaPredicted RBP1.47□□□□□ -2.17
ATP7A-202ENST00000343533 KRTAP6-2Q3LI66 62 aa1.43□□□□□ -2.18
ATP7A-202ENST00000343533 MUC12Q9UKN1 5478 aa1.42□□□□□ -2.18
ATP7A-202ENST00000343533 KRTAP2-3P0C7H8 128 aa1.42□□□□□ -2.18
ATP7A-202ENST00000343533 KRTAP2-4Q9BYR9 128 aa1.42□□□□□ -2.18
ATP7A-202ENST00000343533 KRTAP4-6Q9BYQ5 205 aa1.41□□□□□ -2.18
ATP7A-202ENST00000343533 KRTAP9-9Q9BYP9 154 aa1.4□□□□□ -2.18
ATP7A-202ENST00000343533 KRTAP9-4Q9BYQ2 154 aa1.4□□□□□ -2.18
ATP7A-202ENST00000343533 DSTQ03001 7570 aaKnown RBP1.4□□□□□ -2.19
ATP7A-202ENST00000343533 KRTAP6-1Q3LI64 71 aa1.38□□□□□ -2.19
ATP7A-202ENST00000343533 KRTAP4-12Q9BQ66 201 aa1.38□□□□□ -2.19
ATP7A-202ENST00000343533 LCE4AQ5TA78 99 aa1.37□□□□□ -2.19
ATP7A-202ENST00000343533 KRTAP2-2Q9BYT5 123 aa1.35□□□□□ -2.19
ATP7A-202ENST00000343533 KRTAP2-1Q9BYU5 128 aa1.35□□□□□ -2.19
ATP7A-202ENST00000343533 KRTAP4-2Q9BYR5 136 aa1.35□□□□□ -2.19
ATP7A-202ENST00000343533 KRTAP6-3Q3LI67 103 aa1.34□□□□□ -2.19
ATP7A-202ENST00000343533 MUC5BQ9HC84 5762 aaPredicted RBP1.34□□□□□ -2.2
ATP7A-202ENST00000343533 KRTAP4-4Q9BYR3 166 aa1.33□□□□□ -2.2
ATP7A-202ENST00000343533 KRTAP20-2Q3LI61 65 aa1.32□□□□□ -2.2
ATP7A-202ENST00000343533 KRTAP19-7Q3SYF9 63 aa1.31□□□□□ -2.2
ATP7A-202ENST00000343533 HMCN1Q96RW7 5635 aa1.28□□□□□ -2.2
ATP7A-202ENST00000343533 MT1AP04731 61 aa1.28□□□□□ -2.2
ATP7A-202ENST00000343533 OBSCNQ5VST9 7968 aa1.27□□□□□ -2.21
ATP7A-202ENST00000343533 KRTAP9-6A8MVA2 160 aa1.22□□□□□ -2.21
ATP7A-202ENST00000343533 KRTAP4-11Q9BYQ6 195 aa1.22□□□□□ -2.21
ATP7A-202ENST00000343533 GPR98Q8WXG9 6306 aa1.22□□□□□ -2.21
ATP7A-202ENST00000343533 SYNE1Q8NF91 8797 aaKnown RBP1.2□□□□□ -2.22
ATP7A-202ENST00000343533 KRTAP5-2Q701N4 177 aa1.19□□□□□ -2.22
ATP7A-202ENST00000343533 NEBP20929 6669 aa1.18□□□□□ -2.22
ATP7A-202ENST00000343533 KRTAP5-9P26371 169 aa1.13□□□□□ -2.23
ATP7A-202ENST00000343533 AHNAK2Q8IVF2 5795 aa1.12□□□□□ -2.23
ATP7A-202ENST00000343533 KRTAP5-5Q701N2 237 aaPredicted RBP1□□□□□ -2.25
ATP7A-202ENST00000343533 PHGR1C9JFL3 82 aa0.97□□□□□ -2.25
ATP7A-202ENST00000343533 KRTAP5-4Q6L8H1 288 aa0.95□□□□□ -2.26
ATP7A-202ENST00000343533 KRTAP5-3Q6L8H2 238 aa0.94□□□□□ -2.26
ATP7A-202ENST00000343533 MUC5ACP98088 5654 aa0.93□□□□□ -2.26
ATP7A-202ENST00000343533 KRTAP5-8O75690 187 aa0.91□□□□□ -2.26
ATP7A-202ENST00000343533 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.89□□□□□ -2.27
ATP7A-202ENST00000343533 KRTAP5-10Q6L8G5 202 aa0.85□□□□□ -2.27
ATP7A-202ENST00000343533 AHNAKQ09666 5890 aaKnown RBP0.84□□□□□ -2.27
ATP7A-202ENST00000343533 MUC19Q7Z5P9 8384 aa0.79□□□□□ -2.28
ATP7A-202ENST00000343533 KRTAP5-1Q6L8H4 278 aa0.77□□□□□ -2.29
ATP7A-202ENST00000343533 KRTAP5-7Q6L8G8 165 aa0.75□□□□□ -2.29
ATP7A-202ENST00000343533 KRTAP5-11Q6L8G4 156 aa0.74□□□□□ -2.29
ATP7A-202ENST00000343533 KRTAP21-1Q3LI58 79 aa0.64□□□□□ -2.31
ATP7A-202ENST00000343533 KRTAP21-2Q3LI59 83 aa0.6□□□□□ -2.31
ATP7A-202ENST00000343533 MUC16Q8WXI7 14507 aa0.56□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 63.7 ms