RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 MT1GP13640 62 aa4.84□□□□□ -1.63
CLCN1-201ENST00000343257 DSTQ03001 7570 aaKnown RBP4.84□□□□□ -1.64
CLCN1-201ENST00000343257 FCGBPQ9Y6R7 5405 aaPredicted RBP4.8□□□□□ -1.64
CLCN1-201ENST00000343257 MUC12Q9UKN1 5478 aa4.79□□□□□ -1.64
CLCN1-201ENST00000343257 SYNE1Q8NF91 8797 aaKnown RBP4.71□□□□□ -1.66
CLCN1-201ENST00000343257 SSPOA2VEC9 5147 aa4.69□□□□□ -1.66
CLCN1-201ENST00000343257 LCE2AQ5TA79 106 aaPredicted RBP4.67□□□□□ -1.66
CLCN1-201ENST00000343257 KRTAP4-9Q9BYQ8 210 aa4.67□□□□□ -1.66
CLCN1-201ENST00000343257 OBSCNQ5VST9 7968 aa4.62□□□□□ -1.67
CLCN1-201ENST00000343257 LCE3BQ5TA77 95 aa4.62□□□□□ -1.67
CLCN1-201ENST00000343257 KRTAP19-4Q3LI73 84 aa4.6□□□□□ -1.67
CLCN1-201ENST00000343257 LCE2DQ5TA82 110 aaPredicted RBP4.57□□□□□ -1.68
CLCN1-201ENST00000343257 MT1MQ8N339 61 aa4.55□□□□□ -1.68
CLCN1-201ENST00000343257 KRTAP19-3Q7Z4W3 81 aa4.47□□□□□ -1.69
CLCN1-201ENST00000343257 KRTAP9-7A8MTY7 169 aa4.43□□□□□ -1.7
CLCN1-201ENST00000343257 KRTAP9-2Q9BYQ4 174 aa4.41□□□□□ -1.7
CLCN1-201ENST00000343257 PRM1P04553 51 aa4.38□□□□□ -1.71
CLCN1-201ENST00000343257 SYNE2Q8WXH0 6885 aaKnown RBP4.35□□□□□ -1.71
CLCN1-201ENST00000343257 LCE3DQ9BYE3 92 aa4.32□□□□□ -1.72
CLCN1-201ENST00000343257 KRTAP19-6Q3LI70 58 aa4.31□□□□□ -1.72
CLCN1-201ENST00000343257 KRTAP6-1Q3LI64 71 aa4.3□□□□□ -1.72
CLCN1-201ENST00000343257 SPRR2FQ96RM1 72 aa4.29□□□□□ -1.72
CLCN1-201ENST00000343257 LCE3EQ5T5B0 92 aa4.27□□□□□ -1.73
CLCN1-201ENST00000343257 KRTAP5-5Q701N2 237 aaPredicted RBP4.27□□□□□ -1.73
CLCN1-201ENST00000343257 LCE5AQ5TCM9 118 aa4.22□□□□□ -1.73
CLCN1-201ENST00000343257 MT1AP04731 61 aa4.2□□□□□ -1.74
CLCN1-201ENST00000343257 KRTAP9-6A0A140TA67 174 aa4.17□□□□□ -1.74
CLCN1-201ENST00000343257 MDN1Q9NU22 5596 aa4.13□□□□□ -1.75
CLCN1-201ENST00000343257 MACF1Q9UPN3 7388 aaKnown RBP4.11□□□□□ -1.75
CLCN1-201ENST00000343257 KRTAP6-2Q3LI66 62 aa4.09□□□□□ -1.76
CLCN1-201ENST00000343257 KRTAP6-3Q3LI67 103 aa3.98□□□□□ -1.77
CLCN1-201ENST00000343257 LCE1AQ5T7P2 110 aa3.96□□□□□ -1.77
CLCN1-201ENST00000343257 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.88□□□□□ -1.79
CLCN1-201ENST00000343257 LCE1EQ5T753 118 aa3.86□□□□□ -1.79
CLCN1-201ENST00000343257 KRTAP9-4Q9BYQ2 154 aa3.82□□□□□ -1.8
CLCN1-201ENST00000343257 KRTAP2-2Q9BYT5 123 aa3.81□□□□□ -1.8
CLCN1-201ENST00000343257 SPRR2EP22531 72 aa3.73□□□□□ -1.81
CLCN1-201ENST00000343257 SPRR2BP35325 72 aa3.73□□□□□ -1.81
CLCN1-201ENST00000343257 SPRR2AP35326 72 aa3.73□□□□□ -1.81
CLCN1-201ENST00000343257 MT3P25713 68 aa3.67□□□□□ -1.82
CLCN1-201ENST00000343257 LCE1DQ5T752 114 aa3.65□□□□□ -1.83
CLCN1-201ENST00000343257 MUC19Q7Z5P9 8384 aa3.64□□□□□ -1.83
CLCN1-201ENST00000343257 KRTAP5-9P26371 169 aa3.57□□□□□ -1.84
CLCN1-201ENST00000343257 NEBP20929 6669 aa3.55□□□□□ -1.84
CLCN1-201ENST00000343257 SPRR2DP22532 72 aa3.53□□□□□ -1.85
CLCN1-201ENST00000343257 KRTAP4-11Q9BYQ6 195 aa3.35□□□□□ -1.87
CLCN1-201ENST00000343257 MUC5ACP98088 5654 aa3.3□□□□□ -1.88
CLCN1-201ENST00000343257 KRTAP20-1Q3LI63 56 aa3.3□□□□□ -1.88
CLCN1-201ENST00000343257 MT4P47944 62 aa3.29□□□□□ -1.88
CLCN1-201ENST00000343257 KRTAP4-6Q9BYQ5 205 aa3.29□□□□□ -1.88
CLCN1-201ENST00000343257 LCE1FQ5T754 118 aa3.24□□□□□ -1.89
CLCN1-201ENST00000343257 LCE1BQ5T7P3 118 aa3.16□□□□□ -1.9
CLCN1-201ENST00000343257 KRTAP5-4Q6L8H1 288 aa3.15□□□□□ -1.91
CLCN1-201ENST00000343257 KRTAP20-2Q3LI61 65 aa3.06□□□□□ -1.92
CLCN1-201ENST00000343257 KRTAP5-10Q6L8G5 202 aa3.04□□□□□ -1.92
CLCN1-201ENST00000343257 HMCN1Q96RW7 5635 aa3.03□□□□□ -1.92
CLCN1-201ENST00000343257 KRTAP5-2Q701N4 177 aa2.98□□□□□ -1.93
CLCN1-201ENST00000343257 LCE4AQ5TA78 99 aa2.88□□□□□ -1.95
CLCN1-201ENST00000343257 KRTAP5-1Q6L8H4 278 aa2.83□□□□□ -1.96
CLCN1-201ENST00000343257 KRTAP5-3Q6L8H2 238 aa2.81□□□□□ -1.96
CLCN1-201ENST00000343257 KRTAP4-4Q9BYR3 166 aa2.76□□□□□ -1.97
CLCN1-201ENST00000343257 KRTAP4-2Q9BYR5 136 aa2.74□□□□□ -1.97
CLCN1-201ENST00000343257 GPR98Q8WXG9 6306 aa2.72□□□□□ -1.97
CLCN1-201ENST00000343257 AHNAK2Q8IVF2 5795 aa2.72□□□□□ -1.97
CLCN1-201ENST00000343257 KRTAP9-9Q9BYP9 154 aa2.67□□□□□ -1.98
CLCN1-201ENST00000343257 KRTAP21-2Q3LI59 83 aa2.67□□□□□ -1.98
CLCN1-201ENST00000343257 LCE1CQ5T751 118 aa2.63□□□□□ -1.99
CLCN1-201ENST00000343257 KRTAP21-1Q3LI58 79 aa2.63□□□□□ -1.99
CLCN1-201ENST00000343257 KRTAP5-7Q6L8G8 165 aa2.43□□□□□ -2.02
CLCN1-201ENST00000343257 MUC5BQ9HC84 5762 aaPredicted RBP2.42□□□□□ -2.02
CLCN1-201ENST00000343257 KRTAP4-12Q9BQ66 201 aa2.42□□□□□ -2.02
CLCN1-201ENST00000343257 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.41□□□□□ -2.02
CLCN1-201ENST00000343257 KRTAP5-8O75690 187 aa2.39□□□□□ -2.03
CLCN1-201ENST00000343257 KRTAP5-11Q6L8G4 156 aa2.19□□□□□ -2.06
CLCN1-201ENST00000343257 AHNAKQ09666 5890 aaKnown RBP2.15□□□□□ -2.07
CLCN1-201ENST00000343257 PHGR1C9JFL3 82 aa1.94□□□□□ -2.1
CLCN1-201ENST00000343257 MUC16Q8WXI7 14507 aa1.45□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 124 ms