RNA–Protein interactions for RNA: ENST00000343304.10

LRRC41-201, Transcript of leucine rich repeat containing 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC41, Length 2,947 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC41-201ENST00000343304 FCGBPQ9Y6R7 5405 aaPredicted RBP5.11□□□□□ -1.59
LRRC41-201ENST00000343304 KRTAP2-3P0C7H8 128 aa5.08□□□□□ -1.6
LRRC41-201ENST00000343304 KRTAP2-4Q9BYR9 128 aa5.08□□□□□ -1.6
LRRC41-201ENST00000343304 KRTAP2-1Q9BYU5 128 aa5.08□□□□□ -1.6
LRRC41-201ENST00000343304 DSTQ03001 7570 aaKnown RBP5.05□□□□□ -1.6
LRRC41-201ENST00000343304 MUC12Q9UKN1 5478 aa4.98□□□□□ -1.61
LRRC41-201ENST00000343304 KRTAP9-6A0A140TA67 174 aa4.95□□□□□ -1.62
LRRC41-201ENST00000343304 KRTAP5-9P26371 169 aa4.92□□□□□ -1.62
LRRC41-201ENST00000343304 MT1GP13640 62 aa4.81□□□□□ -1.64
LRRC41-201ENST00000343304 KRTAP19-3Q7Z4W3 81 aa4.81□□□□□ -1.64
LRRC41-201ENST00000343304 KRTAP6-3Q3LI67 103 aa4.81□□□□□ -1.64
LRRC41-201ENST00000343304 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.8□□□□□ -1.64
LRRC41-201ENST00000343304 MACF1Q9UPN3 7388 aaKnown RBP4.79□□□□□ -1.64
LRRC41-201ENST00000343304 SPRR2FQ96RM1 72 aa4.79□□□□□ -1.64
LRRC41-201ENST00000343304 MT1MQ8N339 61 aa4.78□□□□□ -1.64
LRRC41-201ENST00000343304 LOC100996750A0A140TA64 210 aa4.77□□□□□ -1.65
LRRC41-201ENST00000343304 KRTAP4-3Q9BYR4 195 aa4.77□□□□□ -1.65
LRRC41-201ENST00000343304 LCE5AQ5TCM9 118 aa4.74□□□□□ -1.65
LRRC41-201ENST00000343304 SYNE1Q8NF91 8797 aaKnown RBP4.7□□□□□ -1.66
LRRC41-201ENST00000343304 LCE1AQ5T7P2 110 aa4.69□□□□□ -1.66
LRRC41-201ENST00000343304 SYNE2Q8WXH0 6885 aaKnown RBP4.68□□□□□ -1.66
LRRC41-201ENST00000343304 OBSCNQ5VST9 7968 aa4.66□□□□□ -1.66
LRRC41-201ENST00000343304 SPRR2EP22531 72 aa4.57□□□□□ -1.68
LRRC41-201ENST00000343304 SPRR2BP35325 72 aa4.57□□□□□ -1.68
LRRC41-201ENST00000343304 SPRR2AP35326 72 aa4.57□□□□□ -1.68
LRRC41-201ENST00000343304 MDN1Q9NU22 5596 aa4.55□□□□□ -1.68
LRRC41-201ENST00000343304 KRTAP9-7A8MTY7 169 aa4.52□□□□□ -1.69
LRRC41-201ENST00000343304 KRTAP12-4P60329 112 aa4.45□□□□□ -1.7
LRRC41-201ENST00000343304 KRTAP4-9Q9BYQ8 210 aa4.43□□□□□ -1.7
LRRC41-201ENST00000343304 SPRR2DP22532 72 aa4.42□□□□□ -1.7
LRRC41-201ENST00000343304 MT1AP04731 61 aa4.37□□□□□ -1.71
LRRC41-201ENST00000343304 LCE3BQ5TA77 95 aa4.36□□□□□ -1.71
LRRC41-201ENST00000343304 NEBP20929 6669 aa4.34□□□□□ -1.72
LRRC41-201ENST00000343304 KRTAP6-1Q3LI64 71 aa4.32□□□□□ -1.72
LRRC41-201ENST00000343304 KRTAP5-5Q701N2 237 aaPredicted RBP4.3□□□□□ -1.72
LRRC41-201ENST00000343304 LCE3DQ9BYE3 92 aa4.19□□□□□ -1.74
LRRC41-201ENST00000343304 LCE3EQ5T5B0 92 aa4.15□□□□□ -1.75
LRRC41-201ENST00000343304 KRTAP5-4Q6L8H1 288 aa4.13□□□□□ -1.75
LRRC41-201ENST00000343304 KRTAP2-2Q9BYT5 123 aa4.1□□□□□ -1.75
LRRC41-201ENST00000343304 KRTAP9-4Q9BYQ2 154 aa4.08□□□□□ -1.76
LRRC41-201ENST00000343304 LCE4AQ5TA78 99 aa4.07□□□□□ -1.76
LRRC41-201ENST00000343304 KRTAP20-1Q3LI63 56 aa4.05□□□□□ -1.76
LRRC41-201ENST00000343304 PRM1P04553 51 aa3.94□□□□□ -1.78
LRRC41-201ENST00000343304 MT3P25713 68 aa3.9□□□□□ -1.79
LRRC41-201ENST00000343304 KRTAP6-2Q3LI66 62 aa3.87□□□□□ -1.79
LRRC41-201ENST00000343304 KRTAP20-2Q3LI61 65 aa3.78□□□□□ -1.8
LRRC41-201ENST00000343304 KRTAP5-2Q701N4 177 aa3.75□□□□□ -1.81
LRRC41-201ENST00000343304 LCE1DQ5T752 114 aa3.75□□□□□ -1.81
LRRC41-201ENST00000343304 KRTAP4-6Q9BYQ5 205 aa3.74□□□□□ -1.81
LRRC41-201ENST00000343304 MT4P47944 62 aa3.73□□□□□ -1.81
LRRC41-201ENST00000343304 KRTAP5-3Q6L8H2 238 aa3.67□□□□□ -1.82
LRRC41-201ENST00000343304 HMCN1Q96RW7 5635 aa3.63□□□□□ -1.83
LRRC41-201ENST00000343304 LCE1EQ5T753 118 aa3.41□□□□□ -1.86
LRRC41-201ENST00000343304 KRTAP4-11Q9BYQ6 195 aa3.26□□□□□ -1.89
LRRC41-201ENST00000343304 AHNAK2Q8IVF2 5795 aa3.25□□□□□ -1.89
LRRC41-201ENST00000343304 MUC5ACP98088 5654 aa3.2□□□□□ -1.9
LRRC41-201ENST00000343304 KRTAP5-7Q6L8G8 165 aa3.2□□□□□ -1.9
LRRC41-201ENST00000343304 KRTAP5-8O75690 187 aa3.19□□□□□ -1.9
LRRC41-201ENST00000343304 KRTAP5-1Q6L8H4 278 aa3.19□□□□□ -1.9
LRRC41-201ENST00000343304 KRTAP5-10Q6L8G5 202 aa3.18□□□□□ -1.9
LRRC41-201ENST00000343304 LCE1CQ5T751 118 aa3.14□□□□□ -1.91
LRRC41-201ENST00000343304 LCE1BQ5T7P3 118 aa3.14□□□□□ -1.91
LRRC41-201ENST00000343304 LCE1FQ5T754 118 aa3.1□□□□□ -1.91
LRRC41-201ENST00000343304 KRTAP4-2Q9BYR5 136 aa3.05□□□□□ -1.92
LRRC41-201ENST00000343304 MUC19Q7Z5P9 8384 aa3□□□□□ -1.93
LRRC41-201ENST00000343304 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.99□□□□□ -1.93
LRRC41-201ENST00000343304 KRTAP9-9Q9BYP9 154 aa2.91□□□□□ -1.94
LRRC41-201ENST00000343304 GPR98Q8WXG9 6306 aa2.84□□□□□ -1.96
LRRC41-201ENST00000343304 KRTAP21-2Q3LI59 83 aa2.81□□□□□ -1.96
LRRC41-201ENST00000343304 KRTAP5-11Q6L8G4 156 aa2.77□□□□□ -1.97
LRRC41-201ENST00000343304 MUC5BQ9HC84 5762 aaPredicted RBP2.74□□□□□ -1.97
LRRC41-201ENST00000343304 KRTAP4-4Q9BYR3 166 aa2.71□□□□□ -1.98
LRRC41-201ENST00000343304 KRTAP4-12Q9BQ66 201 aa2.55□□□□□ -2
LRRC41-201ENST00000343304 KRTAP21-1Q3LI58 79 aa2.52□□□□□ -2.01
LRRC41-201ENST00000343304 AHNAKQ09666 5890 aaKnown RBP2.46□□□□□ -2.02
LRRC41-201ENST00000343304 PHGR1C9JFL3 82 aa2.35□□□□□ -2.03
LRRC41-201ENST00000343304 MUC16Q8WXI7 14507 aa1.55□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 68.9 ms