RNA–Protein interactions for RNA: ENST00000343115.8

RDX-201, Transcript of radixin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RDX, Length 4,491 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-201ENST00000343115 FCGBPQ9Y6R7 5405 aaPredicted RBP5.43□□□□□ -1.54
RDX-201ENST00000343115 KRTAP19-4Q3LI73 84 aa5.43□□□□□ -1.54
RDX-201ENST00000343115 LCE3BQ5TA77 95 aa5.42□□□□□ -1.54
RDX-201ENST00000343115 KRTAP4-3Q9BYR4 195 aa5.41□□□□□ -1.54
RDX-201ENST00000343115 KRTAP19-6Q3LI70 58 aa5.41□□□□□ -1.54
RDX-201ENST00000343115 LOC100996750A0A140TA64 210 aa5.38□□□□□ -1.55
RDX-201ENST00000343115 KRTAP12-4P60329 112 aa5.36□□□□□ -1.55
RDX-201ENST00000343115 SSPOA2VEC9 5147 aa5.35□□□□□ -1.55
RDX-201ENST00000343115 KRTAP9-6A8MVA2 160 aa5.34□□□□□ -1.55
RDX-201ENST00000343115 SPRR2EP22531 72 aa5.31□□□□□ -1.56
RDX-201ENST00000343115 SPRR2BP35325 72 aa5.31□□□□□ -1.56
RDX-201ENST00000343115 SPRR2AP35326 72 aa5.31□□□□□ -1.56
RDX-201ENST00000343115 KRTAP19-3Q7Z4W3 81 aa5.31□□□□□ -1.56
RDX-201ENST00000343115 SYNE2Q8WXH0 6885 aaKnown RBP5.29□□□□□ -1.56
RDX-201ENST00000343115 LCE2DQ5TA82 110 aaPredicted RBP5.25□□□□□ -1.57
RDX-201ENST00000343115 MUC12Q9UKN1 5478 aa5.23□□□□□ -1.57
RDX-201ENST00000343115 MT1MQ8N339 61 aa5.22□□□□□ -1.57
RDX-201ENST00000343115 MACF1Q9UPN3 7388 aaKnown RBP5.2□□□□□ -1.58
RDX-201ENST00000343115 SPRR2DP22532 72 aa5.09□□□□□ -1.59
RDX-201ENST00000343115 KRTAP2-3P0C7H8 128 aa5.09□□□□□ -1.6
RDX-201ENST00000343115 KRTAP2-4Q9BYR9 128 aa5.09□□□□□ -1.6
RDX-201ENST00000343115 KRTAP2-1Q9BYU5 128 aa5.09□□□□□ -1.6
RDX-201ENST00000343115 LCE3DQ9BYE3 92 aa5.01□□□□□ -1.61
RDX-201ENST00000343115 KRTAP4-9Q9BYQ8 210 aa4.99□□□□□ -1.61
RDX-201ENST00000343115 KRTAP9-6A0A140TA67 174 aa4.97□□□□□ -1.61
RDX-201ENST00000343115 LCE3EQ5T5B0 92 aa4.91□□□□□ -1.62
RDX-201ENST00000343115 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.79□□□□□ -1.64
RDX-201ENST00000343115 LCE5AQ5TCM9 118 aa4.76□□□□□ -1.65
RDX-201ENST00000343115 LCE1AQ5T7P2 110 aa4.74□□□□□ -1.65
RDX-201ENST00000343115 MDN1Q9NU22 5596 aa4.74□□□□□ -1.65
RDX-201ENST00000343115 KRTAP6-1Q3LI64 71 aa4.73□□□□□ -1.65
RDX-201ENST00000343115 KRTAP9-7A8MTY7 169 aa4.7□□□□□ -1.66
RDX-201ENST00000343115 PRM1P04553 51 aa4.7□□□□□ -1.66
RDX-201ENST00000343115 MT1AP04731 61 aa4.69□□□□□ -1.66
RDX-201ENST00000343115 MT4P47944 62 aa4.66□□□□□ -1.66
RDX-201ENST00000343115 KRTAP6-3Q3LI67 103 aa4.61□□□□□ -1.67
RDX-201ENST00000343115 MT3P25713 68 aa4.58□□□□□ -1.68
RDX-201ENST00000343115 KRTAP6-2Q3LI66 62 aa4.44□□□□□ -1.7
RDX-201ENST00000343115 KRTAP5-9P26371 169 aa4.43□□□□□ -1.7
RDX-201ENST00000343115 KRTAP9-4Q9BYQ2 154 aa4.35□□□□□ -1.71
RDX-201ENST00000343115 NEBP20929 6669 aa4.3□□□□□ -1.72
RDX-201ENST00000343115 LCE1DQ5T752 114 aa4.28□□□□□ -1.72
RDX-201ENST00000343115 KRTAP20-1Q3LI63 56 aa4.27□□□□□ -1.73
RDX-201ENST00000343115 LCE1BQ5T7P3 118 aa4.24□□□□□ -1.73
RDX-201ENST00000343115 KRTAP2-2Q9BYT5 123 aa4.15□□□□□ -1.74
RDX-201ENST00000343115 KRTAP4-6Q9BYQ5 205 aa4.1□□□□□ -1.75
RDX-201ENST00000343115 LCE4AQ5TA78 99 aa4.02□□□□□ -1.77
RDX-201ENST00000343115 KRTAP5-5Q701N2 237 aaPredicted RBP3.96□□□□□ -1.78
RDX-201ENST00000343115 MUC19Q7Z5P9 8384 aa3.92□□□□□ -1.78
RDX-201ENST00000343115 KRTAP20-2Q3LI61 65 aa3.83□□□□□ -1.8
RDX-201ENST00000343115 HMCN1Q96RW7 5635 aa3.71□□□□□ -1.82
RDX-201ENST00000343115 MUC5ACP98088 5654 aa3.63□□□□□ -1.83
RDX-201ENST00000343115 GPR98Q8WXG9 6306 aa3.59□□□□□ -1.83
RDX-201ENST00000343115 KRTAP4-11Q9BYQ6 195 aa3.59□□□□□ -1.83
RDX-201ENST00000343115 KRTAP5-4Q6L8H1 288 aa3.59□□□□□ -1.84
RDX-201ENST00000343115 KRTAP4-4Q9BYR3 166 aa3.31□□□□□ -1.88
RDX-201ENST00000343115 KRTAP5-3Q6L8H2 238 aa3.27□□□□□ -1.89
RDX-201ENST00000343115 AHNAK2Q8IVF2 5795 aa3.26□□□□□ -1.89
RDX-201ENST00000343115 KRTAP9-9Q9BYP9 154 aa3.24□□□□□ -1.89
RDX-201ENST00000343115 LCE1CQ5T751 118 aa3.23□□□□□ -1.89
RDX-201ENST00000343115 LCE1EQ5T753 118 aa3.23□□□□□ -1.89
RDX-201ENST00000343115 LCE1FQ5T754 118 aa3.23□□□□□ -1.89
RDX-201ENST00000343115 KRTAP5-2Q701N4 177 aa3.22□□□□□ -1.89
RDX-201ENST00000343115 KRTAP4-12Q9BQ66 201 aa3.21□□□□□ -1.9
RDX-201ENST00000343115 KRTAP4-2Q9BYR5 136 aa3.21□□□□□ -1.9
RDX-201ENST00000343115 KRTAP5-8O75690 187 aa3.05□□□□□ -1.92
RDX-201ENST00000343115 KRTAP5-10Q6L8G5 202 aa3.05□□□□□ -1.92
RDX-201ENST00000343115 MUC5BQ9HC84 5762 aaPredicted RBP2.99□□□□□ -1.93
RDX-201ENST00000343115 KRTAP5-1Q6L8H4 278 aa2.91□□□□□ -1.94
RDX-201ENST00000343115 KRTAP21-2Q3LI59 83 aa2.71□□□□□ -1.98
RDX-201ENST00000343115 AHNAKQ09666 5890 aaKnown RBP2.69□□□□□ -1.98
RDX-201ENST00000343115 KRTAP5-11Q6L8G4 156 aa2.53□□□□□ -2
RDX-201ENST00000343115 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.46□□□□□ -2.02
RDX-201ENST00000343115 KRTAP5-7Q6L8G8 165 aa2.4□□□□□ -2.03
RDX-201ENST00000343115 KRTAP21-1Q3LI58 79 aa2.34□□□□□ -2.04
RDX-201ENST00000343115 PHGR1C9JFL3 82 aa2.19□□□□□ -2.06
RDX-201ENST00000343115 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 8.2 ms